RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 SNW1Q13573 536 aaKnown RBP13.91□□□□□ -0.18
POLR1B-216ENST00000537335 SPATA24Q86W54 205 aa13.91□□□□□ -0.18
POLR1B-216ENST00000537335 EBAG9O00559 213 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 MAGEC2Q9UBF1 373 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-216ENST00000537335 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 LIG1P18858 919 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 GSDMDP57764 484 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 SSFA2P28290 1259 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 JMYQ8N9B5 988 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.18
POLR1B-216ENST00000537335 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.18
POLR1B-216ENST00000537335 RSRC1Q96IZ7 334 aaKnown RBP13.9□□□□□ -0.18
POLR1B-216ENST00000537335 V9GYY5 206 aaPredicted RBP13.9□□□□□ -0.18
POLR1B-216ENST00000537335 SOGA1O94964 1423 aa13.89□□□□□ -0.19
POLR1B-216ENST00000537335 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
POLR1B-216ENST00000537335 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
POLR1B-216ENST00000537335 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
POLR1B-216ENST00000537335 NAA25Q14CX7 972 aa13.89□□□□□ -0.19
POLR1B-216ENST00000537335 ME1P48163 572 aa13.89□□□□□ -0.19
POLR1B-216ENST00000537335 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
POLR1B-216ENST00000537335 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
POLR1B-216ENST00000537335 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
POLR1B-216ENST00000537335 MAP2K2P36507 400 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 ANKRD62A6NC57 917 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 LARP1BQ659C4 914 aaKnown RBP13.88□□□□□ -0.19
POLR1B-216ENST00000537335 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
POLR1B-216ENST00000537335 SPECC1LQ69YQ0 1117 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 GOLIM4O00461 696 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 EPS15P42566 896 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
POLR1B-216ENST00000537335 TXLNAP40222 546 aa13.87□□□□□ -0.19
POLR1B-216ENST00000537335 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
POLR1B-216ENST00000537335 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
POLR1B-216ENST00000537335 LRSAM1Q6UWE0 723 aa13.87□□□□□ -0.19
POLR1B-216ENST00000537335 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
POLR1B-216ENST00000537335 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
POLR1B-216ENST00000537335 TERF2IPQ9NYB0 399 aa13.87□□□□□ -0.19
POLR1B-216ENST00000537335 GIGYF2Q6Y7W6 1299 aaKnown RBP13.86□□□□□ -0.19
POLR1B-216ENST00000537335 GOLGA6L9A6NEM1 432 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 ZSCAN23Q3MJ62 389 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 LRCH2Q5VUJ6 765 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 BAG4O95429 457 aaKnown RBP13.86□□□□□ -0.19
POLR1B-216ENST00000537335 TMX1Q9H3N1 280 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 NUP155O75694 1391 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
POLR1B-216ENST00000537335 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 VPS53Q5VIR6 699 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 FMNL3Q8IVF7 1028 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
POLR1B-216ENST00000537335 CCDC83Q8IWF9 413 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 ZNF830Q96NB3 372 aaPredicted RBP13.84□□□□□ -0.19
POLR1B-216ENST00000537335 CEP83Q9Y592 693 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 MCM6Q14566 821 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 IMMTQ16891 758 aaKnown RBP13.84□□□□□ -0.19
POLR1B-216ENST00000537335 UTP14CQ5TAP6 766 aaKnown RBP13.84□□□□□ -0.19
POLR1B-216ENST00000537335 SEPT6Q14141 434 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 CYP46A1Q9Y6A2 500 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 CAMK4Q16566 473 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
POLR1B-216ENST00000537335 ANKRD1Q15327 319 aa13.83□□□□□ -0.19
POLR1B-216ENST00000537335 NBPF11Q86T75 865 aa13.83□□□□□ -0.19
POLR1B-216ENST00000537335 SRRTQ9BXP5 876 aaKnown RBP13.83□□□□□ -0.19
POLR1B-216ENST00000537335 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.19
POLR1B-216ENST00000537335 RALYLQ86SE5 291 aaKnown RBP13.83□□□□□ -0.2
POLR1B-216ENST00000537335 KIF5BP33176 963 aa13.83□□□□□ -0.2
POLR1B-216ENST00000537335 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.2
POLR1B-216ENST00000537335 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
POLR1B-216ENST00000537335 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
POLR1B-216ENST00000537335 TOP1P11387 765 aaKnown RBP13.83□□□□□ -0.2
POLR1B-216ENST00000537335 MSL1Q68DK7 614 aa13.83□□□□□ -0.2
POLR1B-216ENST00000537335 TUBB4AP04350 444 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 CLNS1AP54105 237 aaKnown RBP13.82□□□□□ -0.2
POLR1B-216ENST00000537335 DMTNQ08495 405 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 TAF4BQ92750 862 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 ZSCAN31Q96LW9 406 aaPredicted RBP13.82□□□□□ -0.2
POLR1B-216ENST00000537335 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
POLR1B-216ENST00000537335 RAI14Q9P0K7 980 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 MYRIPQ8NFW9 859 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 BCAR3O75815 825 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 IFFO1Q0D2I5 559 aa13.82□□□□□ -0.2
POLR1B-216ENST00000537335 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
POLR1B-216ENST00000537335 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.29e-7■■□□□ 14
POLR1B-216ENST00000537335 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
POLR1B-216ENST00000537335 TTC12Q9H892 705 aaPredicted RBP13.81□□□□□ -0.2
POLR1B-216ENST00000537335 RIPK4P57078 832 aa13.81□□□□□ -0.2
POLR1B-216ENST00000537335 KANK1Q14678 1352 aa13.81□□□□□ -0.2
POLR1B-216ENST00000537335 CCDC113Q9H0I3 377 aa13.81□□□□□ -0.2
POLR1B-216ENST00000537335 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
POLR1B-216ENST00000537335 ATP2C2O75185 946 aa13.81□□□□□ -0.2
POLR1B-216ENST00000537335 CCDC121Q6ZUS5 278 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms