RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
SSH3-210ENST00000532881 TWISTNBQ3B726 338 aaPredicted RBP18.78■□□□□ 0.6
SSH3-210ENST00000532881 ALDH1L2Q3SY69 923 aa18.78■□□□□ 0.6
SSH3-210ENST00000532881 CHD1LQ86WJ1 897 aa18.78■□□□□ 0.6
SSH3-210ENST00000532881 COG3Q96JB2 828 aa18.78■□□□□ 0.6
SSH3-210ENST00000532881 GZF1Q9H116 711 aaPredicted RBP18.77■□□□□ 0.59
SSH3-210ENST00000532881 MCM10Q7L590 875 aa18.75■□□□□ 0.59
SSH3-210ENST00000532881 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
SSH3-210ENST00000532881 MIS18AQ9NYP9 233 aa18.75■□□□□ 0.59
SSH3-210ENST00000532881 CCDC61Q9Y6R9 512 aa18.75■□□□□ 0.59
SSH3-210ENST00000532881 CPSF1Q10570 1443 aaKnown RBP18.74■□□□□ 0.59
SSH3-210ENST00000532881 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
SSH3-210ENST00000532881 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
SSH3-210ENST00000532881 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
SSH3-210ENST00000532881 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
SSH3-210ENST00000532881 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
SSH3-210ENST00000532881 GNAI1P63096 354 aa18.73■□□□□ 0.59
SSH3-210ENST00000532881 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
SSH3-210ENST00000532881 ATP7BP35670 1465 aa18.73■□□□□ 0.59
SSH3-210ENST00000532881 APBB1O00213 710 aa18.72■□□□□ 0.59
SSH3-210ENST00000532881 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
SSH3-210ENST00000532881 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
SSH3-210ENST00000532881 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
SSH3-210ENST00000532881 ZMYM3Q14202 1370 aa18.71■□□□□ 0.59
SSH3-210ENST00000532881 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
SSH3-210ENST00000532881 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
SSH3-210ENST00000532881 CEBPAP49715 358 aaPredicted RBP18.71■□□□□ 0.59
SSH3-210ENST00000532881 SLC26A8Q96RN1 970 aa18.71■□□□□ 0.59
SSH3-210ENST00000532881 DIP2BQ9P265 1576 aa18.71■□□□□ 0.59
SSH3-210ENST00000532881 EIF4A2Q14240 407 aaKnown RBP18.71■□□□□ 0.59
SSH3-210ENST00000532881 C16orf71Q8IYS4 520 aaPredicted RBP18.71■□□□□ 0.59
SSH3-210ENST00000532881 CFAP44Q96MT7 982 aa18.71■□□□□ 0.59
SSH3-210ENST00000532881 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
SSH3-210ENST00000532881 NRXN3Q9Y4C0 1643 aa18.7■□□□□ 0.58
SSH3-210ENST00000532881 CD2BP2O95400 341 aaKnown RBP18.7■□□□□ 0.58
SSH3-210ENST00000532881 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
SSH3-210ENST00000532881 FOXO3O43524 673 aa18.69■□□□□ 0.58
SSH3-210ENST00000532881 CDC42BPGQ6DT37 1551 aa18.68■□□□□ 0.58
SSH3-210ENST00000532881 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
SSH3-210ENST00000532881 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
SSH3-210ENST00000532881 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
SSH3-210ENST00000532881 ACEP12821 1306 aa18.67■□□□□ 0.58
SSH3-210ENST00000532881 LTKP29376 864 aa18.67■□□□□ 0.58
SSH3-210ENST00000532881 OTUD7AQ8TE49 926 aaPredicted RBP18.67■□□□□ 0.58
SSH3-210ENST00000532881 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
SSH3-210ENST00000532881 ABCC4O15439 1325 aa18.66■□□□□ 0.58
SSH3-210ENST00000532881 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
SSH3-210ENST00000532881 HSCBQ8IWL3 235 aa18.65■□□□□ 0.58
SSH3-210ENST00000532881 KIF2CQ99661 725 aa18.65■□□□□ 0.58
SSH3-210ENST00000532881 MCM4P33991 863 aa18.65■□□□□ 0.58
SSH3-210ENST00000532881 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
SSH3-210ENST00000532881 SMARCA5O60264 1052 aaPredicted RBP18.64■□□□□ 0.57
SSH3-210ENST00000532881 CDK12Q9NYV4 1490 aaPredicted RBP18.64■□□□□ 0.57
SSH3-210ENST00000532881 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
SSH3-210ENST00000532881 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
SSH3-210ENST00000532881 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
SSH3-210ENST00000532881 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
SSH3-210ENST00000532881 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
SSH3-210ENST00000532881 BMP2KLQ5H9B9 411 aa18.63■□□□□ 0.57
SSH3-210ENST00000532881 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
SSH3-210ENST00000532881 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
SSH3-210ENST00000532881 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
SSH3-210ENST00000532881 NUTM2GQ5VZR2 741 aa18.62■□□□□ 0.57
SSH3-210ENST00000532881 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
SSH3-210ENST00000532881 RBM25P49756 843 aaKnown RBP18.61■□□□□ 0.57
SSH3-210ENST00000532881 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
SSH3-210ENST00000532881 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
SSH3-210ENST00000532881 F6X3S4 739 aa18.61■□□□□ 0.57
SSH3-210ENST00000532881 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
SSH3-210ENST00000532881 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
SSH3-210ENST00000532881 AGLP35573 1532 aa18.6■□□□□ 0.57
SSH3-210ENST00000532881 PIK3R4Q99570 1358 aa18.6■□□□□ 0.57
SSH3-210ENST00000532881 MEIS3Q99687 375 aa18.6■□□□□ 0.57
SSH3-210ENST00000532881 PANK2Q9BZ23 570 aa18.6■□□□□ 0.57
SSH3-210ENST00000532881 G2E3Q7L622 706 aa18.59■□□□□ 0.57
SSH3-210ENST00000532881 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
SSH3-210ENST00000532881 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
SSH3-210ENST00000532881 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
SSH3-210ENST00000532881 SLC4A10Q6U841 1118 aa18.59■□□□□ 0.57
SSH3-210ENST00000532881 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
SSH3-210ENST00000532881 API5Q9BZZ5 524 aaKnown RBP18.58■□□□□ 0.57
SSH3-210ENST00000532881 TNRQ92752 1358 aa18.58■□□□□ 0.57
SSH3-210ENST00000532881 SLC4A2P04920 1241 aa18.58■□□□□ 0.56
SSH3-210ENST00000532881 TRAK2O60296 914 aa18.57■□□□□ 0.56
SSH3-210ENST00000532881 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
SSH3-210ENST00000532881 MAP3K19Q56UN5 1328 aa18.57■□□□□ 0.56
SSH3-210ENST00000532881 TMEM2Q9UHN6 1383 aa18.57■□□□□ 0.56
SSH3-210ENST00000532881 CHL1O00533 1208 aa18.56■□□□□ 0.56
SSH3-210ENST00000532881 MSH6P52701 1360 aa18.56■□□□□ 0.56
SSH3-210ENST00000532881 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.56■□□□□ 0.56
SSH3-210ENST00000532881 MON2Q7Z3U7 1717 aa18.56■□□□□ 0.56
SSH3-210ENST00000532881 C3P01024 1663 aa18.55■□□□□ 0.56
SSH3-210ENST00000532881 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
SSH3-210ENST00000532881 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
SSH3-210ENST00000532881 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
SSH3-210ENST00000532881 XRCC6P12956 609 aaKnown RBP eCLIP18.55■□□□□ 0.56
SSH3-210ENST00000532881 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
SSH3-210ENST00000532881 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
SSH3-210ENST00000532881 DCTPP1Q9H773 170 aa18.54■□□□□ 0.56
SSH3-210ENST00000532881 RGS12O14924 1447 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms