RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 RGS12O14924 1447 aa16.76■□□□□ 0.27
SDHD-205ENST00000528048 USP31Q70CQ4 1352 aa16.76■□□□□ 0.27
SDHD-205ENST00000528048 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
SDHD-205ENST00000528048 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
SDHD-205ENST00000528048 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■□□□□ 8.8
SDHD-205ENST00000528048 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
SDHD-205ENST00000528048 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
SDHD-205ENST00000528048 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
SDHD-205ENST00000528048 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
SDHD-205ENST00000528048 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
SDHD-205ENST00000528048 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
SDHD-205ENST00000528048 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
SDHD-205ENST00000528048 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
SDHD-205ENST00000528048 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
SDHD-205ENST00000528048 FYB1O15117 783 aa16.71■□□□□ 0.27
SDHD-205ENST00000528048 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
SDHD-205ENST00000528048 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
SDHD-205ENST00000528048 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
SDHD-205ENST00000528048 PDE3BQ13370 1112 aa16.69■□□□□ 0.26
SDHD-205ENST00000528048 BARGINQ6ZT62 677 aa16.69■□□□□ 0.26
SDHD-205ENST00000528048 CCDC125Q86Z20 511 aa16.69■□□□□ 0.26
SDHD-205ENST00000528048 CARD14Q9BXL6 1004 aa16.69■□□□□ 0.26
SDHD-205ENST00000528048 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
SDHD-205ENST00000528048 AMPHP49418 695 aa16.68■□□□□ 0.26
SDHD-205ENST00000528048 SLIT3O75094 1523 aa16.67■□□□□ 0.26
SDHD-205ENST00000528048 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
SDHD-205ENST00000528048 PANK3Q9H999 370 aa16.67■□□□□ 0.26
SDHD-205ENST00000528048 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
SDHD-205ENST00000528048 WDR17Q8IZU2 1322 aa16.67■□□□□ 0.26
SDHD-205ENST00000528048 ZBTB22O15209 634 aa16.65■□□□□ 0.26
SDHD-205ENST00000528048 IP6K1Q92551 441 aa16.65■□□□□ 0.26
SDHD-205ENST00000528048 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
SDHD-205ENST00000528048 CARD10Q9BWT7 1032 aa16.65■□□□□ 0.26
SDHD-205ENST00000528048 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
SDHD-205ENST00000528048 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
SDHD-205ENST00000528048 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
SDHD-205ENST00000528048 CRB1P82279 1406 aa16.64■□□□□ 0.25
SDHD-205ENST00000528048 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
SDHD-205ENST00000528048 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
SDHD-205ENST00000528048 MARF1Q9Y4F3 1742 aaKnown RBP16.64■□□□□ 0.25
SDHD-205ENST00000528048 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
SDHD-205ENST00000528048 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
SDHD-205ENST00000528048 FBLN1P23142 703 aa16.63■□□□□ 0.25
SDHD-205ENST00000528048 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
SDHD-205ENST00000528048 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
SDHD-205ENST00000528048 GLI3P10071 1580 aa16.63■□□□□ 0.25
SDHD-205ENST00000528048 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
SDHD-205ENST00000528048 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
SDHD-205ENST00000528048 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
SDHD-205ENST00000528048 NWD2Q9ULI1 1742 aa16.62■□□□□ 0.25
SDHD-205ENST00000528048 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
SDHD-205ENST00000528048 PHRF1Q9P1Y6 1649 aaKnown RBP16.62■□□□□ 0.25
SDHD-205ENST00000528048 PIK3C2AO00443 1686 aa16.62■□□□□ 0.25
SDHD-205ENST00000528048 RRS1Q15050 365 aaKnown RBP16.61■□□□□ 0.25
SDHD-205ENST00000528048 DDB1Q16531 1140 aa16.61■□□□□ 0.25
SDHD-205ENST00000528048 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
SDHD-205ENST00000528048 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.61■□□□□ 0.25
SDHD-205ENST00000528048 PLCH1Q4KWH8 1693 aa16.6■□□□□ 0.25
SDHD-205ENST00000528048 EXOC5O00471 708 aa16.6■□□□□ 0.25
SDHD-205ENST00000528048 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
SDHD-205ENST00000528048 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
SDHD-205ENST00000528048 HOXC9P31274 260 aa16.59■□□□□ 0.25
SDHD-205ENST00000528048 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
SDHD-205ENST00000528048 ERBB3P21860 1342 aa16.59■□□□□ 0.25
SDHD-205ENST00000528048 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
SDHD-205ENST00000528048 AKAP12Q02952 1782 aa16.59■□□□□ 0.25
SDHD-205ENST00000528048 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
SDHD-205ENST00000528048 CRYBG1Q9Y4K1 1723 aa16.58■□□□□ 0.24
SDHD-205ENST00000528048 NFAT5O94916 1531 aa16.57■□□□□ 0.24
SDHD-205ENST00000528048 MON2Q7Z3U7 1717 aa16.56■□□□□ 0.24
SDHD-205ENST00000528048 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
SDHD-205ENST00000528048 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
SDHD-205ENST00000528048 MORC1Q86VD1 984 aa16.56■□□□□ 0.24
SDHD-205ENST00000528048 IL2RBP14784 551 aa16.55■□□□□ 0.24
SDHD-205ENST00000528048 BAG6P46379 1132 aa16.55■□□□□ 0.24
SDHD-205ENST00000528048 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
SDHD-205ENST00000528048 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
SDHD-205ENST00000528048 RTL1A6NKG5 1358 aa16.53■□□□□ 0.24
SDHD-205ENST00000528048 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
SDHD-205ENST00000528048 TRIM37O94972 964 aa16.53■□□□□ 0.24
SDHD-205ENST00000528048 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
SDHD-205ENST00000528048 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
SDHD-205ENST00000528048 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
SDHD-205ENST00000528048 NSD2O96028 1365 aa16.51■□□□□ 0.23
SDHD-205ENST00000528048 KIF24Q5T7B8 1368 aa16.51■□□□□ 0.23
SDHD-205ENST00000528048 ABCC6O95255 1503 aa16.51■□□□□ 0.23
SDHD-205ENST00000528048 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
SDHD-205ENST00000528048 INSRP06213 1382 aa16.51■□□□□ 0.23
SDHD-205ENST00000528048 FLT4P35916 1363 aa16.51■□□□□ 0.23
SDHD-205ENST00000528048 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
SDHD-205ENST00000528048 APBA3O96018 575 aa16.5■□□□□ 0.23
SDHD-205ENST00000528048 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
SDHD-205ENST00000528048 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
SDHD-205ENST00000528048 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
SDHD-205ENST00000528048 RAPGEF4Q8WZA2 1011 aa16.49■□□□□ 0.23
SDHD-205ENST00000528048 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
SDHD-205ENST00000528048 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
SDHD-205ENST00000528048 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
SDHD-205ENST00000528048 TATP17735 454 aaPredicted RBP16.47■□□□□ 0.23
SDHD-205ENST00000528048 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms