RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	CCDC61	Q9Y6R9	512 aa		13.88	□□□□□ -0.19
PPFIA1-223	ENST00000532793	RGPD1	P0DJD0	1748 aa		13.87	□□□□□ -0.19
PPFIA1-223	ENST00000532793	ONECUT3	O60422	494 aa	Predicted RBP	13.87	□□□□□ -0.19
PPFIA1-223	ENST00000532793	SRPK2	P78362	688 aa	Known RBP	13.87	□□□□□ -0.19
PPFIA1-223	ENST00000532793	ACE	P12821	1306 aa		13.86	□□□□□ -0.19
PPFIA1-223	ENST00000532793	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.86	□□□□□ -0.19
PPFIA1-223	ENST00000532793	BAG6	P46379	1132 aa		13.85	□□□□□ -0.19
PPFIA1-223	ENST00000532793	NUTM2G	Q5VZR2	741 aa		13.85	□□□□□ -0.19
PPFIA1-223	ENST00000532793	POLR3A	O14802	1390 aa	Predicted RBP	13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	KIAA0232	Q92628	1395 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	EVA1C	P58658	441 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	DEFB132	Q7Z7B7	95 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	ABTB2	Q8N961	1025 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	STRN4	Q9NRL3	753 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	SPATA31A5	Q5VU36	1347 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	SPATA31A7	Q8IWB4	1347 aa		13.84	□□□□□ -0.19
PPFIA1-223	ENST00000532793	PPIP5K1	Q6PFW1	1433 aa		13.83	□□□□□ -0.2
PPFIA1-223	ENST00000532793	THSD7A	Q9UPZ6	1657 aa		13.83	□□□□□ -0.2
PPFIA1-223	ENST00000532793	ZC3H6	P61129	1189 aa	Known RBP	13.83	□□□□□ -0.2
PPFIA1-223	ENST00000532793	NBPF1	Q3BBV0	1214 aa		13.83	□□□□□ -0.2
PPFIA1-223	ENST00000532793	NBPF8	Q3BBV2	869 aa		13.83	□□□□□ -0.2
PPFIA1-223	ENST00000532793	NRK	Q7Z2Y5	1582 aa		13.83	□□□□□ -0.2
PPFIA1-223	ENST00000532793	PLEKHG3	A1L390	1219 aa		13.82	□□□□□ -0.2
PPFIA1-223	ENST00000532793	CHRNA2	Q15822	529 aa		13.82	□□□□□ -0.2
PPFIA1-223	ENST00000532793	TRPM1	Q7Z4N2	1603 aa		13.82	□□□□□ -0.2
PPFIA1-223	ENST00000532793	NLRP13	Q86W25	1043 aa		13.81	□□□□□ -0.2
PPFIA1-223	ENST00000532793	CABP2	Q9NPB3	220 aa		13.8	□□□□□ -0.2
PPFIA1-223	ENST00000532793	USP35	Q9P2H5	1018 aa		13.8	□□□□□ -0.2
PPFIA1-223	ENST00000532793	SPATA31A1	Q5TZJ5	1347 aa		13.79	□□□□□ -0.2
PPFIA1-223	ENST00000532793	BRD4	O60885	1362 aa	Predicted RBP	13.79	□□□□□ -0.2
PPFIA1-223	ENST00000532793	TNS1	Q9HBL0	1735 aa	Known RBP	13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	ZBTB7C	A1YPR0	619 aa		13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	NEUROD1	Q13562	356 aa		13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	L3MBTL2	Q969R5	705 aa		13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	EVC2	Q86UK5	1308 aa		13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	ROCK2	O75116	1388 aa	Known RBP	13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	SSH2	Q76I76	1423 aa		13.78	□□□□□ -0.2
PPFIA1-223	ENST00000532793	PDE3B	Q13370	1112 aa		13.77	□□□□□ -0.21
PPFIA1-223	ENST00000532793	FAM182B	Q5T319	152 aa		13.77	□□□□□ -0.21
PPFIA1-223	ENST00000532793	LMO7	Q8WWI1	1683 aa		13.76	□□□□□ -0.21
PPFIA1-223	ENST00000532793	CPD	O75976	1380 aa		13.76	□□□□□ -0.21
PPFIA1-223	ENST00000532793	FAM196A	Q6ZSG2	479 aa		13.76	□□□□□ -0.21
PPFIA1-223	ENST00000532793	TRPC6	Q9Y210	931 aa		13.76	□□□□□ -0.21
PPFIA1-223	ENST00000532793	LRP5	O75197	1615 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	USP6	P35125	1406 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	USP19	O94966	1318 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	NLRP6	P59044	892 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	CABP1	Q9NZU7	370 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	AKAP12	Q02952	1782 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	CAMTA1	Q9Y6Y1	1673 aa		13.75	□□□□□ -0.21
PPFIA1-223	ENST00000532793	EP400	Q96L91	3159 aa		13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	GC	P02774	474 aa		13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	EN1	Q05925	392 aa	Predicted RBP	13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	BARGIN	Q6ZT62	677 aa		13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	TCP11L2	Q8N4U5	519 aa		13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	SIN3A	Q96ST3	1273 aa		13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.74	□□□□□ -0.21
PPFIA1-223	ENST00000532793	PSD	A5PKW4	1024 aa	Predicted RBP	13.73	□□□□□ -0.21
PPFIA1-223	ENST00000532793	MMRN1	Q13201	1228 aa		13.73	□□□□□ -0.21
PPFIA1-223	ENST00000532793	LARP1	Q6PKG0	1096 aa	Known RBP	13.73	□□□□□ -0.21
PPFIA1-223	ENST00000532793	THRAP3	Q9Y2W1	955 aa	Known RBP	13.73	□□□□□ -0.21
PPFIA1-223	ENST00000532793	PARP4	Q9UKK3	1724 aa	Known RBP	13.73	□□□□□ -0.21
PPFIA1-223	ENST00000532793	PIK3C2A	O00443	1686 aa		13.72	□□□□□ -0.21
PPFIA1-223	ENST00000532793	TRIM37	O94972	964 aa		13.72	□□□□□ -0.21
PPFIA1-223	ENST00000532793	COLQ	Q9Y215	455 aa	Predicted RBP	13.72	□□□□□ -0.21
PPFIA1-223	ENST00000532793	COL5A2	P05997	1499 aa	Predicted RBP	13.72	□□□□□ -0.21
PPFIA1-223	ENST00000532793	DISP2	A7MBM2	1401 aa		13.72	□□□□□ -0.21
PPFIA1-223	ENST00000532793	CRB1	P82279	1406 aa		13.72	□□□□□ -0.21
PPFIA1-223	ENST00000532793	SLIT3	O75094	1523 aa		13.71	□□□□□ -0.21
PPFIA1-223	ENST00000532793	WNK3	Q9BYP7	1800 aa		13.71	□□□□□ -0.22
PPFIA1-223	ENST00000532793	C11orf95	C9JLR9	678 aa	Predicted RBP	13.7	□□□□□ -0.22
PPFIA1-223	ENST00000532793	APBA3	O96018	575 aa		13.7	□□□□□ -0.22
PPFIA1-223	ENST00000532793	RGPD5	Q99666	1765 aa		13.7	□□□□□ -0.22
PPFIA1-223	ENST00000532793	PARD3	Q8TEW0	1356 aa		13.7	□□□□□ -0.22
PPFIA1-223	ENST00000532793	EZH2	Q15910	746 aa	Known RBP	13.69	□□□□□ -0.22
PPFIA1-223	ENST00000532793	TOM1L2	Q6ZVM7	507 aa		13.69	□□□□□ -0.22
PPFIA1-223	ENST00000532793	KCNH5	Q8NCM2	988 aa		13.69	□□□□□ -0.22
PPFIA1-223	ENST00000532793	AATK	Q6ZMQ8	1374 aa		13.69	□□□□□ -0.22
PPFIA1-223	ENST00000532793	MON2	Q7Z3U7	1717 aa		13.68	□□□□□ -0.22
PPFIA1-223	ENST00000532793	ST18	O60284	1047 aa		13.68	□□□□□ -0.22
PPFIA1-223	ENST00000532793	RREB1	Q92766	1687 aa		13.68	□□□□□ -0.22
PPFIA1-223	ENST00000532793	TONSL	Q96HA7	1378 aa		13.68	□□□□□ -0.22
PPFIA1-223	ENST00000532793	LRRC37A3	O60309	1634 aa		13.68	□□□□□ -0.22
PPFIA1-223	ENST00000532793	TTC21A	Q8NDW8	1320 aa		13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	SOX12	O15370	315 aa		13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	CSB-PGBD3	P0DP91	1061 aa		13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	R3HDM1	Q15032	1099 aa	Known RBP	13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	SPNS2	Q8IVW8	549 aa		13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	CARD11	Q9BXL7	1154 aa		13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	KTN1	Q86UP2	1357 aa	Known RBP	13.67	□□□□□ -0.22
PPFIA1-223	ENST00000532793	TTC21B	Q7Z4L5	1316 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	OVOS2	A0A0G2JMS6	1433 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	OVOS2	A0A0J9YW53	1432 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	CPSF1	Q10570	1443 aa	Known RBP	13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	OVOS2	Q6IE36	1432 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	DDB1	Q16531	1140 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	NBPF14	Q5TI25	921 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	KIF12	Q96FN5	646 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	NUP188	Q5SRE5	1749 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	SBF2	Q86WG5	1849 aa		13.66	□□□□□ -0.22

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