RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 KDM4AO75164 1064 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 NUCB1Q02818 461 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 ABCA5Q8WWZ7 1642 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 CCDC30Q5VVM6 783 aa12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 CWC27Q6UX04 472 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-214ENST00000529689 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 SRGAP3O43295 1099 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 ANXA1P04083 346 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 GAS2L2Q8NHY3 880 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 POLKQ9UBT6 870 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 PLCH2O75038 1416 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 CEBPZQ03701 1054 aaKnown RBP12□□□□□ -0.49
CCDC90B-214ENST00000529689 G3BP1Q13283 466 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC90B-214ENST00000529689 ALDH1L2Q3SY69 923 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 BMP2KLQ5H9B9 411 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 FAM184AQ8NB25 1140 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 SPC24Q8NBT2 197 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 BICD2Q8TD16 824 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 ZBTB40Q9NUA8 1239 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 STK3Q13188 491 aa12□□□□□ -0.49
CCDC90B-214ENST00000529689 HDAC1Q13547 482 aaPredicted RBP12□□□□□ -0.49
CCDC90B-214ENST00000529689 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
CCDC90B-214ENST00000529689 CD109Q6YHK3 1445 aa11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 POLR3AO14802 1390 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 FERMT3Q86UX7 667 aa11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 KDM5BQ9UGL1 1544 aa11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 SF3A1Q15459 793 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 TAF7LQ5H9L4 462 aa11.99□□□□□ -0.49
CCDC90B-214ENST00000529689 IFT57Q9NWB7 429 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 VAMP4O75379 141 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 BAG4O95429 457 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 CEBPAP49715 358 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 RUFY2Q8WXA3 655 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 PIK3C2GO75747 1445 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 RRAGDQ9NQL2 400 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 TOMM22Q9NS69 142 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 ATP6V1DQ9Y5K8 247 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 ADGRL2O95490 1459 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 GCC2Q8IWJ2 1684 aa11.98□□□□□ -0.49
CCDC90B-214ENST00000529689 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 FOXO3O43524 673 aa11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 SDSP20132 328 aa11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 SMC5Q8IY18 1101 aa11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 BLMP54132 1417 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-214ENST00000529689 WASLO00401 505 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 NEXNQ0ZGT2 675 aa11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 LRRFIP2Q9Y608 721 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 ZGPATQ8N5A5 531 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
CCDC90B-214ENST00000529689 BECN2A8MW95 431 aa11.96□□□□□ -0.5
CCDC90B-214ENST00000529689 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.5
CCDC90B-214ENST00000529689 SRCIN1Q9C0H9 1055 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 CSPP1Q1MSJ5 1256 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 ESCO1Q5FWF5 840 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 CREBRFQ8IUR6 639 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 NUP160Q12769 1436 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 A0A1W2PP64 1363 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 PPFIA3O75145 1194 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 MYL6BP14649 208 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 KDM5CP41229 1560 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 ZNF521Q96K83 1311 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 MX1P20591 662 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 CHAMP1Q96JM3 812 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 DNAJC2Q99543 621 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 TSPY26PQ9H489 355 aa11.95□□□□□ -0.5
CCDC90B-214ENST00000529689 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 MBD5Q9P267 1494 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 ANKRD36BQ8N2N9 1353 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 MBD3O95983 291 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 NRDCO43847 1150 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 CWC22Q9HCG8 908 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-214ENST00000529689 TAF7Q15545 349 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 TTC22Q5TAA0 569 aa11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
CCDC90B-214ENST00000529689 TTC5Q8N0Z6 440 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms