RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 CSPP1Q1MSJ5 1256 aa19.38■□□□□ 0.69
CHFR-213ENST00000536843 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.38■□□□□ 0.69
CHFR-213ENST00000536843 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
CHFR-213ENST00000536843 A0A0U1RQG5 324 aaPredicted RBP19.37■□□□□ 0.69
CHFR-213ENST00000536843 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
CHFR-213ENST00000536843 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
CHFR-213ENST00000536843 ABCC11Q96J66 1382 aa19.37■□□□□ 0.69
CHFR-213ENST00000536843 U2AF1L5P0DN76 240 aaPredicted RBP19.36■□□□□ 0.69
CHFR-213ENST00000536843 U2AF1Q01081 240 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHFR-213ENST00000536843 MCM5P33992 734 aa19.36■□□□□ 0.69
CHFR-213ENST00000536843 WDR63Q8IWG1 891 aa19.35■□□□□ 0.69
CHFR-213ENST00000536843 ALKQ9UM73 1620 aa19.35■□□□□ 0.69
CHFR-213ENST00000536843 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
CHFR-213ENST00000536843 DDX49Q9Y6V7 483 aaKnown RBP19.35■□□□□ 0.69
CHFR-213ENST00000536843 CDK19Q9BWU1 502 aa19.34■□□□□ 0.69
CHFR-213ENST00000536843 TERF2IPQ9NYB0 399 aa19.34■□□□□ 0.69
CHFR-213ENST00000536843 DMTNQ08495 405 aa19.34■□□□□ 0.69
CHFR-213ENST00000536843 ZKSCAN5Q9Y2L8 839 aa19.34■□□□□ 0.69
CHFR-213ENST00000536843 FYB1O15117 783 aa19.33■□□□□ 0.69
CHFR-213ENST00000536843 FGD1P98174 961 aa19.33■□□□□ 0.69
CHFR-213ENST00000536843 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.69
CHFR-213ENST00000536843 SPATA31D1Q6ZQQ2 1576 aa19.33■□□□□ 0.68
CHFR-213ENST00000536843 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
CHFR-213ENST00000536843 KIF2CQ99661 725 aa19.33■□□□□ 0.68
CHFR-213ENST00000536843 K7ELQ4 463 aaPredicted RBP19.32■□□□□ 0.68
CHFR-213ENST00000536843 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
CHFR-213ENST00000536843 BCL2L13Q9BXK5 485 aa19.32■□□□□ 0.68
CHFR-213ENST00000536843 CD163L1Q9NR16 1453 aa19.32■□□□□ 0.68
CHFR-213ENST00000536843 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
CHFR-213ENST00000536843 SSFA2P28290 1259 aa19.32■□□□□ 0.68
CHFR-213ENST00000536843 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
CHFR-213ENST00000536843 CCDC94Q9BW85 323 aaPredicted RBP19.31■□□□□ 0.68
CHFR-213ENST00000536843 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
CHFR-213ENST00000536843 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
CHFR-213ENST00000536843 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
CHFR-213ENST00000536843 WAPLQ7Z5K2 1190 aa19.3■□□□□ 0.68
CHFR-213ENST00000536843 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
CHFR-213ENST00000536843 HDGFL2Q7Z4V5 671 aaPredicted RBP19.29■□□□□ 0.68
CHFR-213ENST00000536843 ZSCAN23Q3MJ62 389 aa19.29■□□□□ 0.68
CHFR-213ENST00000536843 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
CHFR-213ENST00000536843 CD2BP2O95400 341 aaKnown RBP19.28■□□□□ 0.68
CHFR-213ENST00000536843 RIMS2Q9UQ26 1411 aa19.28■□□□□ 0.68
CHFR-213ENST00000536843 RBSNQ9H1K0 784 aa19.27■□□□□ 0.68
CHFR-213ENST00000536843 ZHX1Q9UKY1 873 aaPredicted RBP19.27■□□□□ 0.68
CHFR-213ENST00000536843 ZSCAN20P17040 1043 aaPredicted RBP19.27■□□□□ 0.68
CHFR-213ENST00000536843 NCBP3Q53F19 620 aaKnown RBP19.27■□□□□ 0.68
CHFR-213ENST00000536843 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
CHFR-213ENST00000536843 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
CHFR-213ENST00000536843 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
CHFR-213ENST00000536843 GAS2L2Q8NHY3 880 aa19.25■□□□□ 0.67
CHFR-213ENST00000536843 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
CHFR-213ENST00000536843 PRDM10Q9NQV6 1147 aa19.25■□□□□ 0.67
CHFR-213ENST00000536843 FOXD4L1Q9NU39 408 aa19.25■□□□□ 0.67
CHFR-213ENST00000536843 CCDC39Q9UFE4 941 aa19.25■□□□□ 0.67
CHFR-213ENST00000536843 NUCB1Q02818 461 aa19.24■□□□□ 0.67
CHFR-213ENST00000536843 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
CHFR-213ENST00000536843 MED14O60244 1454 aa19.24■□□□□ 0.67
CHFR-213ENST00000536843 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
CHFR-213ENST00000536843 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
CHFR-213ENST00000536843 LMBRD1Q9NUN5 540 aa19.23■□□□□ 0.67
CHFR-213ENST00000536843 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
CHFR-213ENST00000536843 NCLP19338 710 aaKnown RBP19.22■□□□□ 0.67
CHFR-213ENST00000536843 TMPOP42166 694 aaKnown RBP19.22■□□□□ 0.67
CHFR-213ENST00000536843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHFR-213ENST00000536843 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
CHFR-213ENST00000536843 TRIM35Q9UPQ4 493 aa19.21■□□□□ 0.67
CHFR-213ENST00000536843 DLC1Q96QB1 1528 aa19.21■□□□□ 0.67
CHFR-213ENST00000536843 TNRQ92752 1358 aa19.21■□□□□ 0.67
CHFR-213ENST00000536843 DIAPH1O60610 1272 aaKnown RBP19.21■□□□□ 0.67
CHFR-213ENST00000536843 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
CHFR-213ENST00000536843 NUCB2P80303 420 aa19.21■□□□□ 0.67
CHFR-213ENST00000536843 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
CHFR-213ENST00000536843 ARID3AQ99856 593 aa19.21■□□□□ 0.67
CHFR-213ENST00000536843 GTPBP4Q9BZE4 634 aaKnown RBP19.21■□□□□ 0.67
CHFR-213ENST00000536843 ANKRD26Q9UPS8 1709 aa19.2■□□□□ 0.66
CHFR-213ENST00000536843 TRIM27P14373 513 aa19.2■□□□□ 0.66
CHFR-213ENST00000536843 MCTP1Q6DN14 999 aa19.2■□□□□ 0.66
CHFR-213ENST00000536843 MYRIPQ8NFW9 859 aa19.2■□□□□ 0.66
CHFR-213ENST00000536843 FBLN1P23142 703 aa19.2■□□□□ 0.66
CHFR-213ENST00000536843 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
CHFR-213ENST00000536843 KIF20AO95235 890 aa19.19■□□□□ 0.66
CHFR-213ENST00000536843 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
CHFR-213ENST00000536843 ITPRIPQ8IWB1 547 aa19.18■□□□□ 0.66
CHFR-213ENST00000536843 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
CHFR-213ENST00000536843 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
CHFR-213ENST00000536843 METP08581 1390 aa19.17■□□□□ 0.66
CHFR-213ENST00000536843 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
CHFR-213ENST00000536843 RBM42Q9BTD8 480 aaKnown RBP19.17■□□□□ 0.66
CHFR-213ENST00000536843 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
CHFR-213ENST00000536843 LRSAM1Q6UWE0 723 aa19.16■□□□□ 0.66
CHFR-213ENST00000536843 ATF7IPQ6VMQ6 1270 aa19.16■□□□□ 0.66
CHFR-213ENST00000536843 TXNDC2Q86VQ3 553 aa19.16■□□□□ 0.66
CHFR-213ENST00000536843 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
CHFR-213ENST00000536843 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
CHFR-213ENST00000536843 SMC4Q9NTJ3 1288 aa19.16■□□□□ 0.66
CHFR-213ENST00000536843 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
CHFR-213ENST00000536843 WASLO00401 505 aaPredicted RBP19.15■□□□□ 0.66
CHFR-213ENST00000536843 GTF2F1P35269 517 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHFR-213ENST00000536843 PRIMPOLQ96LW4 560 aa19.15■□□□□ 0.66
CHFR-213ENST00000536843 C3P01024 1663 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms