RNA–Protein interactions for RNA: ENST00000530369.1

USP47-210, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-210ENST00000530369 DHX9Q08211 1270 aaKnown RBP7.04□□□□□ -1.28
USP47-210ENST00000530369 RB1CC1Q8TDY2 1594 aa7.03□□□□□ -1.28
USP47-210ENST00000530369 FSHRP23945 695 aa7.03□□□□□ -1.28
USP47-210ENST00000530369 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
USP47-210ENST00000530369 RNF20Q5VTR2 975 aa7.03□□□□□ -1.28
USP47-210ENST00000530369 SEPT12Q8IYM1 358 aa7.02□□□□□ -1.29
USP47-210ENST00000530369 KCTD15Q96SI1 283 aaPredicted RBP7.02□□□□□ -1.29
USP47-210ENST00000530369 J3QL48 77 aa7.01□□□□□ -1.29
USP47-210ENST00000530369 SMPD1P17405 629 aa7.01□□□□□ -1.29
USP47-210ENST00000530369 SEMA3FQ13275 785 aa7.01□□□□□ -1.29
USP47-210ENST00000530369 NNTQ13423 1086 aa7.01□□□□□ -1.29
USP47-210ENST00000530369 PROSER2Q86WR7 435 aaPredicted RBP7.01□□□□□ -1.29
USP47-210ENST00000530369 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
USP47-210ENST00000530369 A6NJR5 290 aa7□□□□□ -1.29
USP47-210ENST00000530369 GPR37L1O60883 481 aa7□□□□□ -1.29
USP47-210ENST00000530369 IRF5Q13568 498 aa7□□□□□ -1.29
USP47-210ENST00000530369 CCDC116Q8IYX3 515 aa7□□□□□ -1.29
USP47-210ENST00000530369 OCSTAMPQ9BR26 566 aa7□□□□□ -1.29
USP47-210ENST00000530369 EMILIN1Q9Y6C2 1016 aa7□□□□□ -1.29
USP47-210ENST00000530369 AVPP01185 164 aa6.99□□□□□ -1.29
USP47-210ENST00000530369 VAC14Q08AM6 782 aa6.99□□□□□ -1.29
USP47-210ENST00000530369 POM121Q96HA1 1249 aa6.99□□□□□ -1.29
USP47-210ENST00000530369 AXIN1O15169 862 aa6.98□□□□□ -1.29
USP47-210ENST00000530369 ESF1Q9H501 851 aaKnown RBP6.98□□□□□ -1.29
USP47-210ENST00000530369 GRM5P41594 1212 aa6.97□□□□□ -1.29
USP47-210ENST00000530369 WDR4P57081 412 aaKnown RBP6.97□□□□□ -1.29
USP47-210ENST00000530369 SLFNL1Q499Z3 407 aa6.97□□□□□ -1.29
USP47-210ENST00000530369 INTS6LQ5JSJ4 861 aaKnown RBP6.97□□□□□ -1.29
USP47-210ENST00000530369 ZNF787Q6DD87 383 aa6.97□□□□□ -1.29
USP47-210ENST00000530369 CRIPAKQ8N1N5 446 aa6.97□□□□□ -1.29
USP47-210ENST00000530369 CLUAP1Q96AJ1 413 aa6.97□□□□□ -1.29
USP47-210ENST00000530369 NACADO15069 1562 aa6.96□□□□□ -1.29
USP47-210ENST00000530369 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
USP47-210ENST00000530369 UPP2O95045 317 aa6.96□□□□□ -1.3
USP47-210ENST00000530369 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
USP47-210ENST00000530369 C14orf37Q86TY3 774 aa6.96□□□□□ -1.3
USP47-210ENST00000530369 HPS1Q92902 700 aa6.96□□□□□ -1.3
USP47-210ENST00000530369 ESPNB1AK53 854 aa6.95□□□□□ -1.3
USP47-210ENST00000530369 RAB15P59190 212 aa6.95□□□□□ -1.3
USP47-210ENST00000530369 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
USP47-210ENST00000530369 ZIC2O95409 532 aaPredicted RBP6.94□□□□□ -1.3
USP47-210ENST00000530369 MYT1Q01538 1121 aa6.94□□□□□ -1.3
USP47-210ENST00000530369 PPP1R26Q5T8A7 1209 aaPredicted RBP6.94□□□□□ -1.3
USP47-210ENST00000530369 RNF135Q8IUD6 432 aa6.94□□□□□ -1.3
USP47-210ENST00000530369 SIRT1Q96EB6 747 aa6.94□□□□□ -1.3
USP47-210ENST00000530369 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
USP47-210ENST00000530369 GIGYF1O75420 1035 aaPredicted RBP6.93□□□□□ -1.3
USP47-210ENST00000530369 NR3C2P08235 984 aa6.93□□□□□ -1.3
USP47-210ENST00000530369 TIMP2P16035 220 aa6.93□□□□□ -1.3
USP47-210ENST00000530369 SCARF1Q14162 830 aa6.93□□□□□ -1.3
USP47-210ENST00000530369 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
USP47-210ENST00000530369 ERVH48-1M5A8F1 160 aa6.92□□□□□ -1.3
USP47-210ENST00000530369 MYCP01106 439 aaPredicted RBP6.92□□□□□ -1.3
USP47-210ENST00000530369 DOLKQ9UPQ8 538 aa6.92□□□□□ -1.3
USP47-210ENST00000530369 PCDHB11Q9Y5F2 797 aa6.92□□□□□ -1.3
USP47-210ENST00000530369 MAP7D1Q3KQU3 841 aa6.91□□□□□ -1.3
USP47-210ENST00000530369 FNBP4Q8N3X1 1017 aaPredicted RBP6.91□□□□□ -1.3
USP47-210ENST00000530369 ITPKCQ96DU7 683 aa6.91□□□□□ -1.3
USP47-210ENST00000530369 SENP2Q9HC62 589 aa6.91□□□□□ -1.3
USP47-210ENST00000530369 AAASQ9NRG9 546 aa6.91□□□□□ -1.3
USP47-210ENST00000530369 TRAK2O60296 914 aa6.9□□□□□ -1.3
USP47-210ENST00000530369 NFATC2IPQ8NCF5 419 aa6.9□□□□□ -1.3
USP47-210ENST00000530369 KIFC2Q96AC6 838 aa6.9□□□□□ -1.3
USP47-210ENST00000530369 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
USP47-210ENST00000530369 TSEN34Q9BSV6 310 aaKnown RBP6.9□□□□□ -1.3
USP47-210ENST00000530369 ALG2Q9H553 416 aa6.9□□□□□ -1.3
USP47-210ENST00000530369 ST8SIA5O15466 376 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
USP47-210ENST00000530369 HDGFL1Q5TGJ6 251 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 CC2D2BQ6DHV5 1058 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 MEIOBQ8N635 442 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 ZNF784Q8NCA9 323 aaPredicted RBP6.89□□□□□ -1.31
USP47-210ENST00000530369 GLMNQ92990 594 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
USP47-210ENST00000530369 POM121CA8CG34 1229 aa6.88□□□□□ -1.31
USP47-210ENST00000530369 USP4Q13107 963 aa6.88□□□□□ -1.31
USP47-210ENST00000530369 MRPL14Q6P1L8 145 aaKnown RBP6.88□□□□□ -1.31
USP47-210ENST00000530369 KLF16Q9BXK1 252 aaPredicted RBP6.88□□□□□ -1.31
USP47-210ENST00000530369 ATP13A2Q9NQ11 1180 aa6.88□□□□□ -1.31
USP47-210ENST00000530369 CYLDQ9NQC7 956 aa6.88□□□□□ -1.31
USP47-210ENST00000530369 ADH1AP07327 375 aa6.87□□□□□ -1.31
USP47-210ENST00000530369 ERVK-9P63128 1117 aa6.87□□□□□ -1.31
USP47-210ENST00000530369 EML3Q32P44 896 aa6.87□□□□□ -1.31
USP47-210ENST00000530369 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
USP47-210ENST00000530369 PLPP7Q8NBV4 271 aa6.87□□□□□ -1.31
USP47-210ENST00000530369 TMPRSS4Q9NRS4 437 aa6.87□□□□□ -1.31
USP47-210ENST00000530369 BMP2P12643 396 aa6.86□□□□□ -1.31
USP47-210ENST00000530369 SKIP12755 728 aa6.86□□□□□ -1.31
USP47-210ENST00000530369 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
USP47-210ENST00000530369 Q6ZVU0 165 aa6.86□□□□□ -1.31
USP47-210ENST00000530369 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
USP47-210ENST00000530369 BMP1P13497 986 aa6.84□□□□□ -1.31
USP47-210ENST00000530369 CBLBQ13191 982 aa6.84□□□□□ -1.31
USP47-210ENST00000530369 LCE2AQ5TA79 106 aaPredicted RBP6.84□□□□□ -1.31
USP47-210ENST00000530369 TRIM50Q86XT4 487 aa6.84□□□□□ -1.31
USP47-210ENST00000530369 PHTF2Q8N3S3 785 aa6.84□□□□□ -1.31
USP47-210ENST00000530369 CCDC85AQ96PX6 553 aaPredicted RBP6.84□□□□□ -1.31
USP47-210ENST00000530369 ZNF777Q9ULD5 760 aaPredicted RBP6.84□□□□□ -1.31
USP47-210ENST00000530369 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms