RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 EN1Q05925 392 aaPredicted RBP20.1■□□□□ 0.81
RTN3P1-201ENST00000536295 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
RTN3P1-201ENST00000536295 NFAT5O94916 1531 aa20.1■□□□□ 0.81
RTN3P1-201ENST00000536295 USP47Q96K76 1375 aa20.09■□□□□ 0.81
RTN3P1-201ENST00000536295 CSB-PGBD3P0DP91 1061 aa20.09■□□□□ 0.81
RTN3P1-201ENST00000536295 EDC4Q6P2E9 1401 aaKnown RBP20.09■□□□□ 0.81
RTN3P1-201ENST00000536295 USP31Q70CQ4 1352 aa20.08■□□□□ 0.81
RTN3P1-201ENST00000536295 WDR17Q8IZU2 1322 aa20.08■□□□□ 0.81
RTN3P1-201ENST00000536295 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
RTN3P1-201ENST00000536295 SLC24A1O60721 1099 aa20.06■□□□□ 0.8
RTN3P1-201ENST00000536295 TNS1Q9HBL0 1735 aaKnown RBP20.06■□□□□ 0.8
RTN3P1-201ENST00000536295 PARP4Q9UKK3 1724 aaKnown RBP20.05■□□□□ 0.8
RTN3P1-201ENST00000536295 NINLQ9Y2I6 1382 aa20.05■□□□□ 0.8
RTN3P1-201ENST00000536295 APBA3O96018 575 aa20.04■□□□□ 0.8
RTN3P1-201ENST00000536295 TMF1P82094 1093 aa20.04■□□□□ 0.8
RTN3P1-201ENST00000536295 EZH2Q15910 746 aaKnown RBP20.03■□□□□ 0.8
RTN3P1-201ENST00000536295 DDB1Q16531 1140 aa20.03■□□□□ 0.8
RTN3P1-201ENST00000536295 USP54Q70EL1 1684 aa20.03■□□□□ 0.8
RTN3P1-201ENST00000536295 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
RTN3P1-201ENST00000536295 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.8
RTN3P1-201ENST00000536295 CARD10Q9BWT7 1032 aa20.02■□□□□ 0.8
RTN3P1-201ENST00000536295 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
RTN3P1-201ENST00000536295 LRRC37A3O60309 1634 aa20.02■□□□□ 0.79
RTN3P1-201ENST00000536295 DISP2A7MBM2 1401 aa20.02■□□□□ 0.79
RTN3P1-201ENST00000536295 OVOS2A0A0J9YW53 1432 aa20.01■□□□□ 0.79
RTN3P1-201ENST00000536295 OVOS2Q6IE36 1432 aa20.01■□□□□ 0.79
RTN3P1-201ENST00000536295 ABCC6O95255 1503 aa20■□□□□ 0.79
RTN3P1-201ENST00000536295 LTN1O94822 1766 aa19.99■□□□□ 0.79
RTN3P1-201ENST00000536295 CAMKK2Q96RR4 588 aa19.99■□□□□ 0.79
RTN3P1-201ENST00000536295 CDCA7Q9BWT1 371 aaPredicted RBP19.99■□□□□ 0.79
RTN3P1-201ENST00000536295 OVOS2A0A0G2JMS6 1433 aa19.99■□□□□ 0.79
RTN3P1-201ENST00000536295 ANKRD36BQ8N2N9 1353 aa19.98■□□□□ 0.79
RTN3P1-201ENST00000536295 WNK3Q9BYP7 1800 aa19.98■□□□□ 0.79
RTN3P1-201ENST00000536295 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
RTN3P1-201ENST00000536295 COG3Q96JB2 828 aa19.98■□□□□ 0.79
RTN3P1-201ENST00000536295 NLRP2Q9NX02 1062 aa19.98■□□□□ 0.79
RTN3P1-201ENST00000536295 ERBB3P21860 1342 aa19.98■□□□□ 0.79
RTN3P1-201ENST00000536295 ANKRD24Q8TF21 1146 aa19.97■□□□□ 0.79
RTN3P1-201ENST00000536295 SRCAPQ6ZRS2 3230 aa19.97■□□□□ 0.79
RTN3P1-201ENST00000536295 CCDC7Q96M83 1385 aa19.96■□□□□ 0.79
RTN3P1-201ENST00000536295 CDCA8Q53HL2 280 aa19.96■□□□□ 0.79
RTN3P1-201ENST00000536295 C11orf95C9JLR9 678 aaPredicted RBP19.95■□□□□ 0.78
RTN3P1-201ENST00000536295 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
RTN3P1-201ENST00000536295 MARCH10Q8NA82 808 aaPredicted RBP19.95■□□□□ 0.78
RTN3P1-201ENST00000536295 PEAK1Q9H792 1746 aa19.95■□□□□ 0.78
RTN3P1-201ENST00000536295 EXOC5O00471 708 aa19.94■□□□□ 0.78
RTN3P1-201ENST00000536295 FBLN1P23142 703 aa19.94■□□□□ 0.78
RTN3P1-201ENST00000536295 LTV1Q96GA3 475 aaPredicted RBP19.93■□□□□ 0.78
RTN3P1-201ENST00000536295 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
RTN3P1-201ENST00000536295 IP6K1Q92551 441 aa19.92■□□□□ 0.78
RTN3P1-201ENST00000536295 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
RTN3P1-201ENST00000536295 PTF1AQ7RTS3 328 aa19.91■□□□□ 0.78
RTN3P1-201ENST00000536295 MAP3K19Q56UN5 1328 aa19.91■□□□□ 0.78
RTN3P1-201ENST00000536295 FYB1O15117 783 aa19.9■□□□□ 0.78
RTN3P1-201ENST00000536295 IL2RBP14784 551 aa19.9■□□□□ 0.78
RTN3P1-201ENST00000536295 AMPHP49418 695 aa19.9■□□□□ 0.78
RTN3P1-201ENST00000536295 TNS2Q63HR2 1409 aa19.89■□□□□ 0.77
RTN3P1-201ENST00000536295 BCL11BQ9C0K0 894 aaPredicted RBP19.89■□□□□ 0.77
RTN3P1-201ENST00000536295 SBF2Q86WG5 1849 aa19.88■□□□□ 0.77
RTN3P1-201ENST00000536295 RREB1Q92766 1687 aa19.88■□□□□ 0.77
RTN3P1-201ENST00000536295 HOXC9P31274 260 aa19.88■□□□□ 0.77
RTN3P1-201ENST00000536295 RRS1Q15050 365 aaKnown RBP19.88■□□□□ 0.77
RTN3P1-201ENST00000536295 POLR3GLQ9BT43 218 aa19.88■□□□□ 0.77
RTN3P1-201ENST00000536295 NUP188Q5SRE5 1749 aa19.87■□□□□ 0.77
RTN3P1-201ENST00000536295 NBPF14Q5TI25 921 aa19.86■□□□□ 0.77
RTN3P1-201ENST00000536295 MYOM1P52179 1685 aa19.86■□□□□ 0.77
RTN3P1-201ENST00000536295 BCL9O00512 1426 aa19.85■□□□□ 0.77
RTN3P1-201ENST00000536295 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
RTN3P1-201ENST00000536295 NSD3Q9BZ95 1437 aa19.85■□□□□ 0.77
RTN3P1-201ENST00000536295 LRP5O75197 1615 aa19.84■□□□□ 0.77
RTN3P1-201ENST00000536295 PLSCR1O15162 318 aa19.84■□□□□ 0.77
RTN3P1-201ENST00000536295 ACSBG1Q96GR2 724 aa19.84■□□□□ 0.77
RTN3P1-201ENST00000536295 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.77
RTN3P1-201ENST00000536295 KCNQ2O43526 872 aa19.83■□□□□ 0.77
RTN3P1-201ENST00000536295 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
RTN3P1-201ENST00000536295 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
RTN3P1-201ENST00000536295 RTL1A6NKG5 1358 aa19.82■□□□□ 0.76
RTN3P1-201ENST00000536295 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
RTN3P1-201ENST00000536295 DDX54Q8TDD1 881 aaKnown RBP19.8■□□□□ 0.76
RTN3P1-201ENST00000536295 RGPD3A6NKT7 1758 aaPredicted RBP19.8■□□□□ 0.76
RTN3P1-201ENST00000536295 RGPD4Q7Z3J3 1758 aa19.8■□□□□ 0.76
RTN3P1-201ENST00000536295 PROM2Q8N271 834 aa19.78■□□□□ 0.76
RTN3P1-201ENST00000536295 USHBP1Q8N6Y0 703 aa19.78■□□□□ 0.76
RTN3P1-201ENST00000536295 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
RTN3P1-201ENST00000536295 SMG6Q86US8 1419 aaKnown RBP19.77■□□□□ 0.76
RTN3P1-201ENST00000536295 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.76
RTN3P1-201ENST00000536295 NBPF6Q5VWK0 638 aa19.77■□□□□ 0.76
RTN3P1-201ENST00000536295 NBPF4Q96M43 638 aa19.77■□□□□ 0.76
RTN3P1-201ENST00000536295 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
RTN3P1-201ENST00000536295 NHSQ6T4R5 1651 aa19.77■□□□□ 0.76
RTN3P1-201ENST00000536295 TXNRD1Q16881 649 aa19.76■□□□□ 0.75
RTN3P1-201ENST00000536295 EMILIN1Q9Y6C2 1016 aa19.76■□□□□ 0.75
RTN3P1-201ENST00000536295 CGNL1Q0VF96 1302 aa19.76■□□□□ 0.75
RTN3P1-201ENST00000536295 FLT4P35916 1363 aa19.75■□□□□ 0.75
RTN3P1-201ENST00000536295 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
RTN3P1-201ENST00000536295 MEGF6O75095 1541 aa19.75■□□□□ 0.75
RTN3P1-201ENST00000536295 INSRP06213 1382 aa19.74■□□□□ 0.75
RTN3P1-201ENST00000536295 ZCRB1Q8TBF4 217 aaKnown RBP19.73■□□□□ 0.75
RTN3P1-201ENST00000536295 RAPGEF4Q8WZA2 1011 aa19.72■□□□□ 0.75
RTN3P1-201ENST00000536295 KIF24Q5T7B8 1368 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms