RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 KANK1Q14678 1352 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 UQCRHLA0A096LP55 91 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 UQCRHP07919 91 aa10.07□□□□□ -0.8
C11orf88-203ENST00000529167 COL22A1Q8NFW1 1626 aaPredicted RBP10.07□□□□□ -0.8
C11orf88-203ENST00000529167 TRPM2O94759 1503 aa10.06□□□□□ -0.8
C11orf88-203ENST00000529167 SLKQ9H2G2 1235 aaPredicted RBP10.06□□□□□ -0.8
C11orf88-203ENST00000529167 PTPN23Q9H3S7 1636 aa10.06□□□□□ -0.8
C11orf88-203ENST00000529167 KIF15Q9NS87 1388 aa10.06□□□□□ -0.8
C11orf88-203ENST00000529167 C8orf37Q96NL8 207 aa10.06□□□□□ -0.8
C11orf88-203ENST00000529167 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
C11orf88-203ENST00000529167 GZF1Q9H116 711 aaPredicted RBP10.06□□□□□ -0.8
C11orf88-203ENST00000529167 SPHKAPQ2M3C7 1700 aa10.06□□□□□ -0.8
C11orf88-203ENST00000529167 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
C11orf88-203ENST00000529167 UNC13BO14795 1591 aa10.05□□□□□ -0.8
C11orf88-203ENST00000529167 FNBP4Q8N3X1 1017 aaPredicted RBP10.05□□□□□ -0.8
C11orf88-203ENST00000529167 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
C11orf88-203ENST00000529167 CCDC144AA2RUR9 1427 aa10.05□□□□□ -0.8
C11orf88-203ENST00000529167 HDGFP51858 240 aaKnown RBP10.05□□□□□ -0.8
C11orf88-203ENST00000529167 R3HCC1Q9Y3T6 440 aaKnown RBP10.05□□□□□ -0.8
C11orf88-203ENST00000529167 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
C11orf88-203ENST00000529167 E9PSI1 815 aa10.04□□□□□ -0.8
C11orf88-203ENST00000529167 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
C11orf88-203ENST00000529167 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
C11orf88-203ENST00000529167 BLMP54132 1417 aaPredicted RBP10.04□□□□□ -0.8
C11orf88-203ENST00000529167 INSRP06213 1382 aa10.04□□□□□ -0.8
C11orf88-203ENST00000529167 PTPRUQ92729 1446 aa10.04□□□□□ -0.8
C11orf88-203ENST00000529167 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
C11orf88-203ENST00000529167 GAS2L3Q86XJ1 694 aa10.03□□□□□ -0.8
C11orf88-203ENST00000529167 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
C11orf88-203ENST00000529167 IRX3P78415 501 aaPredicted RBP10.03□□□□□ -0.8
C11orf88-203ENST00000529167 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
C11orf88-203ENST00000529167 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.03□□□□□ -0.8
C11orf88-203ENST00000529167 ROCK2O75116 1388 aaKnown RBP10.02□□□□□ -0.8
C11orf88-203ENST00000529167 CERS3Q8IU89 383 aa10.02□□□□□ -0.81
C11orf88-203ENST00000529167 MARF1Q9Y4F3 1742 aaKnown RBP10.02□□□□□ -0.81
C11orf88-203ENST00000529167 BCL9LQ86UU0 1499 aa10.02□□□□□ -0.81
C11orf88-203ENST00000529167 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
C11orf88-203ENST00000529167 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
C11orf88-203ENST00000529167 CHMP5Q9NZZ3 219 aa10.02□□□□□ -0.81
C11orf88-203ENST00000529167 SASS6Q6UVJ0 657 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 IBTKQ9P2D0 1353 aaPredicted RBP10.01□□□□□ -0.81
C11orf88-203ENST00000529167 ABCC5O15440 1437 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 USP21Q9UK80 565 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 SRCAPQ6ZRS2 3230 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 MCM5P33992 734 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 MMP14P50281 582 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
C11orf88-203ENST00000529167 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.01□□□□□ -0.81
C11orf88-203ENST00000529167 PLIN1O60240 522 aa10□□□□□ -0.81
C11orf88-203ENST00000529167 FAM193AP78312 1265 aa10□□□□□ -0.81
C11orf88-203ENST00000529167 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
C11orf88-203ENST00000529167 HDAC5Q9UQL6 1122 aa10□□□□□ -0.81
C11orf88-203ENST00000529167 NRXN3Q9Y4C0 1643 aa10□□□□□ -0.81
C11orf88-203ENST00000529167 NGEFQ8N5V2 710 aa10□□□□□ -0.81
C11orf88-203ENST00000529167 ADGRL3Q9HAR2 1447 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 PATL2C9JE40 543 aaKnown RBP9.99□□□□□ -0.81
C11orf88-203ENST00000529167 PSEN1P49768 467 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 MYOM2P54296 1465 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 SOX12O15370 315 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 SKOR2Q2VWA4 1001 aaPredicted RBP9.99□□□□□ -0.81
C11orf88-203ENST00000529167 TBC1D32Q96NH3 1257 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 NALCNQ8IZF0 1738 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 NAIPQ13075 1403 aa9.99□□□□□ -0.81
C11orf88-203ENST00000529167 SOS2Q07890 1332 aaPredicted RBP9.99□□□□□ -0.81
C11orf88-203ENST00000529167 SEC24BO95487 1268 aa9.98□□□□□ -0.81
C11orf88-203ENST00000529167 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
C11orf88-203ENST00000529167 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
C11orf88-203ENST00000529167 AMOTL2Q9Y2J4 779 aa9.98□□□□□ -0.81
C11orf88-203ENST00000529167 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
C11orf88-203ENST00000529167 PTMSP20962 102 aa9.98□□□□□ -0.81
C11orf88-203ENST00000529167 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
C11orf88-203ENST00000529167 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
C11orf88-203ENST00000529167 GLI3P10071 1580 aa9.97□□□□□ -0.81
C11orf88-203ENST00000529167 DDIT3P35638 169 aa9.97□□□□□ -0.81
C11orf88-203ENST00000529167 PDLIM2Q96JY6 352 aa9.97□□□□□ -0.81
C11orf88-203ENST00000529167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.97□□□□□ -0.81
C11orf88-203ENST00000529167 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
C11orf88-203ENST00000529167 C20orf194Q5TEA3 1177 aa9.97□□□□□ -0.81
C11orf88-203ENST00000529167 DNAJC2Q99543 621 aaKnown RBP9.97□□□□□ -0.81
C11orf88-203ENST00000529167 IQGAP3Q86VI3 1631 aa9.96□□□□□ -0.81
C11orf88-203ENST00000529167 C1orf167Q5SNV9 1468 aa9.96□□□□□ -0.81
C11orf88-203ENST00000529167 NASPP49321 788 aaPredicted RBP9.96□□□□□ -0.81
C11orf88-203ENST00000529167 IRX5P78411 483 aaPredicted RBP9.96□□□□□ -0.81
C11orf88-203ENST00000529167 DNTTIP2Q5QJE6 756 aaKnown RBP9.96□□□□□ -0.81
C11orf88-203ENST00000529167 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.81
C11orf88-203ENST00000529167 DAPK1P53355 1430 aa9.96□□□□□ -0.81
C11orf88-203ENST00000529167 ADAMTS2O95450 1211 aa9.96□□□□□ -0.82
C11orf88-203ENST00000529167 MYRIPQ8NFW9 859 aa9.96□□□□□ -0.82
C11orf88-203ENST00000529167 CHMP4CQ96CF2 233 aa9.96□□□□□ -0.82
C11orf88-203ENST00000529167 MYBBP1AQ9BQG0 1328 aaKnown RBP9.95□□□□□ -0.82
C11orf88-203ENST00000529167 ZNF592Q92610 1267 aa9.95□□□□□ -0.82
C11orf88-203ENST00000529167 RRP7BPQ9NSQ0 103 aa9.95□□□□□ -0.82
C11orf88-203ENST00000529167 MAPK8IP3Q9UPT6 1336 aa9.95□□□□□ -0.82
C11orf88-203ENST00000529167 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
C11orf88-203ENST00000529167 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
C11orf88-203ENST00000529167 ZKSCAN5Q9Y2L8 839 aa9.95□□□□□ -0.82
C11orf88-203ENST00000529167 ADGRL2O95490 1459 aa9.95□□□□□ -0.82
C11orf88-203ENST00000529167 CBX1P83916 185 aa9.94□□□□□ -0.82
C11orf88-203ENST00000529167 ATP2B3Q16720 1220 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms