RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
GGA3-201ENST00000537686 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
GGA3-201ENST00000537686 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
GGA3-201ENST00000537686 ARID3AQ99856 593 aa12.23□□□□□ -0.45
GGA3-201ENST00000537686 FCHSD2O94868 740 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
GGA3-201ENST00000537686 SMC3Q9UQE7 1217 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 BECN2A8MW95 431 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
GGA3-201ENST00000537686 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
GGA3-201ENST00000537686 GNAI2P04899 355 aa12.21□□□□□ -0.45
GGA3-201ENST00000537686 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
GGA3-201ENST00000537686 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.45
GGA3-201ENST00000537686 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.45
GGA3-201ENST00000537686 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.45
GGA3-201ENST00000537686 VPS53Q5VIR6 699 aa12.21□□□□□ -0.46
GGA3-201ENST00000537686 NOL10Q9BSC4 688 aaKnown RBP12.21□□□□□ -0.46
GGA3-201ENST00000537686 PRDM11Q9NQV5 511 aa12.21□□□□□ -0.46
GGA3-201ENST00000537686 NUCB2P80303 420 aa12.21□□□□□ -0.46
GGA3-201ENST00000537686 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.46
GGA3-201ENST00000537686 FSD1Q9BTV5 496 aa12.21□□□□□ -0.46
GGA3-201ENST00000537686 PTPRTO14522 1441 aa12.2□□□□□ -0.46
GGA3-201ENST00000537686 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
GGA3-201ENST00000537686 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
GGA3-201ENST00000537686 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
GGA3-201ENST00000537686 MEX3CQ5U5Q3 659 aaKnown RBP12.2□□□□□ -0.46
GGA3-201ENST00000537686 TRIM29Q14134 588 aa12.2□□□□□ -0.46
GGA3-201ENST00000537686 MVPQ14764 893 aaKnown RBP12.2□□□□□ -0.46
GGA3-201ENST00000537686 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
GGA3-201ENST00000537686 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
GGA3-201ENST00000537686 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
GGA3-201ENST00000537686 DDX54Q8TDD1 881 aaKnown RBP12.2□□□□□ -0.46
GGA3-201ENST00000537686 SMG6Q86US8 1419 aaKnown RBP12.19□□□□□ -0.46
GGA3-201ENST00000537686 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
GGA3-201ENST00000537686 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
GGA3-201ENST00000537686 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
GGA3-201ENST00000537686 PRDM15P57071 1507 aaPredicted RBP12.19□□□□□ -0.46
GGA3-201ENST00000537686 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
GGA3-201ENST00000537686 RAD21O60216 631 aa12.19□□□□□ -0.46
GGA3-201ENST00000537686 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
GGA3-201ENST00000537686 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
GGA3-201ENST00000537686 NEK4P51957 841 aa12.19□□□□□ -0.46
GGA3-201ENST00000537686 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
GGA3-201ENST00000537686 SRCIN1Q9C0H9 1055 aa12.19□□□□□ -0.46
GGA3-201ENST00000537686 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
GGA3-201ENST00000537686 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
GGA3-201ENST00000537686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
GGA3-201ENST00000537686 NFXL1Q6ZNB6 911 aa12.18□□□□□ -0.46
GGA3-201ENST00000537686 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
GGA3-201ENST00000537686 TRPM2O94759 1503 aa12.17□□□□□ -0.46
GGA3-201ENST00000537686 FOSBP53539 338 aa12.17□□□□□ -0.46
GGA3-201ENST00000537686 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
GGA3-201ENST00000537686 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
GGA3-201ENST00000537686 NME9Q86XW9 330 aa12.17□□□□□ -0.46
GGA3-201ENST00000537686 MAGI2Q86UL8 1455 aa12.17□□□□□ -0.46
GGA3-201ENST00000537686 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
GGA3-201ENST00000537686 DHX16O60231 1041 aaKnown RBP12.16□□□□□ -0.46
GGA3-201ENST00000537686 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
GGA3-201ENST00000537686 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
GGA3-201ENST00000537686 UNC13BO14795 1591 aa12.16□□□□□ -0.46
GGA3-201ENST00000537686 CABP4P57796 275 aa12.16□□□□□ -0.46
GGA3-201ENST00000537686 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
GGA3-201ENST00000537686 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
GGA3-201ENST00000537686 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
GGA3-201ENST00000537686 MYL6BP14649 208 aa12.15□□□□□ -0.46
GGA3-201ENST00000537686 FBXW7Q969H0 707 aa12.15□□□□□ -0.46
GGA3-201ENST00000537686 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
GGA3-201ENST00000537686 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
GGA3-201ENST00000537686 SIL1Q9H173 461 aa12.15□□□□□ -0.46
GGA3-201ENST00000537686 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
GGA3-201ENST00000537686 COL17A1Q9UMD9 1497 aaPredicted RBP12.15□□□□□ -0.46
GGA3-201ENST00000537686 NINLQ9Y2I6 1382 aa12.15□□□□□ -0.46
GGA3-201ENST00000537686 MCM10Q7L590 875 aa12.15□□□□□ -0.47
GGA3-201ENST00000537686 ERICH2A1L162 156 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 ABCC3O15438 1527 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 FOXO3O43524 673 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 SSH1Q8WYL5 1049 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
GGA3-201ENST00000537686 FYB1O15117 783 aa12.13□□□□□ -0.47
GGA3-201ENST00000537686 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
GGA3-201ENST00000537686 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
GGA3-201ENST00000537686 C20orf194Q5TEA3 1177 aa12.13□□□□□ -0.47
GGA3-201ENST00000537686 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
GGA3-201ENST00000537686 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 TPM3P06753 285 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 KIF6Q6ZMV9 814 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 TET3O43151 1660 aa12.12□□□□□ -0.47
GGA3-201ENST00000537686 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
GGA3-201ENST00000537686 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms