RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 NKTRP30414 1462 aaKnown RBP10.72□□□□□ -0.69
TRIM53CP-201ENST00000531490 PPP1R15AO75807 674 aaPredicted RBP10.72□□□□□ -0.69
TRIM53CP-201ENST00000531490 RXRBP28702 533 aa10.72□□□□□ -0.69
TRIM53CP-201ENST00000531490 NOS1P29475 1434 aa10.72□□□□□ -0.69
TRIM53CP-201ENST00000531490 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
TRIM53CP-201ENST00000531490 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
TRIM53CP-201ENST00000531490 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
TRIM53CP-201ENST00000531490 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
TRIM53CP-201ENST00000531490 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
TRIM53CP-201ENST00000531490 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
TRIM53CP-201ENST00000531490 SLC52A1Q9NWF4 448 aa10.7□□□□□ -0.7
TRIM53CP-201ENST00000531490 NWD1Q149M9 1564 aa10.7□□□□□ -0.7
TRIM53CP-201ENST00000531490 COL16A1Q07092 1604 aaPredicted RBP10.7□□□□□ -0.7
TRIM53CP-201ENST00000531490 ZFYVE9O95405 1425 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 DAPK1P53355 1430 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 PHLPP1O60346 1717 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 BRINP3Q76B58 766 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 ADGRB3O60242 1522 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 PLEKHG1Q9ULL1 1385 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 RIMS2Q9UQ26 1411 aa10.69□□□□□ -0.7
TRIM53CP-201ENST00000531490 ATF3P18847 181 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 PRSS12P56730 875 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 MRPL50Q8N5N7 158 aaKnown RBP10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 CDCA7LQ96GN5 454 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 C19orf44Q9H6X5 657 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 AFF2P51816 1311 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 LMTK2Q8IWU2 1503 aa10.68□□□□□ -0.7
TRIM53CP-201ENST00000531490 DDX17Q92841 729 aaKnown RBP10.67□□□□□ -0.7
TRIM53CP-201ENST00000531490 FAM198AQ9UFP1 575 aa10.67□□□□□ -0.7
TRIM53CP-201ENST00000531490 ANKRD30AQ9BXX3 1397 aa10.67□□□□□ -0.7
TRIM53CP-201ENST00000531490 ITGAEP38570 1179 aa10.66□□□□□ -0.7
TRIM53CP-201ENST00000531490 ADAMTS13Q76LX8 1427 aa10.66□□□□□ -0.7
TRIM53CP-201ENST00000531490 CROCC2H7BZ55 1655 aa10.66□□□□□ -0.7
TRIM53CP-201ENST00000531490 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.7
TRIM53CP-201ENST00000531490 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
TRIM53CP-201ENST00000531490 AMOTL2Q9Y2J4 779 aa10.65□□□□□ -0.7
TRIM53CP-201ENST00000531490 RBM26Q5T8P6 1007 aaKnown RBP10.65□□□□□ -0.71
TRIM53CP-201ENST00000531490 PACS2Q86VP3 889 aa10.65□□□□□ -0.71
TRIM53CP-201ENST00000531490 KCTD12Q96CX2 325 aaKnown RBP10.65□□□□□ -0.71
TRIM53CP-201ENST00000531490 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.71
TRIM53CP-201ENST00000531490 RGS12O14924 1447 aa10.64□□□□□ -0.71
TRIM53CP-201ENST00000531490 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
TRIM53CP-201ENST00000531490 NUTM2FA1L443 756 aa10.64□□□□□ -0.71
TRIM53CP-201ENST00000531490 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
TRIM53CP-201ENST00000531490 PTGDRQ13258 359 aa10.64□□□□□ -0.71
TRIM53CP-201ENST00000531490 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
TRIM53CP-201ENST00000531490 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
TRIM53CP-201ENST00000531490 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
TRIM53CP-201ENST00000531490 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
TRIM53CP-201ENST00000531490 ADAMTS2O95450 1211 aa10.63□□□□□ -0.71
TRIM53CP-201ENST00000531490 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
TRIM53CP-201ENST00000531490 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
TRIM53CP-201ENST00000531490 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
TRIM53CP-201ENST00000531490 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
TRIM53CP-201ENST00000531490 LAPTM4BQ86VI4 370 aa10.62□□□□□ -0.71
TRIM53CP-201ENST00000531490 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
TRIM53CP-201ENST00000531490 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRIM53CP-201ENST00000531490 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
TRIM53CP-201ENST00000531490 DIP2AQ14689 1571 aa10.61□□□□□ -0.71
TRIM53CP-201ENST00000531490 CDK12Q9NYV4 1490 aaPredicted RBP10.6□□□□□ -0.71
TRIM53CP-201ENST00000531490 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
TRIM53CP-201ENST00000531490 WNT2BQ93097 391 aa10.6□□□□□ -0.71
TRIM53CP-201ENST00000531490 SMAPO00193 183 aa10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 FAM98CQ17RN3 349 aaKnown RBP10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 LRRC59Q96AG4 307 aaKnown RBP10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 ZFRQ96KR1 1074 aaKnown RBP10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 ADGRL2O95490 1459 aa10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 TMEM131LA2VDJ0 1609 aa10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
TRIM53CP-201ENST00000531490 ASXL1Q8IXJ9 1541 aa10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 RPRD2Q5VT52 1461 aaKnown RBP10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 FCHSD2O94868 740 aa10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 TATDN2Q93075 761 aa10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 MST1RQ04912 1400 aa10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 PNPLA6Q8IY17 1366 aa10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 PIK3R4Q99570 1358 aa10.58□□□□□ -0.72
TRIM53CP-201ENST00000531490 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
TRIM53CP-201ENST00000531490 THSD4Q6ZMP0 1018 aa10.57□□□□□ -0.72
TRIM53CP-201ENST00000531490 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
TRIM53CP-201ENST00000531490 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
TRIM53CP-201ENST00000531490 RRBP1Q9P2E9 1410 aaKnown RBP10.57□□□□□ -0.72
TRIM53CP-201ENST00000531490 METP08581 1390 aa10.57□□□□□ -0.72
TRIM53CP-201ENST00000531490 NBPF26B4DH59 902 aa10.56□□□□□ -0.72
TRIM53CP-201ENST00000531490 NUDT18Q6ZVK8 323 aa10.56□□□□□ -0.72
TRIM53CP-201ENST00000531490 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
TRIM53CP-201ENST00000531490 USP21Q9UK80 565 aa10.55□□□□□ -0.72
TRIM53CP-201ENST00000531490 GCC2Q8IWJ2 1684 aa10.55□□□□□ -0.72
TRIM53CP-201ENST00000531490 GPR37O15354 613 aa10.54□□□□□ -0.72
TRIM53CP-201ENST00000531490 PTPN5P54829 565 aa10.54□□□□□ -0.72
TRIM53CP-201ENST00000531490 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
TRIM53CP-201ENST00000531490 ATAD2Q6PL18 1390 aa10.54□□□□□ -0.72
TRIM53CP-201ENST00000531490 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
TRIM53CP-201ENST00000531490 ZNF326Q5BKZ1 582 aaKnown RBP10.53□□□□□ -0.72
TRIM53CP-201ENST00000531490 ORAI2Q96SN7 254 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms