RNA–Protein interactions for RNA: ENST00000532377.1

LMO7-221, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-221ENST00000532377 POM121CA8CG34 1229 aa5.5□□□□□ -1.53
LMO7-221ENST00000532377 NNTQ13423 1086 aa5.5□□□□□ -1.53
LMO7-221ENST00000532377 WASHC4Q2M389 1173 aa5.5□□□□□ -1.53
LMO7-221ENST00000532377 INTS6LQ5JSJ4 861 aaKnown RBP5.5□□□□□ -1.53
LMO7-221ENST00000532377 VASH1Q7L8A9 365 aaPredicted RBP5.5□□□□□ -1.53
LMO7-221ENST00000532377 PHTF2Q8N3S3 785 aa5.5□□□□□ -1.53
LMO7-221ENST00000532377 SLC10A4Q96EP9 437 aa5.5□□□□□ -1.53
LMO7-221ENST00000532377 KCTD15Q96SI1 283 aaPredicted RBP5.5□□□□□ -1.53
LMO7-221ENST00000532377 ALG2Q9H553 416 aa5.5□□□□□ -1.53
LMO7-221ENST00000532377 CDV3Q9UKY7 258 aaKnown RBP5.5□□□□□ -1.53
LMO7-221ENST00000532377 GIGYF1O75420 1035 aaPredicted RBP5.49□□□□□ -1.53
LMO7-221ENST00000532377 TIMP2P16035 220 aa5.49□□□□□ -1.53
LMO7-221ENST00000532377 FSHRP23945 695 aa5.49□□□□□ -1.53
LMO7-221ENST00000532377 ARID5BQ14865 1188 aa5.49□□□□□ -1.53
LMO7-221ENST00000532377 PROSER2Q86WR7 435 aaPredicted RBP5.49□□□□□ -1.53
LMO7-221ENST00000532377 AAASQ9NRG9 546 aa5.49□□□□□ -1.53
LMO7-221ENST00000532377 CHIC2Q9UKJ5 165 aa5.49□□□□□ -1.53
LMO7-221ENST00000532377 RAD21O60216 631 aa5.48□□□□□ -1.53
LMO7-221ENST00000532377 MCCD1P59942 119 aaPredicted RBP5.48□□□□□ -1.53
LMO7-221ENST00000532377 PKDCCQ504Y2 493 aa5.48□□□□□ -1.53
LMO7-221ENST00000532377 DZIP3Q86Y13 1208 aaKnown RBP5.48□□□□□ -1.53
LMO7-221ENST00000532377 CEP126Q9P2H0 1117 aa5.48□□□□□ -1.53
LMO7-221ENST00000532377 PCDHB9Q9Y5E1 797 aa5.48□□□□□ -1.53
LMO7-221ENST00000532377 CTC1Q2NKJ3 1217 aa5.47□□□□□ -1.53
LMO7-221ENST00000532377 NBPF20Q3BBV1 942 aa5.47□□□□□ -1.53
LMO7-221ENST00000532377 SEPT12Q8IYM1 358 aa5.47□□□□□ -1.53
LMO7-221ENST00000532377 ITPKCQ96DU7 683 aa5.47□□□□□ -1.53
LMO7-221ENST00000532377 DACH1Q9UI36 760 aa5.47□□□□□ -1.53
LMO7-221ENST00000532377 WASF2Q9Y6W5 498 aa5.47□□□□□ -1.53
LMO7-221ENST00000532377 ERVH48-1M5A8F1 160 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 ST8SIA5O15466 376 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 TRAK2O60296 914 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 LILRA1O75019 489 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 SOX11P35716 441 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 EIF4G2P78344 907 aaKnown RBP eCLIP5.46□□□□□ -1.54
LMO7-221ENST00000532377 TSGA10IPQ3SY00 556 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 PPP1R26Q5T8A7 1209 aaPredicted RBP5.46□□□□□ -1.54
LMO7-221ENST00000532377 Q6ZNB5 142 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 CCDC116Q8IYX3 515 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 ZMYND15Q9H091 742 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 ZFAND3Q9H8U3 227 aa5.46□□□□□ -1.54
LMO7-221ENST00000532377 WDR4P57081 412 aaKnown RBP5.45□□□□□ -1.54
LMO7-221ENST00000532377 TRAF7Q6Q0C0 670 aa5.45□□□□□ -1.54
LMO7-221ENST00000532377 KDF1Q8NAX2 398 aaPredicted RBP5.45□□□□□ -1.54
LMO7-221ENST00000532377 CCDC85AQ96PX6 553 aaPredicted RBP5.45□□□□□ -1.54
LMO7-221ENST00000532377 UCN2Q96RP3 112 aa5.45□□□□□ -1.54
LMO7-221ENST00000532377 TMPRSS4Q9NRS4 437 aa5.45□□□□□ -1.54
LMO7-221ENST00000532377 ZNF330Q9Y3S2 320 aaPredicted RBP5.45□□□□□ -1.54
LMO7-221ENST00000532377 SUPT5HO00267 1087 aaKnown RBP5.44□□□□□ -1.54
LMO7-221ENST00000532377 PIK3CDO00329 1044 aa5.44□□□□□ -1.54
LMO7-221ENST00000532377 ZIC2O95409 532 aaPredicted RBP5.44□□□□□ -1.54
LMO7-221ENST00000532377 ADD1P35611 737 aaKnown RBP5.44□□□□□ -1.54
LMO7-221ENST00000532377 Q6ZVU0 165 aa5.44□□□□□ -1.54
LMO7-221ENST00000532377 ZNF784Q8NCA9 323 aaPredicted RBP5.44□□□□□ -1.54
LMO7-221ENST00000532377 EMILIN1Q9Y6C2 1016 aa5.44□□□□□ -1.54
LMO7-221ENST00000532377 ABCC9O60706 1549 aa5.43□□□□□ -1.54
LMO7-221ENST00000532377 CAPN5O15484 640 aaPredicted RBP5.43□□□□□ -1.54
LMO7-221ENST00000532377 DHX9Q08211 1270 aaKnown RBP5.43□□□□□ -1.54
LMO7-221ENST00000532377 HDGFL1Q5TGJ6 251 aa5.43□□□□□ -1.54
LMO7-221ENST00000532377 TRIM46Q7Z4K8 759 aa5.43□□□□□ -1.54
LMO7-221ENST00000532377 MEIOBQ8N635 442 aa5.43□□□□□ -1.54
LMO7-221ENST00000532377 ZNF592Q92610 1267 aa5.43□□□□□ -1.54
LMO7-221ENST00000532377 CDCA7Q9BWT1 371 aaPredicted RBP5.43□□□□□ -1.54
LMO7-221ENST00000532377 AXIN1O15169 862 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 SCTRP47872 440 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 ERVK-9P63128 1117 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 CBLBQ13191 982 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 RNF20Q5VTR2 975 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 CCDC125Q86Z20 511 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 GLMNQ92990 594 aa5.42□□□□□ -1.54
LMO7-221ENST00000532377 POTECB2RU33 542 aa5.41□□□□□ -1.54
LMO7-221ENST00000532377 SEMA3FQ13275 785 aa5.41□□□□□ -1.54
LMO7-221ENST00000532377 WWC1Q8IX03 1113 aa5.41□□□□□ -1.54
LMO7-221ENST00000532377 NFATC2IPQ8NCF5 419 aa5.41□□□□□ -1.54
LMO7-221ENST00000532377 ATP13A2Q9NQ11 1180 aa5.41□□□□□ -1.54
LMO7-221ENST00000532377 BMP1P13497 986 aa5.4□□□□□ -1.54
LMO7-221ENST00000532377 RAB15P59190 212 aa5.4□□□□□ -1.54
LMO7-221ENST00000532377 OSBPL3Q9H4L5 887 aa5.4□□□□□ -1.54
LMO7-221ENST00000532377 PGPEP1Q9NXJ5 209 aa5.4□□□□□ -1.54
LMO7-221ENST00000532377 MRPL14Q6P1L8 145 aaKnown RBP5.39□□□□□ -1.55
LMO7-221ENST00000532377 TBC1D9Q6ZT07 1266 aa5.39□□□□□ -1.55
LMO7-221ENST00000532377 RNF135Q8IUD6 432 aa5.39□□□□□ -1.55
LMO7-221ENST00000532377 PLPP7Q8NBV4 271 aa5.39□□□□□ -1.55
LMO7-221ENST00000532377 C1orf115Q9H7X2 142 aa5.39□□□□□ -1.55
LMO7-221ENST00000532377 CYLDQ9NQC7 956 aa5.39□□□□□ -1.55
LMO7-221ENST00000532377 ZNF777Q9ULD5 760 aaPredicted RBP5.39□□□□□ -1.55
LMO7-221ENST00000532377 PCDHB11Q9Y5F2 797 aa5.39□□□□□ -1.55
LMO7-221ENST00000532377 ADH1AP07327 375 aa5.38□□□□□ -1.55
LMO7-221ENST00000532377 MAP7D1Q3KQU3 841 aa5.38□□□□□ -1.55
LMO7-221ENST00000532377 SLFNL1Q499Z3 407 aa5.38□□□□□ -1.55
LMO7-221ENST00000532377 CC2D2BQ6DHV5 1058 aa5.38□□□□□ -1.55
LMO7-221ENST00000532377 LINC00528Q8N1L1 170 aa5.38□□□□□ -1.55
LMO7-221ENST00000532377 GMPR2Q9P2T1 348 aaKnown RBP5.38□□□□□ -1.55
LMO7-221ENST00000532377 SPINT1O43278 529 aa5.37□□□□□ -1.55
LMO7-221ENST00000532377 PLEKHM2Q8IWE5 1019 aa5.37□□□□□ -1.55
LMO7-221ENST00000532377 AGBL1Q96MI9 1066 aa5.37□□□□□ -1.55
LMO7-221ENST00000532377 ZFP42Q96MM3 310 aa5.37□□□□□ -1.55
LMO7-221ENST00000532377 DOLKQ9UPQ8 538 aa5.37□□□□□ -1.55
LMO7-221ENST00000532377 ZCCHC6Q5VYS8 1495 aaKnown RBP5.37□□□□□ -1.55
LMO7-221ENST00000532377 PALM3A6NDB9 673 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms