RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
TRIM49D1-202ENST00000530311 PPIP5K1Q6PFW1 1433 aa11.61□□□□□ -0.55
TRIM49D1-202ENST00000530311 CHMP5Q9NZZ3 219 aa11.6□□□□□ -0.55
TRIM49D1-202ENST00000530311 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
TRIM49D1-202ENST00000530311 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
TRIM49D1-202ENST00000530311 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
TRIM49D1-202ENST00000530311 KIF20BQ96Q89 1820 aa11.59□□□□□ -0.55
TRIM49D1-202ENST00000530311 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
TRIM49D1-202ENST00000530311 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
TRIM49D1-202ENST00000530311 FAM69CQ0P6D2 419 aa11.59□□□□□ -0.55
TRIM49D1-202ENST00000530311 HSCBQ8IWL3 235 aa11.59□□□□□ -0.55
TRIM49D1-202ENST00000530311 IFT57Q9NWB7 429 aa11.59□□□□□ -0.55
TRIM49D1-202ENST00000530311 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
TRIM49D1-202ENST00000530311 GNAI1P63096 354 aa11.58□□□□□ -0.56
TRIM49D1-202ENST00000530311 TWISTNBQ3B726 338 aaPredicted RBP11.58□□□□□ -0.56
TRIM49D1-202ENST00000530311 NUDT16Q96DE0 195 aaKnown RBP11.58□□□□□ -0.56
TRIM49D1-202ENST00000530311 KIF2CQ99661 725 aa11.58□□□□□ -0.56
TRIM49D1-202ENST00000530311 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
TRIM49D1-202ENST00000530311 CDC42BPGQ6DT37 1551 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 A2ML1A8K2U0 1454 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 METP08581 1390 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 BMP2KLQ5H9B9 411 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 TRAK2O60296 914 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 XRCC6P12956 609 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
TRIM49D1-202ENST00000530311 ATP7BP35670 1465 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 SETD1AO15047 1707 aaKnown RBP11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 CPSF1Q10570 1443 aaKnown RBP11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 TBC1D9Q6ZT07 1266 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 COG3Q96JB2 828 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 ABCC4O15439 1325 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
TRIM49D1-202ENST00000530311 PTCH1Q13635 1447 aa11.55□□□□□ -0.56
TRIM49D1-202ENST00000530311 DDIT3P35638 169 aa11.55□□□□□ -0.56
TRIM49D1-202ENST00000530311 CALD1Q05682 793 aaKnown RBP11.55□□□□□ -0.56
TRIM49D1-202ENST00000530311 CPS1P31327 1500 aa11.55□□□□□ -0.56
TRIM49D1-202ENST00000530311 PIK3R4Q99570 1358 aa11.55□□□□□ -0.56
TRIM49D1-202ENST00000530311 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
TRIM49D1-202ENST00000530311 EDC4Q6P2E9 1401 aaKnown RBP11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 L1TD1Q5T7N2 865 aaKnown RBP11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 C16orf71Q8IYS4 520 aaPredicted RBP11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 SNX21Q969T3 373 aa11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 NUTM2FA1L443 756 aa11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 GOLGA6L3A6NEY3 463 aa11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 RRAGDQ9NQL2 400 aaPredicted RBP11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
TRIM49D1-202ENST00000530311 AGLP35573 1532 aa11.53□□□□□ -0.56
TRIM49D1-202ENST00000530311 DLC1Q96QB1 1528 aa11.53□□□□□ -0.56
TRIM49D1-202ENST00000530311 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
TRIM49D1-202ENST00000530311 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
TRIM49D1-202ENST00000530311 PRR36Q9H6K5 1346 aa11.53□□□□□ -0.56
TRIM49D1-202ENST00000530311 SPATA31D1Q6ZQQ2 1576 aa11.53□□□□□ -0.56
TRIM49D1-202ENST00000530311 SULT6B1Q6IMI4 303 aa11.52□□□□□ -0.56
TRIM49D1-202ENST00000530311 MCM10Q7L590 875 aa11.52□□□□□ -0.56
TRIM49D1-202ENST00000530311 NCOA3Q9Y6Q9 1424 aa11.52□□□□□ -0.56
TRIM49D1-202ENST00000530311 KIF13AQ9H1H9 1805 aa11.52□□□□□ -0.57
TRIM49D1-202ENST00000530311 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.57
TRIM49D1-202ENST00000530311 API5Q9BZZ5 524 aaKnown RBP11.52□□□□□ -0.57
TRIM49D1-202ENST00000530311 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
TRIM49D1-202ENST00000530311 SOX12O15370 315 aa11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 LMOD3Q0VAK6 560 aa11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 CHMP4BQ9H444 224 aaKnown RBP11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
TRIM49D1-202ENST00000530311 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
TRIM49D1-202ENST00000530311 APBB1O00213 710 aa11.5□□□□□ -0.57
TRIM49D1-202ENST00000530311 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
TRIM49D1-202ENST00000530311 DCTPP1Q9H773 170 aa11.5□□□□□ -0.57
TRIM49D1-202ENST00000530311 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
TRIM49D1-202ENST00000530311 HSP90AB2PQ58FF8 381 aa11.49□□□□□ -0.57
TRIM49D1-202ENST00000530311 GAS2L2Q8NHY3 880 aa11.49□□□□□ -0.57
TRIM49D1-202ENST00000530311 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 CDC45O75419 566 aa11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 INTS3Q68E01 1043 aaKnown RBP11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 KNDC1Q76NI1 1749 aa11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 K7ELQ4 463 aaPredicted RBP11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 CHL1O00533 1208 aa11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIM49D1-202ENST00000530311 TTC21BQ7Z4L5 1316 aa11.47□□□□□ -0.57
TRIM49D1-202ENST00000530311 FOXO3O43524 673 aa11.47□□□□□ -0.57
TRIM49D1-202ENST00000530311 SSFA2P28290 1259 aa11.47□□□□□ -0.57
TRIM49D1-202ENST00000530311 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
TRIM49D1-202ENST00000530311 ACEP12821 1306 aa11.47□□□□□ -0.57
TRIM49D1-202ENST00000530311 TTC22Q5TAA0 569 aa11.47□□□□□ -0.57
TRIM49D1-202ENST00000530311 CEP85Q6P2H3 762 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms