RNA–Protein interactions for RNA: ENST00000534726.5

SNX19-213, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-213ENST00000534726 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
SNX19-213ENST00000534726 ARHGEF10O15013 1369 aa18.66■□□□□ 0.58
SNX19-213ENST00000534726 MARF1Q9Y4F3 1742 aaKnown RBP18.65■□□□□ 0.58
SNX19-213ENST00000534726 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
SNX19-213ENST00000534726 USP19O94966 1318 aa18.65■□□□□ 0.58
SNX19-213ENST00000534726 PHRF1Q9P1Y6 1649 aaKnown RBP18.65■□□□□ 0.58
SNX19-213ENST00000534726 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
SNX19-213ENST00000534726 SLAIN2Q9P270 581 aa18.64■□□□□ 0.57
SNX19-213ENST00000534726 SLIT3O75094 1523 aa18.64■□□□□ 0.57
SNX19-213ENST00000534726 IP6K1Q92551 441 aa18.63■□□□□ 0.57
SNX19-213ENST00000534726 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
SNX19-213ENST00000534726 HOXC9P31274 260 aa18.63■□□□□ 0.57
SNX19-213ENST00000534726 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
SNX19-213ENST00000534726 PEAK1Q9H792 1746 aa18.62■□□□□ 0.57
SNX19-213ENST00000534726 GCP02774 474 aa18.62■□□□□ 0.57
SNX19-213ENST00000534726 RIPK4P57078 832 aa18.62■□□□□ 0.57
SNX19-213ENST00000534726 NFAT5O94916 1531 aa18.61■□□□□ 0.57
SNX19-213ENST00000534726 KDRP35968 1356 aa18.61■□□□□ 0.57
SNX19-213ENST00000534726 SENP3-EIF4A1A0A087X0R7 540 aa18.61■□□□□ 0.57
SNX19-213ENST00000534726 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
SNX19-213ENST00000534726 RGPD1P0DJD0 1748 aa18.61■□□□□ 0.57
SNX19-213ENST00000534726 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
SNX19-213ENST00000534726 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
SNX19-213ENST00000534726 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
SNX19-213ENST00000534726 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
SNX19-213ENST00000534726 HMOX1P09601 288 aa18.59■□□□□ 0.57
SNX19-213ENST00000534726 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
SNX19-213ENST00000534726 BRINP3Q76B58 766 aa18.59■□□□□ 0.57
SNX19-213ENST00000534726 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
SNX19-213ENST00000534726 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
SNX19-213ENST00000534726 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
SNX19-213ENST00000534726 SOX12O15370 315 aa18.58■□□□□ 0.57
SNX19-213ENST00000534726 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.56
SNX19-213ENST00000534726 SPATA31A3Q5VYP0 1347 aa18.58■□□□□ 0.56
SNX19-213ENST00000534726 PXDNQ92626 1479 aa18.57■□□□□ 0.56
SNX19-213ENST00000534726 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
SNX19-213ENST00000534726 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
SNX19-213ENST00000534726 LMOD2Q6P5Q4 547 aa18.56■□□□□ 0.56
SNX19-213ENST00000534726 ABCC6O95255 1503 aa18.56■□□□□ 0.56
SNX19-213ENST00000534726 LTN1O94822 1766 aa18.55■□□□□ 0.56
SNX19-213ENST00000534726 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
SNX19-213ENST00000534726 PHACTR3Q96KR7 559 aa18.55■□□□□ 0.56
SNX19-213ENST00000534726 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
SNX19-213ENST00000534726 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
SNX19-213ENST00000534726 EYA1Q99502 592 aa18.54■□□□□ 0.56
SNX19-213ENST00000534726 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
SNX19-213ENST00000534726 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
SNX19-213ENST00000534726 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
SNX19-213ENST00000534726 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
SNX19-213ENST00000534726 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
SNX19-213ENST00000534726 GNAI1P63096 354 aa18.52■□□□□ 0.56
SNX19-213ENST00000534726 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
SNX19-213ENST00000534726 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
SNX19-213ENST00000534726 CPDO75976 1380 aa18.51■□□□□ 0.55
SNX19-213ENST00000534726 HAP1P54257 671 aaPredicted RBP18.5■□□□□ 0.55
SNX19-213ENST00000534726 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
SNX19-213ENST00000534726 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
SNX19-213ENST00000534726 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
SNX19-213ENST00000534726 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
SNX19-213ENST00000534726 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
SNX19-213ENST00000534726 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
SNX19-213ENST00000534726 NHSL1Q5SYE7 1610 aa18.46■□□□□ 0.55
SNX19-213ENST00000534726 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
SNX19-213ENST00000534726 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
SNX19-213ENST00000534726 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
SNX19-213ENST00000534726 DLG5Q8TDM6 1919 aa18.44■□□□□ 0.54
SNX19-213ENST00000534726 MS4A1P11836 297 aa18.44■□□□□ 0.54
SNX19-213ENST00000534726 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
SNX19-213ENST00000534726 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
SNX19-213ENST00000534726 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
SNX19-213ENST00000534726 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
SNX19-213ENST00000534726 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
SNX19-213ENST00000534726 AAMPQ13685 434 aa18.43■□□□□ 0.54
SNX19-213ENST00000534726 ERBB3P21860 1342 aa18.42■□□□□ 0.54
SNX19-213ENST00000534726 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
SNX19-213ENST00000534726 ALDH1L2Q3SY69 923 aa18.42■□□□□ 0.54
SNX19-213ENST00000534726 NBPF6Q5VWK0 638 aa18.42■□□□□ 0.54
SNX19-213ENST00000534726 LTV1Q96GA3 475 aaPredicted RBP18.42■□□□□ 0.54
SNX19-213ENST00000534726 NBPF4Q96M43 638 aa18.42■□□□□ 0.54
SNX19-213ENST00000534726 CRYBG1Q9Y4K1 1723 aa18.42■□□□□ 0.54
SNX19-213ENST00000534726 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
SNX19-213ENST00000534726 ZC3H6P61129 1189 aaKnown RBP18.41■□□□□ 0.54
SNX19-213ENST00000534726 PLEKHO1Q53GL0 409 aaPredicted RBP18.41■□□□□ 0.54
SNX19-213ENST00000534726 FAM208AQ9UK61 1670 aaKnown RBP18.41■□□□□ 0.54
SNX19-213ENST00000534726 CAMTA1Q9Y6Y1 1673 aa18.41■□□□□ 0.54
SNX19-213ENST00000534726 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
SNX19-213ENST00000534726 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
SNX19-213ENST00000534726 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
SNX19-213ENST00000534726 CHL1O00533 1208 aa18.39■□□□□ 0.53
SNX19-213ENST00000534726 TOM1O60784 492 aa18.39■□□□□ 0.53
SNX19-213ENST00000534726 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.53
SNX19-213ENST00000534726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
SNX19-213ENST00000534726 AHDC1Q5TGY3 1603 aaPredicted RBP18.39■□□□□ 0.53
SNX19-213ENST00000534726 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
SNX19-213ENST00000534726 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
SNX19-213ENST00000534726 AXIN2Q9Y2T1 843 aa18.38■□□□□ 0.53
SNX19-213ENST00000534726 COL18A1P39060 1754 aa18.38■□□□□ 0.53
SNX19-213ENST00000534726 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
SNX19-213ENST00000534726 KIAA0232Q92628 1395 aa18.37■□□□□ 0.53
SNX19-213ENST00000534726 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms