RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PAPPAQ13219 1627 aa10.57□□□□□ -0.72
COL21A1-212ENST00000535941 APAF1O14727 1248 aa10.57□□□□□ -0.72
COL21A1-212ENST00000535941 RRP1P56182 461 aaKnown RBP10.57□□□□□ -0.72
COL21A1-212ENST00000535941 FLT4P35916 1363 aa10.57□□□□□ -0.72
COL21A1-212ENST00000535941 GOLGA2Q08379 1002 aa10.56□□□□□ -0.72
COL21A1-212ENST00000535941 GLI3P10071 1580 aa10.56□□□□□ -0.72
COL21A1-212ENST00000535941 E9PSI1 815 aa10.56□□□□□ -0.72
COL21A1-212ENST00000535941 DIAPH1O60610 1272 aaKnown RBP10.56□□□□□ -0.72
COL21A1-212ENST00000535941 COG3Q96JB2 828 aa10.56□□□□□ -0.72
COL21A1-212ENST00000535941 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
COL21A1-212ENST00000535941 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
COL21A1-212ENST00000535941 FKBP8Q14318 412 aa10.55□□□□□ -0.72
COL21A1-212ENST00000535941 CCDC146Q8IYE0 955 aa10.55□□□□□ -0.72
COL21A1-212ENST00000535941 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
COL21A1-212ENST00000535941 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
COL21A1-212ENST00000535941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL21A1-212ENST00000535941 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
COL21A1-212ENST00000535941 TMEM94Q12767 1356 aa10.54□□□□□ -0.72
COL21A1-212ENST00000535941 UBR2Q8IWV8 1755 aa10.54□□□□□ -0.72
COL21A1-212ENST00000535941 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
COL21A1-212ENST00000535941 COL16A1Q07092 1604 aaPredicted RBP10.53□□□□□ -0.72
COL21A1-212ENST00000535941 OVOS2A0A0G2JMS6 1433 aa10.53□□□□□ -0.72
COL21A1-212ENST00000535941 ZNF853P0CG23 659 aa10.53□□□□□ -0.72
COL21A1-212ENST00000535941 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
COL21A1-212ENST00000535941 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
COL21A1-212ENST00000535941 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
COL21A1-212ENST00000535941 CRB1P82279 1406 aa10.53□□□□□ -0.72
COL21A1-212ENST00000535941 PHF8Q9UPP1 1060 aa10.53□□□□□ -0.72
COL21A1-212ENST00000535941 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
COL21A1-212ENST00000535941 EIF4A2Q14240 407 aaKnown RBP10.52□□□□□ -0.72
COL21A1-212ENST00000535941 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
COL21A1-212ENST00000535941 CT47B1P0C2W7 299 aaPredicted RBP10.52□□□□□ -0.73
COL21A1-212ENST00000535941 FBLN1P23142 703 aa10.52□□□□□ -0.73
COL21A1-212ENST00000535941 ROBO1Q9Y6N7 1651 aa10.52□□□□□ -0.73
COL21A1-212ENST00000535941 MRC1P22897 1456 aa10.52□□□□□ -0.73
COL21A1-212ENST00000535941 TNNT2P45379 298 aaPredicted RBP10.51□□□□□ -0.73
COL21A1-212ENST00000535941 BRPF1P55201 1214 aaPredicted RBP10.51□□□□□ -0.73
COL21A1-212ENST00000535941 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
COL21A1-212ENST00000535941 PPP4R2Q9NY27 417 aa10.51□□□□□ -0.73
COL21A1-212ENST00000535941 LAMB4A4D0S4 1761 aa10.51□□□□□ -0.73
COL21A1-212ENST00000535941 PNNQ9H307 717 aaKnown RBP10.51□□□□□ -0.73
COL21A1-212ENST00000535941 MSH6P52701 1360 aa10.51□□□□□ -0.73
COL21A1-212ENST00000535941 CPDO75976 1380 aa10.49□□□□□ -0.73
COL21A1-212ENST00000535941 RRS1Q15050 365 aaKnown RBP10.49□□□□□ -0.73
COL21A1-212ENST00000535941 NFE2L2Q16236 605 aa10.49□□□□□ -0.73
COL21A1-212ENST00000535941 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
COL21A1-212ENST00000535941 C5P01031 1676 aa10.48□□□□□ -0.73
COL21A1-212ENST00000535941 PHACTR3Q96KR7 559 aa10.48□□□□□ -0.73
COL21A1-212ENST00000535941 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
COL21A1-212ENST00000535941 COL14A1Q05707 1796 aaKnown RBP10.48□□□□□ -0.73
COL21A1-212ENST00000535941 U2AF1L5P0DN76 240 aaPredicted RBP10.48□□□□□ -0.73
COL21A1-212ENST00000535941 HOXC9P31274 260 aa10.48□□□□□ -0.73
COL21A1-212ENST00000535941 U2AF1Q01081 240 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL21A1-212ENST00000535941 CICQ96RK0 1608 aaPredicted RBP10.48□□□□□ -0.73
COL21A1-212ENST00000535941 TUBGCP6Q96RT7 1819 aa10.48□□□□□ -0.73
COL21A1-212ENST00000535941 TOGARAM1Q9Y4F4 1720 aa10.47□□□□□ -0.73
COL21A1-212ENST00000535941 PLPPR3Q6T4P5 718 aa10.47□□□□□ -0.73
COL21A1-212ENST00000535941 NEFLP07196 543 aa10.46□□□□□ -0.73
COL21A1-212ENST00000535941 UBE2Q2Q8WVN8 375 aa10.46□□□□□ -0.73
COL21A1-212ENST00000535941 KDM2BQ8NHM5 1336 aa10.46□□□□□ -0.73
COL21A1-212ENST00000535941 NWD2Q9ULI1 1742 aa10.46□□□□□ -0.74
COL21A1-212ENST00000535941 PRKAR2BP31323 418 aa10.46□□□□□ -0.74
COL21A1-212ENST00000535941 CEMIPQ8WUJ3 1361 aa10.46□□□□□ -0.74
COL21A1-212ENST00000535941 RARSP54136 660 aaKnown RBP10.45□□□□□ -0.74
COL21A1-212ENST00000535941 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
COL21A1-212ENST00000535941 ORAI2Q96SN7 254 aa10.45□□□□□ -0.74
COL21A1-212ENST00000535941 RGS12O14924 1447 aa10.45□□□□□ -0.74
COL21A1-212ENST00000535941 IP6K1Q92551 441 aa10.45□□□□□ -0.74
COL21A1-212ENST00000535941 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
COL21A1-212ENST00000535941 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
COL21A1-212ENST00000535941 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
COL21A1-212ENST00000535941 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
COL21A1-212ENST00000535941 DAXXQ9UER7 740 aaPredicted RBP10.45□□□□□ -0.74
COL21A1-212ENST00000535941 KIAA0232Q92628 1395 aa10.44□□□□□ -0.74
COL21A1-212ENST00000535941 ARHGEF25Q86VW2 580 aa10.44□□□□□ -0.74
COL21A1-212ENST00000535941 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
COL21A1-212ENST00000535941 PHLPP1O60346 1717 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 LRP6O75581 1613 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 SENP3-EIF4A1A0A087X0R7 540 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
COL21A1-212ENST00000535941 KCNH5Q8NCM2 988 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 MYH16Q9H6N6 1097 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 PDE3AQ14432 1141 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
COL21A1-212ENST00000535941 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.43□□□□□ -0.74
COL21A1-212ENST00000535941 NUTM2FA1L443 756 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 HTATSF1O43719 755 aaKnown RBP10.42□□□□□ -0.74
COL21A1-212ENST00000535941 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 EYA1Q99502 592 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
COL21A1-212ENST00000535941 SPATA31A3Q5VYP0 1347 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 HSPA2P54652 639 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 RIPK4P57078 832 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
COL21A1-212ENST00000535941 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
COL21A1-212ENST00000535941 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
COL21A1-212ENST00000535941 PKNOX2Q96KN3 472 aa10.41□□□□□ -0.74
COL21A1-212ENST00000535941 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
COL21A1-212ENST00000535941 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms