RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
CDC27-210ENST00000533415 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
CDC27-210ENST00000533415 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.43
CDC27-210ENST00000533415 INSRP06213 1382 aa17.7■□□□□ 0.42
CDC27-210ENST00000533415 BRINP3Q76B58 766 aa17.7■□□□□ 0.42
CDC27-210ENST00000533415 HOXC9P31274 260 aa17.69■□□□□ 0.42
CDC27-210ENST00000533415 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
CDC27-210ENST00000533415 PDE3BQ13370 1112 aa17.69■□□□□ 0.42
CDC27-210ENST00000533415 LRRC59Q96AG4 307 aaKnown RBP17.68■□□□□ 0.42
CDC27-210ENST00000533415 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
CDC27-210ENST00000533415 GCP02774 474 aa17.67■□□□□ 0.42
CDC27-210ENST00000533415 EYA1Q99502 592 aa17.67■□□□□ 0.42
CDC27-210ENST00000533415 FCHSD2O94868 740 aa17.67■□□□□ 0.42
CDC27-210ENST00000533415 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
CDC27-210ENST00000533415 C20orf194Q5TEA3 1177 aa17.66■□□□□ 0.42
CDC27-210ENST00000533415 BCAR3O75815 825 aa17.65■□□□□ 0.42
CDC27-210ENST00000533415 CHRNA2Q15822 529 aa17.65■□□□□ 0.42
CDC27-210ENST00000533415 AXIN2Q9Y2T1 843 aa17.65■□□□□ 0.42
CDC27-210ENST00000533415 SBNO1A3KN83 1393 aa17.65■□□□□ 0.42
CDC27-210ENST00000533415 FLT4P35916 1363 aa17.64■□□□□ 0.42
CDC27-210ENST00000533415 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
CDC27-210ENST00000533415 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
CDC27-210ENST00000533415 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
CDC27-210ENST00000533415 E9PSI1 815 aa17.62■□□□□ 0.41
CDC27-210ENST00000533415 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
CDC27-210ENST00000533415 MCM10Q7L590 875 aa17.62■□□□□ 0.41
CDC27-210ENST00000533415 NFE2L2Q16236 605 aa17.61■□□□□ 0.41
CDC27-210ENST00000533415 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
CDC27-210ENST00000533415 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
CDC27-210ENST00000533415 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
CDC27-210ENST00000533415 NFAT5O94916 1531 aa17.6■□□□□ 0.41
CDC27-210ENST00000533415 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
CDC27-210ENST00000533415 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
CDC27-210ENST00000533415 LTN1O94822 1766 aa17.59■□□□□ 0.41
CDC27-210ENST00000533415 NEFMP07197 916 aa17.59■□□□□ 0.41
CDC27-210ENST00000533415 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
CDC27-210ENST00000533415 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
CDC27-210ENST00000533415 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
CDC27-210ENST00000533415 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.41
CDC27-210ENST00000533415 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.41
CDC27-210ENST00000533415 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.41
CDC27-210ENST00000533415 DCCP43146 1447 aa17.58■□□□□ 0.4
CDC27-210ENST00000533415 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
CDC27-210ENST00000533415 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
CDC27-210ENST00000533415 IP6K1Q92551 441 aa17.58■□□□□ 0.4
CDC27-210ENST00000533415 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
CDC27-210ENST00000533415 MED1Q15648 1581 aaPredicted RBP17.58■□□□□ 0.4
CDC27-210ENST00000533415 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
CDC27-210ENST00000533415 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
CDC27-210ENST00000533415 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
CDC27-210ENST00000533415 PXDNQ92626 1479 aa17.56■□□□□ 0.4
CDC27-210ENST00000533415 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 ANKRD24Q8TF21 1146 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 FRAT1Q92837 279 aaPredicted RBP17.55■□□□□ 0.4
CDC27-210ENST00000533415 SPATA31A3Q5VYP0 1347 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 USP19O94966 1318 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
CDC27-210ENST00000533415 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
CDC27-210ENST00000533415 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
CDC27-210ENST00000533415 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
CDC27-210ENST00000533415 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
CDC27-210ENST00000533415 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
CDC27-210ENST00000533415 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
CDC27-210ENST00000533415 KIAA0232Q92628 1395 aa17.52■□□□□ 0.4
CDC27-210ENST00000533415 ALS2Q96Q42 1657 aa17.52■□□□□ 0.39
CDC27-210ENST00000533415 HAP1P54257 671 aaPredicted RBP17.52■□□□□ 0.39
CDC27-210ENST00000533415 ARHGEF10O15013 1369 aa17.52■□□□□ 0.39
CDC27-210ENST00000533415 RGPD5Q99666 1765 aa17.51■□□□□ 0.39
CDC27-210ENST00000533415 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
CDC27-210ENST00000533415 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
CDC27-210ENST00000533415 SLIT3O75094 1523 aa17.5■□□□□ 0.39
CDC27-210ENST00000533415 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
CDC27-210ENST00000533415 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
CDC27-210ENST00000533415 CSB-PGBD3P0DP91 1061 aa17.49■□□□□ 0.39
CDC27-210ENST00000533415 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
CDC27-210ENST00000533415 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
CDC27-210ENST00000533415 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
CDC27-210ENST00000533415 SOS2Q07890 1332 aaPredicted RBP17.49■□□□□ 0.39
CDC27-210ENST00000533415 NGEFQ8N5V2 710 aa17.48■□□□□ 0.39
CDC27-210ENST00000533415 KDRP35968 1356 aa17.47■□□□□ 0.39
CDC27-210ENST00000533415 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
CDC27-210ENST00000533415 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
CDC27-210ENST00000533415 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
CDC27-210ENST00000533415 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
CDC27-210ENST00000533415 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
CDC27-210ENST00000533415 LTBP4Q8N2S1 1624 aa17.46■□□□□ 0.38
CDC27-210ENST00000533415 SSH1Q8WYL5 1049 aa17.45■□□□□ 0.38
CDC27-210ENST00000533415 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
CDC27-210ENST00000533415 STRN4Q9NRL3 753 aa17.45■□□□□ 0.38
CDC27-210ENST00000533415 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
CDC27-210ENST00000533415 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
CDC27-210ENST00000533415 ERBB3P21860 1342 aa17.45■□□□□ 0.38
CDC27-210ENST00000533415 RLBP1P12271 317 aa17.44■□□□□ 0.38
CDC27-210ENST00000533415 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
CDC27-210ENST00000533415 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
CDC27-210ENST00000533415 IL17REQ8NFR9 667 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms