RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
TM9SF1-211ENST00000531406 PARP4Q9UKK3 1724 aaKnown RBP18.21■□□□□ 0.51
TM9SF1-211ENST00000531406 NBPF14Q5TI25 921 aa18.21■□□□□ 0.51
TM9SF1-211ENST00000531406 CARD10Q9BWT7 1032 aa18.21■□□□□ 0.51
TM9SF1-211ENST00000531406 COL18A1P39060 1754 aa18.2■□□□□ 0.5
TM9SF1-211ENST00000531406 CSB-PGBD3P0DP91 1061 aa18.2■□□□□ 0.5
TM9SF1-211ENST00000531406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
TM9SF1-211ENST00000531406 CDCA7Q9BWT1 371 aaPredicted RBP18.2■□□□□ 0.5
TM9SF1-211ENST00000531406 MARCH10Q8NA82 808 aaPredicted RBP18.19■□□□□ 0.5
TM9SF1-211ENST00000531406 NFAT5O94916 1531 aa18.18■□□□□ 0.5
TM9SF1-211ENST00000531406 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
TM9SF1-211ENST00000531406 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
TM9SF1-211ENST00000531406 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
TM9SF1-211ENST00000531406 NME9Q86XW9 330 aa18.17■□□□□ 0.5
TM9SF1-211ENST00000531406 BCL11BQ9C0K0 894 aaPredicted RBP18.17■□□□□ 0.5
TM9SF1-211ENST00000531406 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
TM9SF1-211ENST00000531406 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
TM9SF1-211ENST00000531406 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
TM9SF1-211ENST00000531406 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
TM9SF1-211ENST00000531406 PLSCR1O15162 318 aa18.16■□□□□ 0.5
TM9SF1-211ENST00000531406 PTF1AQ7RTS3 328 aa18.16■□□□□ 0.5
TM9SF1-211ENST00000531406 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
TM9SF1-211ENST00000531406 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
TM9SF1-211ENST00000531406 RREB1Q92766 1687 aa18.15■□□□□ 0.5
TM9SF1-211ENST00000531406 EXOC5O00471 708 aa18.14■□□□□ 0.49
TM9SF1-211ENST00000531406 PUS7Q96PZ0 661 aaKnown RBP18.14■□□□□ 0.49
TM9SF1-211ENST00000531406 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
TM9SF1-211ENST00000531406 BCL9O00512 1426 aa18.14■□□□□ 0.49
TM9SF1-211ENST00000531406 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
TM9SF1-211ENST00000531406 ABCC6O95255 1503 aa18.12■□□□□ 0.49
TM9SF1-211ENST00000531406 NUP188Q5SRE5 1749 aa18.12■□□□□ 0.49
TM9SF1-211ENST00000531406 EDC4Q6P2E9 1401 aaKnown RBP18.11■□□□□ 0.49
TM9SF1-211ENST00000531406 MON2Q7Z3U7 1717 aa18.11■□□□□ 0.49
TM9SF1-211ENST00000531406 ERBB3P21860 1342 aa18.1■□□□□ 0.49
TM9SF1-211ENST00000531406 PROM2Q8N271 834 aa18.1■□□□□ 0.49
TM9SF1-211ENST00000531406 NLRP2Q9NX02 1062 aa18.1■□□□□ 0.49
TM9SF1-211ENST00000531406 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
TM9SF1-211ENST00000531406 TESK2Q96S53 571 aa18.09■□□□□ 0.49
TM9SF1-211ENST00000531406 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
TM9SF1-211ENST00000531406 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
TM9SF1-211ENST00000531406 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.48
TM9SF1-211ENST00000531406 KCNQ2O43526 872 aa18.08■□□□□ 0.48
TM9SF1-211ENST00000531406 ANKRD24Q8TF21 1146 aa18.08■□□□□ 0.48
TM9SF1-211ENST00000531406 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
TM9SF1-211ENST00000531406 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
TM9SF1-211ENST00000531406 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
TM9SF1-211ENST00000531406 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
TM9SF1-211ENST00000531406 RGPD5Q99666 1765 aa18.05■□□□□ 0.48
TM9SF1-211ENST00000531406 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
TM9SF1-211ENST00000531406 IL2RBP14784 551 aa18.05■□□□□ 0.48
TM9SF1-211ENST00000531406 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
TM9SF1-211ENST00000531406 PPP1R1BQ9UD71 204 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-211ENST00000531406 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
TM9SF1-211ENST00000531406 IP6K1Q92551 441 aa18.04■□□□□ 0.48
TM9SF1-211ENST00000531406 RGPD3A6NKT7 1758 aaPredicted RBP18.04■□□□□ 0.48
TM9SF1-211ENST00000531406 RGPD4Q7Z3J3 1758 aa18.04■□□□□ 0.48
TM9SF1-211ENST00000531406 SBF2Q86WG5 1849 aa18.03■□□□□ 0.48
TM9SF1-211ENST00000531406 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.48
TM9SF1-211ENST00000531406 PDGFDQ9GZP0 370 aaPredicted RBP18.02■□□□□ 0.48
TM9SF1-211ENST00000531406 COG3Q96JB2 828 aa18.01■□□□□ 0.47
TM9SF1-211ENST00000531406 STK32BQ9NY57 414 aa18.01■□□□□ 0.47
TM9SF1-211ENST00000531406 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
TM9SF1-211ENST00000531406 SLC15A2Q16348 729 aa17.99■□□□□ 0.47
TM9SF1-211ENST00000531406 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
TM9SF1-211ENST00000531406 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
TM9SF1-211ENST00000531406 FBLN1P23142 703 aa17.98■□□□□ 0.47
TM9SF1-211ENST00000531406 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
TM9SF1-211ENST00000531406 AMPHP49418 695 aa17.97■□□□□ 0.47
TM9SF1-211ENST00000531406 HOXC9P31274 260 aa17.96■□□□□ 0.47
TM9SF1-211ENST00000531406 TMF1P82094 1093 aa17.96■□□□□ 0.47
TM9SF1-211ENST00000531406 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
TM9SF1-211ENST00000531406 LTN1O94822 1766 aa17.96■□□□□ 0.47
TM9SF1-211ENST00000531406 USP47Q96K76 1375 aa17.95■□□□□ 0.46
TM9SF1-211ENST00000531406 PTGER2P43116 358 aa17.95■□□□□ 0.46
TM9SF1-211ENST00000531406 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
TM9SF1-211ENST00000531406 NHSQ6T4R5 1651 aa17.95■□□□□ 0.46
TM9SF1-211ENST00000531406 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
TM9SF1-211ENST00000531406 FYB1O15117 783 aa17.94■□□□□ 0.46
TM9SF1-211ENST00000531406 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
TM9SF1-211ENST00000531406 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
TM9SF1-211ENST00000531406 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
TM9SF1-211ENST00000531406 ZCRB1Q8TBF4 217 aaKnown RBP17.91■□□□□ 0.46
TM9SF1-211ENST00000531406 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
TM9SF1-211ENST00000531406 LRRC4BQ9NT99 713 aa17.91■□□□□ 0.46
TM9SF1-211ENST00000531406 YY1P25490 414 aa17.9■□□□□ 0.46
TM9SF1-211ENST00000531406 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
TM9SF1-211ENST00000531406 RTL1A6NKG5 1358 aa17.9■□□□□ 0.46
TM9SF1-211ENST00000531406 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
TM9SF1-211ENST00000531406 ZNF827Q17R98 1081 aa17.89■□□□□ 0.45
TM9SF1-211ENST00000531406 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
TM9SF1-211ENST00000531406 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
TM9SF1-211ENST00000531406 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
TM9SF1-211ENST00000531406 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
TM9SF1-211ENST00000531406 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
TM9SF1-211ENST00000531406 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
TM9SF1-211ENST00000531406 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-211ENST00000531406 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
TM9SF1-211ENST00000531406 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
TM9SF1-211ENST00000531406 CARD14Q9BXL6 1004 aa17.86■□□□□ 0.45
TM9SF1-211ENST00000531406 FHDC1Q9C0D6 1143 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms