RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 CHD1LQ86WJ1 897 aa15.2■□□□□ 0.02
VPS45-211ENST00000535106 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
VPS45-211ENST00000535106 FAM83GA6ND36 823 aa15.19■□□□□ 0.02
VPS45-211ENST00000535106 RRAGDQ9NQL2 400 aaPredicted RBP15.19■□□□□ 0.02
VPS45-211ENST00000535106 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 SETD1AO15047 1707 aaKnown RBP15.18■□□□□ 0.02
VPS45-211ENST00000535106 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
VPS45-211ENST00000535106 SIRT2Q8IXJ6 389 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 C8orf58Q8NAV2 365 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 NUDT16Q96DE0 195 aaKnown RBP15.18■□□□□ 0.02
VPS45-211ENST00000535106 ZMYND15Q9H091 742 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 IFT57Q9NWB7 429 aa15.18■□□□□ 0.02
VPS45-211ENST00000535106 GNAI1P63096 354 aa15.17■□□□□ 0.02
VPS45-211ENST00000535106 DCTN1Q14203 1278 aa15.17■□□□□ 0.02
VPS45-211ENST00000535106 CPS1P31327 1500 aa15.16■□□□□ 0.02
VPS45-211ENST00000535106 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
VPS45-211ENST00000535106 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
VPS45-211ENST00000535106 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
VPS45-211ENST00000535106 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
VPS45-211ENST00000535106 PIK3R4Q99570 1358 aa15.16■□□□□ 0.02
VPS45-211ENST00000535106 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
VPS45-211ENST00000535106 TWISTNBQ3B726 338 aaPredicted RBP15.15■□□□□ 0.02
VPS45-211ENST00000535106 COG3Q96JB2 828 aa15.15■□□□□ 0.02
VPS45-211ENST00000535106 NRXN3Q9Y4C0 1643 aa15.15■□□□□ 0.02
VPS45-211ENST00000535106 AGLP35573 1532 aa15.14■□□□□ 0.01
VPS45-211ENST00000535106 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
VPS45-211ENST00000535106 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
VPS45-211ENST00000535106 TSPOAP1O95153 1857 aa15.14■□□□□ 0.01
VPS45-211ENST00000535106 AATKQ6ZMQ8 1374 aa15.14■□□□□ 0.01
VPS45-211ENST00000535106 CDK12Q9NYV4 1490 aaPredicted RBP15.14■□□□□ 0.01
VPS45-211ENST00000535106 ABCC4O15439 1325 aa15.14■□□□□ 0.01
VPS45-211ENST00000535106 CCDC61Q9Y6R9 512 aa15.14■□□□□ 0.01
VPS45-211ENST00000535106 MCM4P33991 863 aa15.13■□□□□ 0.01
VPS45-211ENST00000535106 RBM25P49756 843 aaKnown RBP15.13■□□□□ 0.01
VPS45-211ENST00000535106 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
VPS45-211ENST00000535106 PRR36Q9H6K5 1346 aa15.13■□□□□ 0.01
VPS45-211ENST00000535106 BMP2KLQ5H9B9 411 aa15.12■□□□□ 0.01
VPS45-211ENST00000535106 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
VPS45-211ENST00000535106 CHMP5Q9NZZ3 219 aa15.12■□□□□ 0.01
VPS45-211ENST00000535106 DIP2BQ9P265 1576 aa15.12■□□□□ 0.01
VPS45-211ENST00000535106 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
VPS45-211ENST00000535106 REREQ9P2R6 1566 aa15.11■□□□□ 0.01
VPS45-211ENST00000535106 HSCBQ8IWL3 235 aa15.11■□□□□ 0.01
VPS45-211ENST00000535106 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
VPS45-211ENST00000535106 ARXQ96QS3 562 aa15.1■□□□□ 0.01
VPS45-211ENST00000535106 KIF2CQ99661 725 aa15.1■□□□□ 0.01
VPS45-211ENST00000535106 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.1■□□□□ 0.01
VPS45-211ENST00000535106 DDIT3P35638 169 aa15.09■□□□□ 0.01
VPS45-211ENST00000535106 GZF1Q9H116 711 aaPredicted RBP15.09■□□□□ 0.01
VPS45-211ENST00000535106 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
VPS45-211ENST00000535106 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
VPS45-211ENST00000535106 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
VPS45-211ENST00000535106 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
VPS45-211ENST00000535106 NUTM2FA1L443 756 aa15.08■□□□□ 0
VPS45-211ENST00000535106 CD2BP2O95400 341 aaKnown RBP15.08■□□□□ 0
VPS45-211ENST00000535106 SULT6B1Q6IMI4 303 aa15.08■□□□□ 0
VPS45-211ENST00000535106 SNX21Q969T3 373 aa15.08■□□□□ 0
VPS45-211ENST00000535106 CHMP4BQ9H444 224 aaKnown RBP15.08■□□□□ 0
VPS45-211ENST00000535106 API5Q9BZZ5 524 aaKnown RBP15.07■□□□□ 0
VPS45-211ENST00000535106 NCOA3Q9Y6Q9 1424 aa15.07■□□□□ 0
VPS45-211ENST00000535106 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
VPS45-211ENST00000535106 MCM10Q7L590 875 aa15.06■□□□□ 0
VPS45-211ENST00000535106 SIRT1Q96EB6 747 aa15.06■□□□□ 0
VPS45-211ENST00000535106 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
VPS45-211ENST00000535106 TECPR2O15040 1411 aa15.06■□□□□ 0
VPS45-211ENST00000535106 MON2Q7Z3U7 1717 aa15.06■□□□□ 0
VPS45-211ENST00000535106 GSPT1P15170 499 aaKnown RBP15.05■□□□□ 0
VPS45-211ENST00000535106 C3P01024 1663 aa15.05■□□□□ -0
VPS45-211ENST00000535106 TRAK2O60296 914 aa15.05■□□□□ -0
VPS45-211ENST00000535106 TTC21BQ7Z4L5 1316 aa15.04■□□□□ -0
VPS45-211ENST00000535106 HSP90AB2PQ58FF8 381 aa15.04■□□□□ -0
VPS45-211ENST00000535106 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
VPS45-211ENST00000535106 KNDC1Q76NI1 1749 aa15.04■□□□□ -0
VPS45-211ENST00000535106 PLEKHM2Q8IWE5 1019 aa15.04■□□□□ -0
VPS45-211ENST00000535106 NAP1L5Q96NT1 182 aaPredicted RBP15.04■□□□□ -0
VPS45-211ENST00000535106 ACEP12821 1306 aa15.03■□□□□ -0
VPS45-211ENST00000535106 CHL1O00533 1208 aa15.03■□□□□ -0
VPS45-211ENST00000535106 XRCC6P12956 609 aaKnown RBP eCLIP15.03■□□□□ -0
VPS45-211ENST00000535106 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
VPS45-211ENST00000535106 ESF1Q9H501 851 aaKnown RBP15.03■□□□□ -0
VPS45-211ENST00000535106 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
VPS45-211ENST00000535106 RGS12O14924 1447 aa15.03■□□□□ -0
VPS45-211ENST00000535106 FSD2A1L4K1 749 aa15.03■□□□□ -0
VPS45-211ENST00000535106 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
VPS45-211ENST00000535106 DCTPP1Q9H773 170 aa15.03■□□□□ -0
VPS45-211ENST00000535106 SOX12O15370 315 aa15.02■□□□□ -0
VPS45-211ENST00000535106 HSP90AB1P08238 724 aaKnown RBP15.02■□□□□ -0
VPS45-211ENST00000535106 L1TD1Q5T7N2 865 aaKnown RBP15.02■□□□□ -0
VPS45-211ENST00000535106 OTUD7AQ8TE49 926 aaPredicted RBP15.02□□□□□ -0.01
VPS45-211ENST00000535106 TNPO1Q92973 898 aaKnown RBP15.02□□□□□ -0.01
VPS45-211ENST00000535106 AKAP12Q02952 1782 aa15.02□□□□□ -0.01
VPS45-211ENST00000535106 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
VPS45-211ENST00000535106 TMEM2Q9UHN6 1383 aa15.01□□□□□ -0.01
VPS45-211ENST00000535106 GOLGA6L3A6NEY3 463 aa15.01□□□□□ -0.01
VPS45-211ENST00000535106 HDGFP51858 240 aaKnown RBP15.01□□□□□ -0.01
VPS45-211ENST00000535106 TNRQ92752 1358 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms