RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, human

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-215	ENST00000533657	MAP3K19	Q56UN5	1328 aa		13.78	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	CFAP53	Q96M91	514 aa		13.77	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	PIP4K2B	P78356	416 aa		13.77	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	SPATA31A6	Q5VVP1	1343 aa		13.77	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	EIF5B	O60841	1220 aa	Known RBP	13.77	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	MTHFS	P49914	203 aa		13.77	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	IP6K1	Q92551	441 aa		13.75	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	WNK3	Q9BYP7	1800 aa		13.74	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	PNISR	Q8TF01	805 aa	Known RBP	13.74	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	HOXC9	P31274	260 aa		13.74	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	ERICH6B	Q5W0A0	696 aa		13.74	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	MRS2	Q9HD23	443 aa		13.74	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	EMILIN1	Q9Y6C2	1016 aa		13.74	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	NUTM2G	Q5VZR2	741 aa		13.73	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	RRS1	Q15050	365 aa	Known RBP	13.72	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	CCDC184	Q52MB2	194 aa		13.72	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	FBXO41	Q8TF61	875 aa		13.72	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	KIAA0232	Q92628	1395 aa		13.72	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	RGPD2	P0DJD1	1756 aa		13.72	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	IL13	P35225	146 aa		13.71	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	LMOD2	Q6P5Q4	547 aa		13.71	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	TNNT2	P45379	298 aa	Predicted RBP	13.71	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	COL5A2	P05997	1499 aa	Predicted RBP	13.71	□□□□□ -0.21
CAPRIN1-215	ENST00000533657	SLIT2	O94813	1529 aa		13.71	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	KDR	P35968	1356 aa		13.71	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	DIAPH1	O60610	1272 aa	Known RBP	13.71	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	RBM19	Q9Y4C8	960 aa	Known RBP	13.71	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	LRP6	O75581	1613 aa		13.7	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	HSPA1L	P34931	641 aa		13.7	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	AMPH	P49418	695 aa		13.7	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	PARP4	Q9UKK3	1724 aa	Known RBP	13.7	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	NUDC	Q9Y266	331 aa		13.69	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	IGSF1	Q8N6C5	1336 aa		13.69	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	NCBP3	Q53F19	620 aa	Known RBP	13.69	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	PKD1L3	Q7Z443	1732 aa		13.69	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	EIF4A2	Q14240	407 aa	Known RBP	13.68	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	FBLN1	P23142	703 aa		13.68	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	CABLES1	Q8TDN4	633 aa		13.68	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	ERBB3	P21860	1342 aa		13.67	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	CNGB1	Q14028	1251 aa	Predicted RBP	13.67	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	SALL2	Q9Y467	1007 aa	Predicted RBP	13.67	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	HSP90AB2P	Q58FF8	381 aa		13.66	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	WDR43	Q15061	677 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	PNN	Q9H307	717 aa	Known RBP	13.66	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	DEK	P35659	375 aa	Known RBP	13.65	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	PRDM11	Q9NQV5	511 aa		13.65	□□□□□ -0.22
CAPRIN1-215	ENST00000533657	FCHSD2	O94868	740 aa		13.64	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	ZC3H6	P61129	1189 aa	Known RBP	13.64	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	NGEF	Q8N5V2	710 aa		13.64	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	WDR17	Q8IZU2	1322 aa		13.64	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	HAP1	P54257	671 aa	Predicted RBP	13.64	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	AXIN2	Q9Y2T1	843 aa		13.64	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	ADAMTS7	Q9UKP4	1686 aa		13.63	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	SOX12	O15370	315 aa		13.63	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	ANKRD24	Q8TF21	1146 aa		13.63	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	CRB1	P82279	1406 aa		13.63	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	FAM83G	A6ND36	823 aa		13.63	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	RSPH6A	Q9H0K4	717 aa		13.63	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	PPM1G	O15355	546 aa	Predicted RBP	13.62	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	SHANK3	Q9BYB0	1731 aa		13.62	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	PLEKHF1	Q96S99	279 aa		13.62	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	ADAMTS8	Q9UP79	889 aa		13.62	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.61	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	DAXX	Q9UER7	740 aa	Predicted RBP	13.61	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	DLG5	Q8TDM6	1919 aa		13.61	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	EYA1	Q99502	592 aa		13.61	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	LRRC37A3	O60309	1634 aa		13.61	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	DISP2	A7MBM2	1401 aa		13.6	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	BCL9L	Q86UU0	1499 aa		13.6	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	RUNDC1	Q96C34	613 aa		13.6	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	CARD10	Q9BWT7	1032 aa		13.6	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	THSD7A	Q9UPZ6	1657 aa		13.59	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.59	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	MSH5	O43196	834 aa		13.59	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	CHRNA2	Q15822	529 aa		13.59	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	VIRMA	Q69YN4	1812 aa	Known RBP	13.58	□□□□□ -0.23
CAPRIN1-215	ENST00000533657	OVOS2	A0A0G2JMS6	1433 aa		13.58	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	ATRN	O75882	1429 aa		13.58	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	NBPF6	Q5VWK0	638 aa		13.58	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	CCDC136	Q96JN2	1154 aa		13.58	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	NBPF4	Q96M43	638 aa		13.58	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	U2SURP	O15042	1029 aa	Known RBP	13.57	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	FAM9B	Q8IZU0	186 aa		13.57	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	BTG4	Q9NY30	223 aa		13.57	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	5e-13	■□□□□ 9.9
CAPRIN1-215	ENST00000533657	THRAP3	Q9Y2W1	955 aa	Known RBP	13.57	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	CCDC27	Q2M243	656 aa		13.56	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	PHF23	Q9BUL5	403 aa	Predicted RBP	13.56	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	MEGF6	O75095	1541 aa		13.56	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	SULT6B1	Q6IMI4	303 aa		13.55	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	UNC5CL	Q8IV45	518 aa		13.55	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	GLI3	P10071	1580 aa		13.55	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	VPS72	Q15906	364 aa		13.55	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	ZBTB7C	A1YPR0	619 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	SIPA1L3	O60292	1781 aa	Predicted RBP	13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	SCN11A	Q9UI33	1791 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	SPATA31A5	Q5VU36	1347 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	ZBED9	Q6R2W3	1325 aa		13.54	□□□□□ -0.24
CAPRIN1-215	ENST00000533657	SPATA31A7	Q8IWB4	1347 aa		13.54	□□□□□ -0.24

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