RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 CAMTA1Q9Y6Y1 1673 aa15.5■□□□□ 0.07
CHD7-209ENST00000529472 ABCC6O95255 1503 aa15.49■□□□□ 0.07
CHD7-209ENST00000529472 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
CHD7-209ENST00000529472 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
CHD7-209ENST00000529472 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
CHD7-209ENST00000529472 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
CHD7-209ENST00000529472 BCL9LQ86UU0 1499 aa15.48■□□□□ 0.07
CHD7-209ENST00000529472 HOXC9P31274 260 aa15.48■□□□□ 0.07
CHD7-209ENST00000529472 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
CHD7-209ENST00000529472 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
CHD7-209ENST00000529472 FLT4P35916 1363 aa15.48■□□□□ 0.07
CHD7-209ENST00000529472 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
CHD7-209ENST00000529472 IP6K1Q92551 441 aa15.47■□□□□ 0.07
CHD7-209ENST00000529472 PARD3Q8TEW0 1356 aa15.47■□□□□ 0.07
CHD7-209ENST00000529472 SMG6Q86US8 1419 aaKnown RBP15.46■□□□□ 0.07
CHD7-209ENST00000529472 EVA1CP58658 441 aa15.46■□□□□ 0.07
CHD7-209ENST00000529472 UNC5CLQ8IV45 518 aa15.46■□□□□ 0.07
CHD7-209ENST00000529472 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
CHD7-209ENST00000529472 ZNF772Q68DY9 489 aaPredicted RBP15.45■□□□□ 0.06
CHD7-209ENST00000529472 LTV1Q96GA3 475 aaPredicted RBP15.45■□□□□ 0.06
CHD7-209ENST00000529472 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
CHD7-209ENST00000529472 HSP90AB2PQ58FF8 381 aa15.44■□□□□ 0.06
CHD7-209ENST00000529472 RGS17Q9UGC6 210 aaPredicted RBP15.44■□□□□ 0.06
CHD7-209ENST00000529472 CCDC9Q9Y3X0 531 aaKnown RBP15.44■□□□□ 0.06
CHD7-209ENST00000529472 CDK12Q9NYV4 1490 aaPredicted RBP15.44■□□□□ 0.06
CHD7-209ENST00000529472 ATRNO75882 1429 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 MTHFSP49914 203 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 RALBP1Q15311 655 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
CHD7-209ENST00000529472 ANKRD24Q8TF21 1146 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 ERBB3P21860 1342 aa15.43■□□□□ 0.06
CHD7-209ENST00000529472 INSRP06213 1382 aa15.42■□□□□ 0.06
CHD7-209ENST00000529472 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
CHD7-209ENST00000529472 QTRT2Q9H974 415 aaKnown RBP15.42■□□□□ 0.06
CHD7-209ENST00000529472 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
CHD7-209ENST00000529472 WDR17Q8IZU2 1322 aa15.42■□□□□ 0.06
CHD7-209ENST00000529472 VPS72Q15906 364 aa15.41■□□□□ 0.06
CHD7-209ENST00000529472 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
CHD7-209ENST00000529472 RGPD2P0DJD1 1756 aa15.41■□□□□ 0.06
CHD7-209ENST00000529472 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
CHD7-209ENST00000529472 ANP32CO43423 234 aa15.4■□□□□ 0.06
CHD7-209ENST00000529472 POTEAQ6S8J7 498 aa15.4■□□□□ 0.06
CHD7-209ENST00000529472 TOM1L2Q6ZVM7 507 aa15.4■□□□□ 0.06
CHD7-209ENST00000529472 CRB1P82279 1406 aa15.4■□□□□ 0.06
CHD7-209ENST00000529472 NLRP2Q9NX02 1062 aa15.39■□□□□ 0.05
CHD7-209ENST00000529472 GLI3P10071 1580 aa15.39■□□□□ 0.05
CHD7-209ENST00000529472 SPATA31A5Q5VU36 1347 aa15.39■□□□□ 0.05
CHD7-209ENST00000529472 SPATA31A7Q8IWB4 1347 aa15.39■□□□□ 0.05
CHD7-209ENST00000529472 MYBBP1AQ9BQG0 1328 aaKnown RBP15.39■□□□□ 0.05
CHD7-209ENST00000529472 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
CHD7-209ENST00000529472 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
CHD7-209ENST00000529472 SPATA31A1Q5TZJ5 1347 aa15.38■□□□□ 0.05
CHD7-209ENST00000529472 CFAP53Q96M91 514 aa15.37■□□□□ 0.05
CHD7-209ENST00000529472 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
CHD7-209ENST00000529472 EP400Q96L91 3159 aa15.36■□□□□ 0.05
CHD7-209ENST00000529472 DIEXFQ68CQ4 756 aaKnown RBP15.36■□□□□ 0.05
CHD7-209ENST00000529472 USHBP1Q8N6Y0 703 aa15.36■□□□□ 0.05
CHD7-209ENST00000529472 CARD10Q9BWT7 1032 aa15.36■□□□□ 0.05
CHD7-209ENST00000529472 RXRBP28702 533 aa15.35■□□□□ 0.05
CHD7-209ENST00000529472 RBM6P78332 1123 aaKnown RBP15.35■□□□□ 0.05
CHD7-209ENST00000529472 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
CHD7-209ENST00000529472 NBPF6Q5VWK0 638 aa15.35■□□□□ 0.05
CHD7-209ENST00000529472 NBPF4Q96M43 638 aa15.35■□□□□ 0.05
CHD7-209ENST00000529472 WNK3Q9BYP7 1800 aa15.34■□□□□ 0.05
CHD7-209ENST00000529472 A0A0G2JS52 829 aa15.34■□□□□ 0.05
CHD7-209ENST00000529472 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
CHD7-209ENST00000529472 MYT1Q01538 1121 aa15.34■□□□□ 0.05
CHD7-209ENST00000529472 TCP11L2Q8N4U5 519 aa15.34■□□□□ 0.05
CHD7-209ENST00000529472 IL13P35225 146 aa15.33■□□□□ 0.04
CHD7-209ENST00000529472 RGPD1P0DJD0 1748 aa15.32■□□□□ 0.04
CHD7-209ENST00000529472 EYA1Q99502 592 aa15.32■□□□□ 0.04
CHD7-209ENST00000529472 THRAP3Q9Y2W1 955 aaKnown RBP15.32■□□□□ 0.04
CHD7-209ENST00000529472 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
CHD7-209ENST00000529472 IGSF1Q8N6C5 1336 aa15.31■□□□□ 0.04
CHD7-209ENST00000529472 RGS12O14924 1447 aa15.31■□□□□ 0.04
CHD7-209ENST00000529472 THSD7AQ9UPZ6 1657 aa15.31■□□□□ 0.04
CHD7-209ENST00000529472 BARGINQ6ZT62 677 aa15.3■□□□□ 0.04
CHD7-209ENST00000529472 MEGF6O75095 1541 aa15.29■□□□□ 0.04
CHD7-209ENST00000529472 NCAPD2Q15021 1401 aa15.29■□□□□ 0.04
CHD7-209ENST00000529472 AEBP1Q8IUX7 1158 aa15.29■□□□□ 0.04
CHD7-209ENST00000529472 PARP4Q9UKK3 1724 aaKnown RBP15.29■□□□□ 0.04
CHD7-209ENST00000529472 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
CHD7-209ENST00000529472 IL2RBP14784 551 aa15.28■□□□□ 0.04
CHD7-209ENST00000529472 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
CHD7-209ENST00000529472 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
CHD7-209ENST00000529472 NUDCQ9Y266 331 aa15.28■□□□□ 0.04
CHD7-209ENST00000529472 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
CHD7-209ENST00000529472 BRWD3Q6RI45 1802 aa15.27■□□□□ 0.04
CHD7-209ENST00000529472 HMOX1P09601 288 aa15.27■□□□□ 0.04
CHD7-209ENST00000529472 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
CHD7-209ENST00000529472 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
CHD7-209ENST00000529472 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
CHD7-209ENST00000529472 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHD7-209ENST00000529472 CCDC184Q52MB2 194 aa15.26■□□□□ 0.03
CHD7-209ENST00000529472 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
CHD7-209ENST00000529472 OVOS2A0A0G2JMS6 1433 aa15.26■□□□□ 0.03
CHD7-209ENST00000529472 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
CHD7-209ENST00000529472 MRS2Q9HD23 443 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms