RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SKAP1Q86WV1 359 aa15.22■□□□□ 0.03
ATM-222ENST00000533733 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
ATM-222ENST00000533733 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
ATM-222ENST00000533733 TRIM27P14373 513 aa15.21■□□□□ 0.03
ATM-222ENST00000533733 BCL2L13Q9BXK5 485 aa15.21■□□□□ 0.03
ATM-222ENST00000533733 EID1Q9Y6B2 187 aa15.21■□□□□ 0.03
ATM-222ENST00000533733 OVOS2A0A0J9YW53 1432 aa15.2■□□□□ 0.02
ATM-222ENST00000533733 OVOS2Q6IE36 1432 aa15.2■□□□□ 0.02
ATM-222ENST00000533733 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
ATM-222ENST00000533733 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
ATM-222ENST00000533733 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
ATM-222ENST00000533733 NME9Q86XW9 330 aa15.2■□□□□ 0.02
ATM-222ENST00000533733 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
ATM-222ENST00000533733 RGPD1P0DJD0 1748 aa15.19■□□□□ 0.02
ATM-222ENST00000533733 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
ATM-222ENST00000533733 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
ATM-222ENST00000533733 TTC21AQ8NDW8 1320 aa15.18■□□□□ 0.02
ATM-222ENST00000533733 USP6P35125 1406 aa15.18■□□□□ 0.02
ATM-222ENST00000533733 ZNF853P0CG23 659 aa15.18■□□□□ 0.02
ATM-222ENST00000533733 NBR1Q14596 966 aa15.18■□□□□ 0.02
ATM-222ENST00000533733 NOB1Q9ULX3 412 aaKnown RBP15.18■□□□□ 0.02
ATM-222ENST00000533733 EMILIN1Q9Y6C2 1016 aa15.18■□□□□ 0.02
ATM-222ENST00000533733 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 TBX22Q9Y458 520 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 KIF24Q5T7B8 1368 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 USP31Q70CQ4 1352 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 BECN1Q14457 450 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
ATM-222ENST00000533733 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
ATM-222ENST00000533733 PRR36Q9H6K5 1346 aa15.16■□□□□ 0.02
ATM-222ENST00000533733 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
ATM-222ENST00000533733 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
ATM-222ENST00000533733 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
ATM-222ENST00000533733 ADRA2BP18089 450 aa15.14■□□□□ 0.01
ATM-222ENST00000533733 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
ATM-222ENST00000533733 SSH2Q76I76 1423 aa15.14■□□□□ 0.01
ATM-222ENST00000533733 ANKARQ7Z5J8 1434 aa15.14■□□□□ 0.01
ATM-222ENST00000533733 VAMP4O75379 141 aa15.14■□□□□ 0.01
ATM-222ENST00000533733 HMOX1P09601 288 aa15.13■□□□□ 0.01
ATM-222ENST00000533733 THEMISQ8N1K5 641 aaPredicted RBP15.13■□□□□ 0.01
ATM-222ENST00000533733 TMEM57Q8N5G2 664 aa15.13■□□□□ 0.01
ATM-222ENST00000533733 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
ATM-222ENST00000533733 ACEP12821 1306 aa15.13■□□□□ 0.01
ATM-222ENST00000533733 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
ATM-222ENST00000533733 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
ATM-222ENST00000533733 USP19O94966 1318 aa15.12■□□□□ 0.01
ATM-222ENST00000533733 PTPRUQ92729 1446 aa15.12■□□□□ 0.01
ATM-222ENST00000533733 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
ATM-222ENST00000533733 EIF5BO60841 1220 aaKnown RBP15.12■□□□□ 0.01
ATM-222ENST00000533733 LTKP29376 864 aa15.12■□□□□ 0.01
ATM-222ENST00000533733 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
ATM-222ENST00000533733 GCC1Q96CN9 775 aa15.11■□□□□ 0.01
ATM-222ENST00000533733 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
ATM-222ENST00000533733 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
ATM-222ENST00000533733 ABCC4O15439 1325 aa15.1■□□□□ 0.01
ATM-222ENST00000533733 RRS1Q15050 365 aaKnown RBP15.09■□□□□ 0.01
ATM-222ENST00000533733 TWISTNBQ3B726 338 aaPredicted RBP15.09■□□□□ 0.01
ATM-222ENST00000533733 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
ATM-222ENST00000533733 LAS1LQ9Y4W2 734 aaKnown RBP15.09■□□□□ 0.01
ATM-222ENST00000533733 RGPD8O14715 1765 aaPredicted RBP15.09■□□□□ 0.01
ATM-222ENST00000533733 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
ATM-222ENST00000533733 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
ATM-222ENST00000533733 SBNO1A3KN83 1393 aa15.09■□□□□ 0.01
ATM-222ENST00000533733 CACNA1FO60840 1977 aa15.08■□□□□ 0.01
ATM-222ENST00000533733 FLT4P35916 1363 aa15.08■□□□□ 0
ATM-222ENST00000533733 AMOTL2Q9Y2J4 779 aa15.08■□□□□ 0
ATM-222ENST00000533733 FBLN1P23142 703 aa15.07■□□□□ 0
ATM-222ENST00000533733 NUCB1Q02818 461 aa15.07■□□□□ 0
ATM-222ENST00000533733 PIK3C2AO00443 1686 aa15.07■□□□□ 0
ATM-222ENST00000533733 NCKAP5LQ9HCH0 1330 aa15.06■□□□□ 0
ATM-222ENST00000533733 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
ATM-222ENST00000533733 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
ATM-222ENST00000533733 CEP170BQ9Y4F5 1589 aaPredicted RBP15.06■□□□□ 0
ATM-222ENST00000533733 KDRP35968 1356 aa15.06■□□□□ 0
ATM-222ENST00000533733 CHD2O14647 1828 aaKnown RBP15.04■□□□□ -0
ATM-222ENST00000533733 NFKBIBQ15653 356 aa15.04■□□□□ -0
ATM-222ENST00000533733 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
ATM-222ENST00000533733 PTPRCP08575 1304 aa15.04■□□□□ -0
ATM-222ENST00000533733 CHL1O00533 1208 aa15.03■□□□□ -0
ATM-222ENST00000533733 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
ATM-222ENST00000533733 CHD1LQ86WJ1 897 aa15.03■□□□□ -0
ATM-222ENST00000533733 LRRC37A3O60309 1634 aa15.03■□□□□ -0
ATM-222ENST00000533733 SOS1Q07889 1333 aaPredicted RBP15.03■□□□□ -0
ATM-222ENST00000533733 SEC24BO95487 1268 aa15.03■□□□□ -0
ATM-222ENST00000533733 SLC26A8Q96RN1 970 aa15.03■□□□□ -0
ATM-222ENST00000533733 MARF1Q9Y4F3 1742 aaKnown RBP15.02■□□□□ -0
ATM-222ENST00000533733 TSPYL6Q8N831 410 aa15.02□□□□□ -0.01
ATM-222ENST00000533733 THUMPD2Q9BTF0 503 aaKnown RBP15.02□□□□□ -0.01
ATM-222ENST00000533733 BMP2KLQ5H9B9 411 aa15.01□□□□□ -0.01
ATM-222ENST00000533733 INTS3Q68E01 1043 aaKnown RBP15.01□□□□□ -0.01
ATM-222ENST00000533733 NGDNQ8NEJ9 315 aaKnown RBP15.01□□□□□ -0.01
ATM-222ENST00000533733 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
ATM-222ENST00000533733 C8orf58Q8NAV2 365 aa15□□□□□ -0.01
ATM-222ENST00000533733 RTL1A6NKG5 1358 aa15□□□□□ -0.01
ATM-222ENST00000533733 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
ATM-222ENST00000533733 CRB1P82279 1406 aa15□□□□□ -0.01
ATM-222ENST00000533733 N4BP2Q86UW6 1770 aaPredicted RBP15□□□□□ -0.01
ATM-222ENST00000533733 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms