RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-213ENST00000530120 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
CSRP1-213ENST00000530120 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
CSRP1-213ENST00000530120 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
CSRP1-213ENST00000530120 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
CSRP1-213ENST00000530120 SRPK2P78362 688 aaKnown RBP17.21■□□□□ 0.35
CSRP1-213ENST00000530120 TOM1L2Q6ZVM7 507 aa17.21■□□□□ 0.35
CSRP1-213ENST00000530120 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
CSRP1-213ENST00000530120 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
CSRP1-213ENST00000530120 PTGER2P43116 358 aa17.18■□□□□ 0.34
CSRP1-213ENST00000530120 C1QTNF8P60827 252 aa17.18■□□□□ 0.34
CSRP1-213ENST00000530120 L3MBTL2Q969R5 705 aa17.18■□□□□ 0.34
CSRP1-213ENST00000530120 SYT17Q9BSW7 474 aa17.18■□□□□ 0.34
CSRP1-213ENST00000530120 USP6P35125 1406 aa17.17■□□□□ 0.34
CSRP1-213ENST00000530120 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
CSRP1-213ENST00000530120 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
CSRP1-213ENST00000530120 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
CSRP1-213ENST00000530120 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
CSRP1-213ENST00000530120 TXNRD1Q16881 649 aa17.16■□□□□ 0.34
CSRP1-213ENST00000530120 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
CSRP1-213ENST00000530120 MTFR1LQ9H019 292 aa17.16■□□□□ 0.34
CSRP1-213ENST00000530120 NLRP6P59044 892 aa17.15■□□□□ 0.34
CSRP1-213ENST00000530120 SLC15A2Q16348 729 aa17.15■□□□□ 0.34
CSRP1-213ENST00000530120 PROM2Q8N271 834 aa17.15■□□□□ 0.34
CSRP1-213ENST00000530120 SLIT3O75094 1523 aa17.15■□□□□ 0.34
CSRP1-213ENST00000530120 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
CSRP1-213ENST00000530120 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.33
CSRP1-213ENST00000530120 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.33
CSRP1-213ENST00000530120 BCL9O00512 1426 aa17.13■□□□□ 0.33
CSRP1-213ENST00000530120 CSB-PGBD3P0DP91 1061 aa17.13■□□□□ 0.33
CSRP1-213ENST00000530120 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
CSRP1-213ENST00000530120 ARXQ96QS3 562 aa17.12■□□□□ 0.33
CSRP1-213ENST00000530120 COL18A1P39060 1754 aa17.12■□□□□ 0.33
CSRP1-213ENST00000530120 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
CSRP1-213ENST00000530120 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
CSRP1-213ENST00000530120 EXOC5O00471 708 aa17.1■□□□□ 0.33
CSRP1-213ENST00000530120 GPR162Q16538 588 aa17.1■□□□□ 0.33
CSRP1-213ENST00000530120 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
CSRP1-213ENST00000530120 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
CSRP1-213ENST00000530120 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
CSRP1-213ENST00000530120 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
CSRP1-213ENST00000530120 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
CSRP1-213ENST00000530120 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
CSRP1-213ENST00000530120 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
CSRP1-213ENST00000530120 ABCC6O95255 1503 aa17.08■□□□□ 0.32
CSRP1-213ENST00000530120 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 SGIP1Q9BQI5 828 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
CSRP1-213ENST00000530120 SOX12O15370 315 aa17.06■□□□□ 0.32
CSRP1-213ENST00000530120 TNS2Q63HR2 1409 aa17.05■□□□□ 0.32
CSRP1-213ENST00000530120 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
CSRP1-213ENST00000530120 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
CSRP1-213ENST00000530120 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
CSRP1-213ENST00000530120 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
CSRP1-213ENST00000530120 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
CSRP1-213ENST00000530120 BTAF1O14981 1849 aa17.03■□□□□ 0.32
CSRP1-213ENST00000530120 ACSBG1Q96GR2 724 aa17.03■□□□□ 0.32
CSRP1-213ENST00000530120 MON2Q7Z3U7 1717 aa17.03■□□□□ 0.32
CSRP1-213ENST00000530120 USP54Q70EL1 1684 aa17.03■□□□□ 0.32
CSRP1-213ENST00000530120 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
CSRP1-213ENST00000530120 POLD1P28340 1107 aa17.02■□□□□ 0.32
CSRP1-213ENST00000530120 ARHGEF25Q86VW2 580 aa17.02■□□□□ 0.32
CSRP1-213ENST00000530120 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.31
CSRP1-213ENST00000530120 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
CSRP1-213ENST00000530120 NFAT5O94916 1531 aa17.01■□□□□ 0.31
CSRP1-213ENST00000530120 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
CSRP1-213ENST00000530120 CEP350Q5VT06 3117 aa17■□□□□ 0.31
CSRP1-213ENST00000530120 CARD11Q9BXL7 1154 aa17■□□□□ 0.31
CSRP1-213ENST00000530120 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
CSRP1-213ENST00000530120 ZNF827Q17R98 1081 aa16.98■□□□□ 0.31
CSRP1-213ENST00000530120 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
CSRP1-213ENST00000530120 USP31Q70CQ4 1352 aa16.98■□□□□ 0.31
CSRP1-213ENST00000530120 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
CSRP1-213ENST00000530120 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
CSRP1-213ENST00000530120 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.31
CSRP1-213ENST00000530120 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
CSRP1-213ENST00000530120 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.3
CSRP1-213ENST00000530120 CD163L1Q9NR16 1453 aa16.95■□□□□ 0.3
CSRP1-213ENST00000530120 IL2RBP14784 551 aa16.95■□□□□ 0.3
CSRP1-213ENST00000530120 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
CSRP1-213ENST00000530120 LTN1O94822 1766 aa16.94■□□□□ 0.3
CSRP1-213ENST00000530120 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
CSRP1-213ENST00000530120 GRIN3BO60391 1043 aa16.93■□□□□ 0.3
CSRP1-213ENST00000530120 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
CSRP1-213ENST00000530120 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
CSRP1-213ENST00000530120 TFCP2L1Q9NZI6 479 aa16.93■□□□□ 0.3
CSRP1-213ENST00000530120 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
CSRP1-213ENST00000530120 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
CSRP1-213ENST00000530120 ERBB3P21860 1342 aa16.92■□□□□ 0.3
CSRP1-213ENST00000530120 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
CSRP1-213ENST00000530120 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
CSRP1-213ENST00000530120 PNPLA7Q6ZV29 1317 aa16.9■□□□□ 0.3
CSRP1-213ENST00000530120 A0A1W2PP64 1363 aa16.89■□□□□ 0.3
CSRP1-213ENST00000530120 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
CSRP1-213ENST00000530120 MSH5O43196 834 aa16.88■□□□□ 0.29
CSRP1-213ENST00000530120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.88■□□□□ 0.29
CSRP1-213ENST00000530120 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms