RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 DLC1Q96QB1 1528 aa12.8□□□□□ -0.36
KDM2A-212ENST00000530342 FMN2Q9NZ56 1722 aa12.8□□□□□ -0.36
KDM2A-212ENST00000530342 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
KDM2A-212ENST00000530342 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
KDM2A-212ENST00000530342 MTHFSP49914 203 aa12.79□□□□□ -0.36
KDM2A-212ENST00000530342 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
KDM2A-212ENST00000530342 ITSN1Q15811 1721 aa12.79□□□□□ -0.36
KDM2A-212ENST00000530342 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
KDM2A-212ENST00000530342 XRCC6P12956 609 aaKnown RBP eCLIP12.79□□□□□ -0.36
KDM2A-212ENST00000530342 SOX12O15370 315 aa12.78□□□□□ -0.36
KDM2A-212ENST00000530342 TRIM27P14373 513 aa12.78□□□□□ -0.36
KDM2A-212ENST00000530342 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
KDM2A-212ENST00000530342 MARF1Q9Y4F3 1742 aaKnown RBP12.78□□□□□ -0.36
KDM2A-212ENST00000530342 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
KDM2A-212ENST00000530342 PEAK1Q9H792 1746 aa12.78□□□□□ -0.36
KDM2A-212ENST00000530342 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.36
KDM2A-212ENST00000530342 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.36
KDM2A-212ENST00000530342 EVC2Q86UK5 1308 aa12.77□□□□□ -0.36
KDM2A-212ENST00000530342 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
KDM2A-212ENST00000530342 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
KDM2A-212ENST00000530342 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
KDM2A-212ENST00000530342 BCL2L13Q9BXK5 485 aa12.76□□□□□ -0.37
KDM2A-212ENST00000530342 IL16Q14005 1332 aa12.76□□□□□ -0.37
KDM2A-212ENST00000530342 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
KDM2A-212ENST00000530342 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
KDM2A-212ENST00000530342 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
KDM2A-212ENST00000530342 ZBTB7CA1YPR0 619 aa12.75□□□□□ -0.37
KDM2A-212ENST00000530342 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
KDM2A-212ENST00000530342 XRN1Q8IZH2 1706 aaKnown RBP12.75□□□□□ -0.37
KDM2A-212ENST00000530342 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
KDM2A-212ENST00000530342 RGS12O14924 1447 aa12.75□□□□□ -0.37
KDM2A-212ENST00000530342 SLIT1O75093 1534 aa12.75□□□□□ -0.37
KDM2A-212ENST00000530342 MCM4P33991 863 aa12.75□□□□□ -0.37
KDM2A-212ENST00000530342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
KDM2A-212ENST00000530342 SLKQ9H2G2 1235 aaPredicted RBP12.75□□□□□ -0.37
KDM2A-212ENST00000530342 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
KDM2A-212ENST00000530342 PTPRUQ92729 1446 aa12.75□□□□□ -0.37
KDM2A-212ENST00000530342 RBM10P98175 930 aaKnown RBP12.74□□□□□ -0.37
KDM2A-212ENST00000530342 MORC1Q86VD1 984 aa12.74□□□□□ -0.37
KDM2A-212ENST00000530342 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
KDM2A-212ENST00000530342 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
KDM2A-212ENST00000530342 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
KDM2A-212ENST00000530342 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
KDM2A-212ENST00000530342 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
KDM2A-212ENST00000530342 CRYBG1Q9Y4K1 1723 aa12.73□□□□□ -0.37
KDM2A-212ENST00000530342 WASLO00401 505 aaPredicted RBP12.73□□□□□ -0.37
KDM2A-212ENST00000530342 FOXO3O43524 673 aa12.73□□□□□ -0.37
KDM2A-212ENST00000530342 NUCB1Q02818 461 aa12.73□□□□□ -0.37
KDM2A-212ENST00000530342 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
KDM2A-212ENST00000530342 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
KDM2A-212ENST00000530342 ATP7BP35670 1465 aa12.72□□□□□ -0.37
KDM2A-212ENST00000530342 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
KDM2A-212ENST00000530342 SNX21Q969T3 373 aa12.72□□□□□ -0.37
KDM2A-212ENST00000530342 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
KDM2A-212ENST00000530342 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
KDM2A-212ENST00000530342 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
KDM2A-212ENST00000530342 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
KDM2A-212ENST00000530342 ORAI2Q96SN7 254 aa12.71□□□□□ -0.37
KDM2A-212ENST00000530342 BECN1Q14457 450 aa12.71□□□□□ -0.38
KDM2A-212ENST00000530342 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.38
KDM2A-212ENST00000530342 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.38
KDM2A-212ENST00000530342 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
KDM2A-212ENST00000530342 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
KDM2A-212ENST00000530342 CDK12Q9NYV4 1490 aaPredicted RBP12.7□□□□□ -0.38
KDM2A-212ENST00000530342 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
KDM2A-212ENST00000530342 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
KDM2A-212ENST00000530342 CLEC17AQ6ZS10 378 aa12.7□□□□□ -0.38
KDM2A-212ENST00000530342 CPSF1Q10570 1443 aaKnown RBP12.7□□□□□ -0.38
KDM2A-212ENST00000530342 USP54Q70EL1 1684 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 MSH6P52701 1360 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 PSME1Q06323 249 aa12.69□□□□□ -0.38
KDM2A-212ENST00000530342 CPS1P31327 1500 aa12.68□□□□□ -0.38
KDM2A-212ENST00000530342 FYB1O15117 783 aa12.68□□□□□ -0.38
KDM2A-212ENST00000530342 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
KDM2A-212ENST00000530342 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
KDM2A-212ENST00000530342 CLCN1P35523 988 aa12.68□□□□□ -0.38
KDM2A-212ENST00000530342 HDGFL2Q7Z4V5 671 aaPredicted RBP12.68□□□□□ -0.38
KDM2A-212ENST00000530342 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
KDM2A-212ENST00000530342 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
KDM2A-212ENST00000530342 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
KDM2A-212ENST00000530342 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
KDM2A-212ENST00000530342 ABCC4O15439 1325 aa12.67□□□□□ -0.38
KDM2A-212ENST00000530342 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
KDM2A-212ENST00000530342 RAB3GAP1Q15042 981 aa12.67□□□□□ -0.38
KDM2A-212ENST00000530342 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
KDM2A-212ENST00000530342 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
KDM2A-212ENST00000530342 ZBTB7BO15156 539 aaPredicted RBP12.66□□□□□ -0.38
KDM2A-212ENST00000530342 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
KDM2A-212ENST00000530342 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
KDM2A-212ENST00000530342 TERF2IPQ9NYB0 399 aa12.66□□□□□ -0.38
KDM2A-212ENST00000530342 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.66□□□□□ -0.38
KDM2A-212ENST00000530342 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
KDM2A-212ENST00000530342 CHMP5Q9NZZ3 219 aa12.65□□□□□ -0.38
KDM2A-212ENST00000530342 DDX19BQ9UMR2 479 aa12.65□□□□□ -0.38
KDM2A-212ENST00000530342 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 471.7 ms