RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
BDNF-216ENST00000532997 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
BDNF-216ENST00000532997 PRPF40AO75400 957 aaKnown RBP11.48□□□□□ -0.57
BDNF-216ENST00000532997 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
BDNF-216ENST00000532997 HS1BP3Q53T59 392 aa11.47□□□□□ -0.57
BDNF-216ENST00000532997 SLC4A10Q6U841 1118 aa11.47□□□□□ -0.57
BDNF-216ENST00000532997 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
BDNF-216ENST00000532997 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
BDNF-216ENST00000532997 ATP6V1DQ9Y5K8 247 aa11.46□□□□□ -0.57
BDNF-216ENST00000532997 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
BDNF-216ENST00000532997 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
BDNF-216ENST00000532997 TTC22Q5TAA0 569 aa11.46□□□□□ -0.57
BDNF-216ENST00000532997 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
BDNF-216ENST00000532997 BRPF1P55201 1214 aaPredicted RBP11.46□□□□□ -0.58
BDNF-216ENST00000532997 MCM5P33992 734 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 PDCL3Q9H2J4 239 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 CD109Q6YHK3 1445 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 VAMP4O75379 141 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 DEPDC5O75140 1603 aa11.45□□□□□ -0.58
BDNF-216ENST00000532997 NEK4P51957 841 aa11.44□□□□□ -0.58
BDNF-216ENST00000532997 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
BDNF-216ENST00000532997 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
BDNF-216ENST00000532997 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
BDNF-216ENST00000532997 IDI1Q13907 227 aa11.44□□□□□ -0.58
BDNF-216ENST00000532997 TSPY26PQ9H489 355 aa11.44□□□□□ -0.58
BDNF-216ENST00000532997 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
BDNF-216ENST00000532997 NPATQ14207 1427 aa11.44□□□□□ -0.58
BDNF-216ENST00000532997 ADGRB3O60242 1522 aa11.44□□□□□ -0.58
BDNF-216ENST00000532997 CCT4P50991 539 aaKnown RBP11.43□□□□□ -0.58
BDNF-216ENST00000532997 RILPL2Q969X0 211 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 THUMPD2Q9BTF0 503 aaKnown RBP11.43□□□□□ -0.58
BDNF-216ENST00000532997 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 FAM13BQ9NYF5 915 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 KIF24Q5T7B8 1368 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 ASXL2Q76L83 1435 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.43□□□□□ -0.58
BDNF-216ENST00000532997 MYO3AQ8NEV4 1616 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 ANO2Q9NQ90 1003 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
BDNF-216ENST00000532997 DCTPP1Q9H773 170 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 USP32Q8NFA0 1604 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 INO80Q9ULG1 1556 aaPredicted RBP11.43□□□□□ -0.58
BDNF-216ENST00000532997 NRXN1Q9ULB1 1477 aa11.43□□□□□ -0.58
BDNF-216ENST00000532997 PTPRCP08575 1304 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 GNAI3P08754 354 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 LMTK2Q8IWU2 1503 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 LETM1O95202 739 aaPredicted RBP11.42□□□□□ -0.58
BDNF-216ENST00000532997 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
BDNF-216ENST00000532997 NOL8Q76FK4 1167 aaKnown RBP11.42□□□□□ -0.58
BDNF-216ENST00000532997 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 ZNF445P59923 1031 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 ZSCAN23Q3MJ62 389 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 PPP1R9BQ96SB3 815 aa11.42□□□□□ -0.58
BDNF-216ENST00000532997 OFD1O75665 1012 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 FAM184AQ8NB25 1140 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
BDNF-216ENST00000532997 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
BDNF-216ENST00000532997 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 TERF1P54274 439 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 GNAI2P04899 355 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 PLEKHM2Q8IWE5 1019 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 SRCIN1Q9C0H9 1055 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 WDR33Q9C0J8 1336 aaKnown RBP11.41□□□□□ -0.58
BDNF-216ENST00000532997 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
BDNF-216ENST00000532997 HDAC5Q9UQL6 1122 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 ABCC4O15439 1325 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 KCNJ4P48050 445 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
BDNF-216ENST00000532997 POLKQ9UBT6 870 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 ERCC6L2Q5T890 1561 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 CFAP74Q9C0B2 1584 aa11.4□□□□□ -0.58
BDNF-216ENST00000532997 REREQ9P2R6 1566 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 LRSAM1Q6UWE0 723 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 USP26Q9BXU7 913 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 GLI2P10070 1586 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 NCOA3Q9Y6Q9 1424 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 RNF214Q8ND24 703 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 LRRCC1Q9C099 1032 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 YTHDC2Q9H6S0 1430 aaKnown RBP11.39□□□□□ -0.59
BDNF-216ENST00000532997 MED14O60244 1454 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 GPATCH3Q96I76 525 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 EMILIN1Q9Y6C2 1016 aa11.39□□□□□ -0.59
BDNF-216ENST00000532997 UQCRHLA0A096LP55 91 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 SYCE3A1L190 88 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 TPM3P06753 285 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 UQCRHP07919 91 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 SDSP20132 328 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 GAS2L3Q86XJ1 694 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 PTCH1Q13635 1447 aa11.38□□□□□ -0.59
BDNF-216ENST00000532997 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms