RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FBXO41Q8TF61 875 aa17.11■□□□□ 0.33
COPB1-208ENST00000532088 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
COPB1-208ENST00000532088 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
COPB1-208ENST00000532088 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
COPB1-208ENST00000532088 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
COPB1-208ENST00000532088 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
COPB1-208ENST00000532088 EVX2Q03828 476 aa17.09■□□□□ 0.33
COPB1-208ENST00000532088 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
COPB1-208ENST00000532088 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.32
COPB1-208ENST00000532088 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.32
COPB1-208ENST00000532088 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.32
COPB1-208ENST00000532088 FYB1O15117 783 aa17.08■□□□□ 0.32
COPB1-208ENST00000532088 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
COPB1-208ENST00000532088 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
COPB1-208ENST00000532088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
COPB1-208ENST00000532088 PHF12Q96QT6 1004 aa17.07■□□□□ 0.32
COPB1-208ENST00000532088 SGIP1Q9BQI5 828 aa17.07■□□□□ 0.32
COPB1-208ENST00000532088 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
COPB1-208ENST00000532088 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
COPB1-208ENST00000532088 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
COPB1-208ENST00000532088 USP19O94966 1318 aa17.05■□□□□ 0.32
COPB1-208ENST00000532088 MAP3K13O43283 966 aa17.05■□□□□ 0.32
COPB1-208ENST00000532088 NME9Q86XW9 330 aa17.05■□□□□ 0.32
COPB1-208ENST00000532088 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
COPB1-208ENST00000532088 COG3Q96JB2 828 aa17.04■□□□□ 0.32
COPB1-208ENST00000532088 SLIT3O75094 1523 aa17.04■□□□□ 0.32
COPB1-208ENST00000532088 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
COPB1-208ENST00000532088 JCADQ9P266 1359 aa17.03■□□□□ 0.32
COPB1-208ENST00000532088 NLRP6P59044 892 aa17.03■□□□□ 0.32
COPB1-208ENST00000532088 ZNF467Q7Z7K2 595 aaPredicted RBP17.03■□□□□ 0.32
COPB1-208ENST00000532088 MARF1Q9Y4F3 1742 aaKnown RBP17.03■□□□□ 0.32
COPB1-208ENST00000532088 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
COPB1-208ENST00000532088 HSPA1LP34931 641 aa17.02■□□□□ 0.32
COPB1-208ENST00000532088 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
COPB1-208ENST00000532088 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
COPB1-208ENST00000532088 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
COPB1-208ENST00000532088 AATKQ6ZMQ8 1374 aa17.01■□□□□ 0.31
COPB1-208ENST00000532088 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
COPB1-208ENST00000532088 RALBP1Q15311 655 aa17■□□□□ 0.31
COPB1-208ENST00000532088 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
COPB1-208ENST00000532088 PHRF1Q9P1Y6 1649 aaKnown RBP16.99■□□□□ 0.31
COPB1-208ENST00000532088 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
COPB1-208ENST00000532088 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
COPB1-208ENST00000532088 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
COPB1-208ENST00000532088 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
COPB1-208ENST00000532088 NFAT5O94916 1531 aa16.98■□□□□ 0.31
COPB1-208ENST00000532088 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
COPB1-208ENST00000532088 PCDHB8Q9UN66 801 aa16.98■□□□□ 0.31
COPB1-208ENST00000532088 GCP02774 474 aa16.97■□□□□ 0.31
COPB1-208ENST00000532088 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
COPB1-208ENST00000532088 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
COPB1-208ENST00000532088 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
COPB1-208ENST00000532088 PRKRIP1Q9H875 184 aaPredicted RBP16.96■□□□□ 0.31
COPB1-208ENST00000532088 CPDO75976 1380 aa16.96■□□□□ 0.31
COPB1-208ENST00000532088 ABCC6O95255 1503 aa16.96■□□□□ 0.3
COPB1-208ENST00000532088 ANP32CO43423 234 aa16.95■□□□□ 0.3
COPB1-208ENST00000532088 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
COPB1-208ENST00000532088 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
COPB1-208ENST00000532088 CLCN6P51797 869 aa16.94■□□□□ 0.3
COPB1-208ENST00000532088 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
COPB1-208ENST00000532088 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
COPB1-208ENST00000532088 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
COPB1-208ENST00000532088 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
COPB1-208ENST00000532088 CABLES1Q8TDN4 633 aa16.9■□□□□ 0.3
COPB1-208ENST00000532088 MS4A3Q96HJ5 214 aa16.9■□□□□ 0.3
COPB1-208ENST00000532088 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
COPB1-208ENST00000532088 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
COPB1-208ENST00000532088 POLKQ9UBT6 870 aa16.89■□□□□ 0.29
COPB1-208ENST00000532088 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
COPB1-208ENST00000532088 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
COPB1-208ENST00000532088 INSRP06213 1382 aa16.89■□□□□ 0.29
COPB1-208ENST00000532088 CDK12Q9NYV4 1490 aaPredicted RBP16.88■□□□□ 0.29
COPB1-208ENST00000532088 HS6ST3Q8IZP7 471 aa16.88■□□□□ 0.29
COPB1-208ENST00000532088 FLT4P35916 1363 aa16.88■□□□□ 0.29
COPB1-208ENST00000532088 KIAA0232Q92628 1395 aa16.88■□□□□ 0.29
COPB1-208ENST00000532088 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
COPB1-208ENST00000532088 LTN1O94822 1766 aa16.87■□□□□ 0.29
COPB1-208ENST00000532088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.87■□□□□ 0.29
COPB1-208ENST00000532088 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
COPB1-208ENST00000532088 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
COPB1-208ENST00000532088 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
COPB1-208ENST00000532088 TNNT2P45379 298 aaPredicted RBP16.86■□□□□ 0.29
COPB1-208ENST00000532088 IP6K1Q92551 441 aa16.86■□□□□ 0.29
COPB1-208ENST00000532088 COL18A1P39060 1754 aa16.86■□□□□ 0.29
COPB1-208ENST00000532088 LRP6O75581 1613 aa16.85■□□□□ 0.29
COPB1-208ENST00000532088 SOX12O15370 315 aa16.85■□□□□ 0.29
COPB1-208ENST00000532088 ZC3H6P61129 1189 aaKnown RBP16.85■□□□□ 0.29
COPB1-208ENST00000532088 RRS1Q15050 365 aaKnown RBP16.85■□□□□ 0.29
COPB1-208ENST00000532088 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
COPB1-208ENST00000532088 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
COPB1-208ENST00000532088 HOXC9P31274 260 aa16.84■□□□□ 0.29
COPB1-208ENST00000532088 AMPHP49418 695 aa16.84■□□□□ 0.29
COPB1-208ENST00000532088 MTHFSP49914 203 aa16.84■□□□□ 0.29
COPB1-208ENST00000532088 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
COPB1-208ENST00000532088 EMILIN1Q9Y6C2 1016 aa16.84■□□□□ 0.29
COPB1-208ENST00000532088 FBLN1P23142 703 aa16.83■□□□□ 0.28
COPB1-208ENST00000532088 PSEN1P49768 467 aa16.83■□□□□ 0.28
COPB1-208ENST00000532088 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
COPB1-208ENST00000532088 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
COPB1-208ENST00000532088 SLIT2O94813 1529 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms