RNA–Protein interactions for RNA: ENST00000530448.5

LETM2-215, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, human

TSL 2

Gene LETM2, Length 650 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETM2-215	ENST00000530448	SOX12	O15370	315 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	MYT1	Q01538	1121 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	WAPL	Q7Z5K2	1190 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	MICALL2	Q8IY33	904 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	STK26	Q9P289	416 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	ERBB3	P21860	1342 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	HAP1	P54257	671 aa	Predicted RBP	13.63	□□□□□ -0.23
LETM2-215	ENST00000530448	VPS72	Q15906	364 aa		13.63	□□□□□ -0.23
LETM2-215	ENST00000530448	PLEKHH1	Q9ULM0	1364 aa		13.62	□□□□□ -0.23
LETM2-215	ENST00000530448	BAG6	P46379	1132 aa		13.62	□□□□□ -0.23
LETM2-215	ENST00000530448	FMN2	Q9NZ56	1722 aa		13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	NWD2	Q9ULI1	1742 aa		13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	RGPD8	O14715	1765 aa	Predicted RBP	13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	KIF1A	Q12756	1690 aa		13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	EN1	Q05925	392 aa	Predicted RBP	13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	R3HDM1	Q15032	1099 aa	Known RBP	13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	KRT28	Q7Z3Y7	464 aa		13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	CCDC144A	A2RUR9	1427 aa		13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	ABCA3	Q99758	1704 aa		13.61	□□□□□ -0.23
LETM2-215	ENST00000530448	FAM182B	Q5T319	152 aa		13.6	□□□□□ -0.23
LETM2-215	ENST00000530448	TNS3	Q68CZ2	1445 aa		13.59	□□□□□ -0.23
LETM2-215	ENST00000530448	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.59	□□□□□ -0.23
LETM2-215	ENST00000530448	ONECUT3	O60422	494 aa	Predicted RBP	13.59	□□□□□ -0.23
LETM2-215	ENST00000530448	RNF25	Q96BH1	459 aa	Predicted RBP	13.59	□□□□□ -0.23
LETM2-215	ENST00000530448	ZFP91	Q96JP5	570 aa	Predicted RBP	13.59	□□□□□ -0.23
LETM2-215	ENST00000530448	RPGRIP1L	Q68CZ1	1315 aa		13.59	□□□□□ -0.23
LETM2-215	ENST00000530448	FAM98C	Q17RN3	349 aa	Known RBP	13.58	□□□□□ -0.24
LETM2-215	ENST00000530448	LMOD2	Q6P5Q4	547 aa		13.58	□□□□□ -0.24
LETM2-215	ENST00000530448	TMEM92	Q6UXU6	159 aa		13.58	□□□□□ -0.24
LETM2-215	ENST00000530448	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.58	□□□□□ -0.24
LETM2-215	ENST00000530448	RGPD1	P0DJD0	1748 aa		13.58	□□□□□ -0.24
LETM2-215	ENST00000530448	ADGRF5	Q8IZF2	1346 aa		13.58	□□□□□ -0.24
LETM2-215	ENST00000530448	TECPR2	O15040	1411 aa		13.57	□□□□□ -0.24
LETM2-215	ENST00000530448	TMEM132E	Q6IEE7	984 aa		13.57	□□□□□ -0.24
LETM2-215	ENST00000530448	ZSWIM6	Q9HCJ5	1215 aa		13.57	□□□□□ -0.24
LETM2-215	ENST00000530448	NRAP	Q86VF7	1730 aa		13.56	□□□□□ -0.24
LETM2-215	ENST00000530448	IFT172	Q9UG01	1749 aa		13.56	□□□□□ -0.24
LETM2-215	ENST00000530448	FAM83G	A6ND36	823 aa		13.56	□□□□□ -0.24
LETM2-215	ENST00000530448	MS4A4A	Q96JQ5	239 aa		13.56	□□□□□ -0.24
LETM2-215	ENST00000530448	KNDC1	Q76NI1	1749 aa		13.56	□□□□□ -0.24
LETM2-215	ENST00000530448	TNS1	Q9HBL0	1735 aa	Known RBP	13.56	□□□□□ -0.24
LETM2-215	ENST00000530448	PHF8	Q9UPP1	1060 aa		13.55	□□□□□ -0.24
LETM2-215	ENST00000530448	VARS2	Q5ST30	1063 aa	Known RBP	13.54	□□□□□ -0.24
LETM2-215	ENST00000530448	RRBP1	Q9P2E9	1410 aa	Known RBP	13.54	□□□□□ -0.24
LETM2-215	ENST00000530448	YY1	P25490	414 aa		13.53	□□□□□ -0.24
LETM2-215	ENST00000530448	PSME1	Q06323	249 aa		13.53	□□□□□ -0.24
LETM2-215	ENST00000530448	EZH2	Q15910	746 aa	Known RBP	13.53	□□□□□ -0.24
LETM2-215	ENST00000530448	BTG4	Q9NY30	223 aa		13.53	□□□□□ -0.24
LETM2-215	ENST00000530448	ABCC11	Q96J66	1382 aa		13.53	□□□□□ -0.24
LETM2-215	ENST00000530448	RGL3	Q3MIN7	710 aa		13.52	□□□□□ -0.25
LETM2-215	ENST00000530448	SBNO1	A3KN83	1393 aa		13.52	□□□□□ -0.25
LETM2-215	ENST00000530448	NRXN1	Q9ULB1	1477 aa		13.51	□□□□□ -0.25
LETM2-215	ENST00000530448	ARHGEF10	O15013	1369 aa		13.51	□□□□□ -0.25
LETM2-215	ENST00000530448	DISP2	A7MBM2	1401 aa		13.5	□□□□□ -0.25
LETM2-215	ENST00000530448	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.5	□□□□□ -0.25
LETM2-215	ENST00000530448	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
LETM2-215	ENST00000530448	THSD7A	Q9UPZ6	1657 aa		13.5	□□□□□ -0.25
LETM2-215	ENST00000530448	PMFBP1	Q8TBY8	1022 aa		13.49	□□□□□ -0.25
LETM2-215	ENST00000530448	COL14A1	Q05707	1796 aa	Known RBP	13.49	□□□□□ -0.25
LETM2-215	ENST00000530448	SPATA31A5	Q5VU36	1347 aa		13.48	□□□□□ -0.25
LETM2-215	ENST00000530448	SPATA31A7	Q8IWB4	1347 aa		13.48	□□□□□ -0.25
LETM2-215	ENST00000530448	TRIM37	O94972	964 aa		13.48	□□□□□ -0.25
LETM2-215	ENST00000530448	GPR153	Q6NV75	609 aa		13.48	□□□□□ -0.25
LETM2-215	ENST00000530448	PIK3C2G	O75747	1445 aa		13.47	□□□□□ -0.25
LETM2-215	ENST00000530448	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.47	□□□□□ -0.25
LETM2-215	ENST00000530448	ADGRB2	O60241	1585 aa		13.47	□□□□□ -0.25
LETM2-215	ENST00000530448	CAMKK2	Q96RR4	588 aa		13.47	□□□□□ -0.25
LETM2-215	ENST00000530448	TAOK2	Q9UL54	1235 aa		13.47	□□□□□ -0.25
LETM2-215	ENST00000530448	SPATA31E1	Q6ZUB1	1445 aa		13.47	□□□□□ -0.25
LETM2-215	ENST00000530448	ALS2	Q96Q42	1657 aa		13.46	□□□□□ -0.26
LETM2-215	ENST00000530448	ANKRD30B	Q9BXX2	1392 aa		13.45	□□□□□ -0.26
LETM2-215	ENST00000530448	NLRP6	P59044	892 aa		13.45	□□□□□ -0.26
LETM2-215	ENST00000530448	ZNF687	Q8N1G0	1237 aa		13.45	□□□□□ -0.26
LETM2-215	ENST00000530448	NUP188	Q5SRE5	1749 aa		13.44	□□□□□ -0.26
LETM2-215	ENST00000530448	APBA3	O96018	575 aa		13.44	□□□□□ -0.26
LETM2-215	ENST00000530448	PRAM1	Q96QH2	718 aa		13.44	□□□□□ -0.26
LETM2-215	ENST00000530448	CRYBG1	Q9Y4K1	1723 aa		13.44	□□□□□ -0.26
LETM2-215	ENST00000530448	RREB1	Q92766	1687 aa		13.44	□□□□□ -0.26
LETM2-215	ENST00000530448	RNF166	Q96A37	237 aa	Predicted RBP	13.43	□□□□□ -0.26
LETM2-215	ENST00000530448	FAM196A	Q6ZSG2	479 aa		13.42	□□□□□ -0.26
LETM2-215	ENST00000530448	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.42	□□□□□ -0.26
LETM2-215	ENST00000530448	PRDM11	Q9NQV5	511 aa		13.42	□□□□□ -0.26
LETM2-215	ENST00000530448	CAMTA1	Q9Y6Y1	1673 aa		13.42	□□□□□ -0.26
LETM2-215	ENST00000530448	CFAP70	Q5T0N1	1121 aa		13.41	□□□□□ -0.26
LETM2-215	ENST00000530448	SIRT1	Q96EB6	747 aa		13.41	□□□□□ -0.26
LETM2-215	ENST00000530448	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.41	□□□□□ -0.26
LETM2-215	ENST00000530448	STRN4	Q9NRL3	753 aa		13.41	□□□□□ -0.26
LETM2-215	ENST00000530448	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.41	□□□□□ -0.26
LETM2-215	ENST00000530448	SPATA31A1	Q5TZJ5	1347 aa		13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	ANKAR	Q7Z5J8	1434 aa		13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	CHRNA2	Q15822	529 aa		13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	C14orf93	Q9H972	538 aa	Known RBP	13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	USP35	Q9P2H5	1018 aa		13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	GPRASP1	Q5JY77	1395 aa		13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	PARD3	Q8TEW0	1356 aa		13.4	□□□□□ -0.26
LETM2-215	ENST00000530448	PRR36	Q9H6K5	1346 aa		13.39	□□□□□ -0.27
LETM2-215	ENST00000530448	ACIN1	Q9UKV3	1341 aa	Known RBP	13.39	□□□□□ -0.27
LETM2-215	ENST00000530448	ARSI	Q5FYB1	569 aa		13.39	□□□□□ -0.27
LETM2-215	ENST00000530448	FBXO22	Q8NEZ5	403 aa		13.39	□□□□□ -0.27
LETM2-215	ENST00000530448	POGK	Q9P215	609 aa		13.39	□□□□□ -0.27

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