RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 DEPDC4Q8N2C3 294 aa5.68□□□□□ -1.5
ME3-211ENST00000534638 EMID1Q96A84 441 aaPredicted RBP5.68□□□□□ -1.5
ME3-211ENST00000534638 IRX2Q9BZI1 471 aaPredicted RBP5.68□□□□□ -1.5
ME3-211ENST00000534638 FCF1Q9Y324 198 aaKnown RBP5.68□□□□□ -1.5
ME3-211ENST00000534638 SOWAHDA6NJG2 315 aa5.67□□□□□ -1.5
ME3-211ENST00000534638 TCF3P15923 654 aa5.67□□□□□ -1.5
ME3-211ENST00000534638 MMP16P51512 607 aa5.67□□□□□ -1.5
ME3-211ENST00000534638 LIAT1Q6ZQX7 453 aa5.67□□□□□ -1.5
ME3-211ENST00000534638 USP17L3A6NCW0 530 aa5.66□□□□□ -1.5
ME3-211ENST00000534638 USP17L4A6NCW7 530 aa5.66□□□□□ -1.5
ME3-211ENST00000534638 PER1O15534 1290 aaPredicted RBP5.66□□□□□ -1.5
ME3-211ENST00000534638 DXOO77932 396 aaKnown RBP5.66□□□□□ -1.5
ME3-211ENST00000534638 ELOAQ14241 798 aaKnown RBP5.66□□□□□ -1.5
ME3-211ENST00000534638 CRTC2Q53ET0 693 aaPredicted RBP5.66□□□□□ -1.5
ME3-211ENST00000534638 USP17L2Q6R6M4 530 aa5.66□□□□□ -1.5
ME3-211ENST00000534638 USP17L1Q7RTZ2 530 aa5.66□□□□□ -1.5
ME3-211ENST00000534638 BIN2Q9UBW5 565 aaPredicted RBP5.66□□□□□ -1.5
ME3-211ENST00000534638 USP17L15C9J2P7 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L10C9JJH3 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L13C9JLJ4 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L12C9JPN9 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L11C9JVI0 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L21D6R901 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L18D6R9N7 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L22D6RA61 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L17D6RBQ6 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L19D6RCP7 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L20D6RJB6 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 SKIP12755 728 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 JUNDP17535 347 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 SSFA2P28290 1259 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 MARSP56192 900 aaKnown RBP5.65□□□□□ -1.5
ME3-211ENST00000534638 EIF4G2P78344 907 aaKnown RBP eCLIP5.65□□□□□ -1.5
ME3-211ENST00000534638 USP17L24Q0WX57 530 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 SPRYD7Q5W111 196 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 CCDC24Q8N4L8 307 aa5.65□□□□□ -1.5
ME3-211ENST00000534638 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
ME3-211ENST00000534638 USP17L5A8MUK1 530 aa5.64□□□□□ -1.51
ME3-211ENST00000534638 ARID4AP29374 1257 aaPredicted RBP5.64□□□□□ -1.51
ME3-211ENST00000534638 TAGLNQ01995 201 aaKnown RBP5.64□□□□□ -1.51
ME3-211ENST00000534638 ZNF598Q86UK7 904 aaKnown RBP5.64□□□□□ -1.51
ME3-211ENST00000534638 FAM174AQ8TBP5 190 aa5.64□□□□□ -1.51
ME3-211ENST00000534638 ZBTB24O43167 697 aaPredicted RBP5.63□□□□□ -1.51
ME3-211ENST00000534638 GFRA3O60609 400 aa5.63□□□□□ -1.51
ME3-211ENST00000534638 FBXO45P0C2W1 286 aa5.63□□□□□ -1.51
ME3-211ENST00000534638 RPIAP49247 311 aa5.63□□□□□ -1.51
ME3-211ENST00000534638 ZNF697Q5TEC3 545 aa5.63□□□□□ -1.51
ME3-211ENST00000534638 NPAS4Q8IUM7 802 aa5.63□□□□□ -1.51
ME3-211ENST00000534638 SIRT1Q96EB6 747 aa5.63□□□□□ -1.51
ME3-211ENST00000534638 CD2BP2O95400 341 aaKnown RBP5.62□□□□□ -1.51
ME3-211ENST00000534638 ERCC3P19447 782 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 ATP2B4P23634 1241 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 FAM69CQ0P6D2 419 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 NR1H3Q13133 447 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 PNMA1Q8ND90 353 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 NUDT12Q9BQG2 462 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
ME3-211ENST00000534638 PDZRN3Q9UPQ7 1066 aa5.62□□□□□ -1.51
ME3-211ENST00000534638 FAM196BA6NMK8 535 aa5.61□□□□□ -1.51
ME3-211ENST00000534638 ZNF211Q13398 564 aaPredicted RBP5.61□□□□□ -1.51
ME3-211ENST00000534638 LAPTM4AQ15012 233 aa5.61□□□□□ -1.51
ME3-211ENST00000534638 CCDC125Q86Z20 511 aa5.61□□□□□ -1.51
ME3-211ENST00000534638 ANO2Q9NQ90 1003 aa5.61□□□□□ -1.51
ME3-211ENST00000534638 MKRN1Q9UHC7 482 aaKnown RBP5.61□□□□□ -1.51
ME3-211ENST00000534638 SMARCA5O60264 1052 aaPredicted RBP5.6□□□□□ -1.51
ME3-211ENST00000534638 RECKO95980 971 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 ABL1P00519 1130 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 RASA1P20936 1047 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 PTK7Q13308 1070 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 NCOA4Q13772 614 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 PTPRNQ16849 979 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 DESI1Q6ICB0 168 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 TRIM67Q6ZTA4 783 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 FAM200AQ8TCP9 573 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 SREK1Q8WXA9 508 aaKnown RBP5.6□□□□□ -1.51
ME3-211ENST00000534638 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 CHMP4AQ9BY43 222 aa5.6□□□□□ -1.51
ME3-211ENST00000534638 NRG2O14511 850 aaPredicted RBP5.59□□□□□ -1.51
ME3-211ENST00000534638 GDF9O60383 454 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 CCNYL3P0C7X3 344 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 KCNH2Q12809 1159 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 FOXC1Q12948 553 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 TRIM32Q13049 653 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 PTCRAQ6ISU1 281 aaPredicted RBP5.59□□□□□ -1.51
ME3-211ENST00000534638 LARP1Q6PKG0 1096 aaKnown RBP5.59□□□□□ -1.51
ME3-211ENST00000534638 LYPD8Q6UX82 237 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 PLEKHM2Q8IWE5 1019 aa5.59□□□□□ -1.51
ME3-211ENST00000534638 CLP1Q92989 425 aaKnown RBP5.59□□□□□ -1.51
ME3-211ENST00000534638 ZNF594Q96JF6 807 aaPredicted RBP5.59□□□□□ -1.51
ME3-211ENST00000534638 ZBBXA8MT70 800 aa5.58□□□□□ -1.52
ME3-211ENST00000534638 H3BRB1 525 aa5.58□□□□□ -1.52
ME3-211ENST00000534638 TNFRSF10AO00220 468 aa5.58□□□□□ -1.52
ME3-211ENST00000534638 PPM1GO15355 546 aaPredicted RBP5.58□□□□□ -1.52
ME3-211ENST00000534638 Q6ZNB5 142 aa5.58□□□□□ -1.52
ME3-211ENST00000534638 TUT1Q9H6E5 874 aaKnown RBP5.58□□□□□ -1.52
ME3-211ENST00000534638 EVA1BQ9NVM1 165 aa5.58□□□□□ -1.52
ME3-211ENST00000534638 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
ME3-211ENST00000534638 PRMT3O60678 531 aa5.57□□□□□ -1.52
ME3-211ENST00000534638 LGR5O75473 907 aa5.57□□□□□ -1.52
ME3-211ENST00000534638 PRR20EP86478 221 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms