RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 ZRANB1Q9UGI0 708 aa11.34□□□□□ -0.59
RDX-205ENST00000528556 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
RDX-205ENST00000528556 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
RDX-205ENST00000528556 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
RDX-205ENST00000528556 PPP2R1AP30153 589 aa11.32□□□□□ -0.6
RDX-205ENST00000528556 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
RDX-205ENST00000528556 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
RDX-205ENST00000528556 ARHGEF10O15013 1369 aa11.31□□□□□ -0.6
RDX-205ENST00000528556 KCNH5Q8NCM2 988 aa11.31□□□□□ -0.6
RDX-205ENST00000528556 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
RDX-205ENST00000528556 NRKQ7Z2Y5 1582 aa11.3□□□□□ -0.6
RDX-205ENST00000528556 TNS3Q68CZ2 1445 aa11.3□□□□□ -0.6
RDX-205ENST00000528556 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
RDX-205ENST00000528556 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
RDX-205ENST00000528556 AMPHP49418 695 aa11.29□□□□□ -0.6
RDX-205ENST00000528556 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
RDX-205ENST00000528556 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
RDX-205ENST00000528556 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
RDX-205ENST00000528556 PXDNQ92626 1479 aa11.28□□□□□ -0.6
RDX-205ENST00000528556 MTHFSP49914 203 aa11.28□□□□□ -0.6
RDX-205ENST00000528556 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
RDX-205ENST00000528556 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
RDX-205ENST00000528556 PHLPP1O60346 1717 aa11.27□□□□□ -0.61
RDX-205ENST00000528556 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.61
RDX-205ENST00000528556 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
RDX-205ENST00000528556 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
RDX-205ENST00000528556 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
RDX-205ENST00000528556 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
RDX-205ENST00000528556 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
RDX-205ENST00000528556 GCP02774 474 aa11.26□□□□□ -0.61
RDX-205ENST00000528556 FBLN1P23142 703 aa11.26□□□□□ -0.61
RDX-205ENST00000528556 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
RDX-205ENST00000528556 NHSL1Q5SYE7 1610 aa11.26□□□□□ -0.61
RDX-205ENST00000528556 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
RDX-205ENST00000528556 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
RDX-205ENST00000528556 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
RDX-205ENST00000528556 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
RDX-205ENST00000528556 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
RDX-205ENST00000528556 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
RDX-205ENST00000528556 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
RDX-205ENST00000528556 NUTM2BA6NNL0 878 aaPredicted RBP11.24□□□□□ -0.61
RDX-205ENST00000528556 NUTM2EB1AL46 878 aaPredicted RBP11.24□□□□□ -0.61
RDX-205ENST00000528556 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
RDX-205ENST00000528556 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
RDX-205ENST00000528556 NUTM2AQ8IVF1 878 aaPredicted RBP11.24□□□□□ -0.61
RDX-205ENST00000528556 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
RDX-205ENST00000528556 POLKQ9UBT6 870 aa11.24□□□□□ -0.61
RDX-205ENST00000528556 AATKQ6ZMQ8 1374 aa11.24□□□□□ -0.61
RDX-205ENST00000528556 NEFMP07197 916 aa11.23□□□□□ -0.61
RDX-205ENST00000528556 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
RDX-205ENST00000528556 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
RDX-205ENST00000528556 LTV1Q96GA3 475 aaPredicted RBP11.23□□□□□ -0.61
RDX-205ENST00000528556 MAP3K19Q56UN5 1328 aa11.23□□□□□ -0.61
RDX-205ENST00000528556 ALS2Q96Q42 1657 aa11.23□□□□□ -0.61
RDX-205ENST00000528556 USP19O94966 1318 aa11.22□□□□□ -0.61
RDX-205ENST00000528556 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
RDX-205ENST00000528556 PRDM11Q9NQV5 511 aa11.22□□□□□ -0.61
RDX-205ENST00000528556 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.61
RDX-205ENST00000528556 FLT4P35916 1363 aa11.21□□□□□ -0.61
RDX-205ENST00000528556 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
RDX-205ENST00000528556 CLCN6P51797 869 aa11.21□□□□□ -0.61
RDX-205ENST00000528556 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
RDX-205ENST00000528556 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
RDX-205ENST00000528556 ADAMTS2O95450 1211 aa11.2□□□□□ -0.62
RDX-205ENST00000528556 HOXC9P31274 260 aa11.2□□□□□ -0.62
RDX-205ENST00000528556 HSPA1LP34931 641 aa11.2□□□□□ -0.62
RDX-205ENST00000528556 EVA1CP58658 441 aa11.2□□□□□ -0.62
RDX-205ENST00000528556 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
RDX-205ENST00000528556 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
RDX-205ENST00000528556 SLIT3O75094 1523 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 JCADQ9P266 1359 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 HSP90AB2PQ58FF8 381 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 IP6K1Q92551 441 aa11.19□□□□□ -0.62
RDX-205ENST00000528556 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
RDX-205ENST00000528556 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
RDX-205ENST00000528556 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
RDX-205ENST00000528556 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
RDX-205ENST00000528556 KIAA0232Q92628 1395 aa11.18□□□□□ -0.62
RDX-205ENST00000528556 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
RDX-205ENST00000528556 COL16A1Q07092 1604 aaPredicted RBP11.18□□□□□ -0.62
RDX-205ENST00000528556 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
RDX-205ENST00000528556 ARHGEF25Q86VW2 580 aa11.18□□□□□ -0.62
RDX-205ENST00000528556 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
RDX-205ENST00000528556 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
RDX-205ENST00000528556 MED1Q15648 1581 aaPredicted RBP11.18□□□□□ -0.62
RDX-205ENST00000528556 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
RDX-205ENST00000528556 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
RDX-205ENST00000528556 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
RDX-205ENST00000528556 LTN1O94822 1766 aa11.16□□□□□ -0.62
RDX-205ENST00000528556 NFAT5O94916 1531 aa11.16□□□□□ -0.62
RDX-205ENST00000528556 EIF4A2Q14240 407 aaKnown RBP11.16□□□□□ -0.62
RDX-205ENST00000528556 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
RDX-205ENST00000528556 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
RDX-205ENST00000528556 INSRP06213 1382 aa11.16□□□□□ -0.62
RDX-205ENST00000528556 MARF1Q9Y4F3 1742 aaKnown RBP11.15□□□□□ -0.62
RDX-205ENST00000528556 SPATA31A6Q5VVP1 1343 aa11.15□□□□□ -0.62
RDX-205ENST00000528556 HMOX1P09601 288 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms