RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 PCDHB9Q9Y5E1 797 aa5.45□□□□□ -1.54
PTPN11-203ENST00000530818 DZIP3Q86Y13 1208 aaKnown RBP5.44□□□□□ -1.54
PTPN11-203ENST00000530818 CYP4X1Q8N118 509 aa5.44□□□□□ -1.54
PTPN11-203ENST00000530818 KCTD15Q96SI1 283 aaPredicted RBP5.44□□□□□ -1.54
PTPN11-203ENST00000530818 CHIC2Q9UKJ5 165 aa5.44□□□□□ -1.54
PTPN11-203ENST00000530818 TTC24A2A3L6 582 aaPredicted RBP5.43□□□□□ -1.54
PTPN11-203ENST00000530818 ARID3CA6NKF2 412 aa5.43□□□□□ -1.54
PTPN11-203ENST00000530818 PIK3CDO00329 1044 aa5.43□□□□□ -1.54
PTPN11-203ENST00000530818 ADH1CP00326 375 aa5.43□□□□□ -1.54
PTPN11-203ENST00000530818 INTS6LQ5JSJ4 861 aaKnown RBP5.43□□□□□ -1.54
PTPN11-203ENST00000530818 VASH1Q7L8A9 365 aaPredicted RBP5.43□□□□□ -1.54
PTPN11-203ENST00000530818 CCDC85AQ96PX6 553 aaPredicted RBP5.43□□□□□ -1.54
PTPN11-203ENST00000530818 UCN2Q96RP3 112 aa5.43□□□□□ -1.54
PTPN11-203ENST00000530818 NRG2O14511 850 aaPredicted RBP5.42□□□□□ -1.54
PTPN11-203ENST00000530818 AVPP01185 164 aa5.42□□□□□ -1.54
PTPN11-203ENST00000530818 EIF4G2P78344 907 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN11-203ENST00000530818 CDCA7Q9BWT1 371 aaPredicted RBP5.42□□□□□ -1.54
PTPN11-203ENST00000530818 TMPRSS4Q9NRS4 437 aa5.42□□□□□ -1.54
PTPN11-203ENST00000530818 ERVH48-1M5A8F1 160 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 FSHRP23945 695 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 ADD1P35611 737 aaKnown RBP5.41□□□□□ -1.54
PTPN11-203ENST00000530818 NR5A1Q13285 461 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 NNTQ13423 1086 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 GLMNQ92990 594 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 SLC10A4Q96EP9 437 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 DACH1Q9UI36 760 aa5.41□□□□□ -1.54
PTPN11-203ENST00000530818 FAM187AA6NFU0 413 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 SUPT5HO00267 1087 aaKnown RBP5.4□□□□□ -1.54
PTPN11-203ENST00000530818 LILRA1O75019 489 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 TIMP2P16035 220 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 MCCD1P59942 119 aaPredicted RBP5.4□□□□□ -1.54
PTPN11-203ENST00000530818 MYT1Q01538 1121 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 SEMA3FQ13275 785 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 PPP1R26Q5T8A7 1209 aaPredicted RBP5.4□□□□□ -1.54
PTPN11-203ENST00000530818 TRAF7Q6Q0C0 670 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 TBC1D9Q6ZT07 1266 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 ITPKCQ96DU7 683 aa5.4□□□□□ -1.54
PTPN11-203ENST00000530818 IRX2Q9BZI1 471 aaPredicted RBP5.4□□□□□ -1.54
PTPN11-203ENST00000530818 DGAT1O75907 488 aa5.39□□□□□ -1.55
PTPN11-203ENST00000530818 SOX11P35716 441 aa5.39□□□□□ -1.55
PTPN11-203ENST00000530818 SCTRP47872 440 aa5.39□□□□□ -1.55
PTPN11-203ENST00000530818 RAB15P59190 212 aa5.39□□□□□ -1.55
PTPN11-203ENST00000530818 KDF1Q8NAX2 398 aaPredicted RBP5.39□□□□□ -1.55
PTPN11-203ENST00000530818 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
PTPN11-203ENST00000530818 CDV3Q9UKY7 258 aaKnown RBP5.39□□□□□ -1.55
PTPN11-203ENST00000530818 WASF2Q9Y6W5 498 aa5.39□□□□□ -1.55
PTPN11-203ENST00000530818 NBPF20Q3BBV1 942 aa5.38□□□□□ -1.55
PTPN11-203ENST00000530818 SEPT12Q8IYM1 358 aa5.38□□□□□ -1.55
PTPN11-203ENST00000530818 CCDC116Q8IYX3 515 aa5.38□□□□□ -1.55
PTPN11-203ENST00000530818 AAASQ9NRG9 546 aa5.38□□□□□ -1.55
PTPN11-203ENST00000530818 ST8SIA5O15466 376 aa5.37□□□□□ -1.55
PTPN11-203ENST00000530818 SMCPP49901 116 aaPredicted RBP5.37□□□□□ -1.55
PTPN11-203ENST00000530818 CBLBQ13191 982 aa5.37□□□□□ -1.55
PTPN11-203ENST00000530818 WWC1Q8IX03 1113 aa5.37□□□□□ -1.55
PTPN11-203ENST00000530818 ZNF784Q8NCA9 323 aaPredicted RBP5.37□□□□□ -1.55
PTPN11-203ENST00000530818 CALR3Q96L12 384 aaKnown RBP5.37□□□□□ -1.55
PTPN11-203ENST00000530818 TFIP11Q9UBB9 837 aaKnown RBP5.37□□□□□ -1.55
PTPN11-203ENST00000530818 ZIC2O95409 532 aaPredicted RBP5.36□□□□□ -1.55
PTPN11-203ENST00000530818 WDR4P57081 412 aaKnown RBP5.36□□□□□ -1.55
PTPN11-203ENST00000530818 SRPK2P78362 688 aaKnown RBP5.36□□□□□ -1.55
PTPN11-203ENST00000530818 LAPTM4AQ15012 233 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 PKDCCQ504Y2 493 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 CFAP70Q5T0N1 1121 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 Q6ZVU0 165 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 RNF135Q8IUD6 432 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 CRIPAKQ8N1N5 446 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 PPP1R12CQ9BZL4 782 aa5.36□□□□□ -1.55
PTPN11-203ENST00000530818 PALM3A6NDB9 673 aaPredicted RBP5.35□□□□□ -1.55
PTPN11-203ENST00000530818 STAU1O95793 577 aaKnown RBP5.35□□□□□ -1.55
PTPN11-203ENST00000530818 ERVK-9P63128 1117 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 SLFNL1Q499Z3 407 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 TRIM46Q7Z4K8 759 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 DEPDC4Q8N2C3 294 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 OSBPL3Q9H4L5 887 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 PCDHB11Q9Y5F2 797 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 EMILIN1Q9Y6C2 1016 aa5.35□□□□□ -1.55
PTPN11-203ENST00000530818 POTECB2RU33 542 aa5.34□□□□□ -1.55
PTPN11-203ENST00000530818 ZBTB7BO15156 539 aaPredicted RBP5.34□□□□□ -1.55
PTPN11-203ENST00000530818 CAPN5O15484 640 aaPredicted RBP5.34□□□□□ -1.55
PTPN11-203ENST00000530818 SKIP12755 728 aa5.34□□□□□ -1.55
PTPN11-203ENST00000530818 KANK4Q5T7N3 995 aaPredicted RBP5.34□□□□□ -1.55
PTPN11-203ENST00000530818 RNF20Q5VTR2 975 aa5.34□□□□□ -1.55
PTPN11-203ENST00000530818 ERICH6Q7L0X2 663 aa5.34□□□□□ -1.55
PTPN11-203ENST00000530818 NFATC2IPQ8NCF5 419 aa5.34□□□□□ -1.55
PTPN11-203ENST00000530818 CYLDQ9NQC7 956 aa5.34□□□□□ -1.55
PTPN11-203ENST00000530818 MAFBQ9Y5Q3 323 aaPredicted RBP5.34□□□□□ -1.55
PTPN11-203ENST00000530818 ATP9BO43861 1147 aa5.33□□□□□ -1.56
PTPN11-203ENST00000530818 DHX9Q08211 1270 aaKnown RBP5.33□□□□□ -1.56
PTPN11-203ENST00000530818 Q6ZNB5 142 aa5.33□□□□□ -1.56
PTPN11-203ENST00000530818 AGBL1Q96MI9 1066 aa5.33□□□□□ -1.56
PTPN11-203ENST00000530818 PCDHGA11Q9Y5H2 935 aa5.33□□□□□ -1.56
PTPN11-203ENST00000530818 USP17L5A8MUK1 530 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 AXIN1O15169 862 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 DKK1O94907 266 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 BMP1P13497 986 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 NCOA4Q13772 614 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 CTC1Q2NKJ3 1217 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 MAP7D1Q3KQU3 841 aa5.32□□□□□ -1.56
PTPN11-203ENST00000530818 OXLD1Q5BKU9 147 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms