RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 PROM2Q8N271 834 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 TCP11L2Q8N4U5 519 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 ABTB2Q8N961 1025 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 CABP2Q9NPB3 220 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 OVOS2A0A0G2JMS6 1433 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 CRYBG1Q9Y4K1 1723 aa14.38□□□□□ -0.11
CAPN1-210ENST00000527699 SBF2Q86WG5 1849 aa14.37□□□□□ -0.11
CAPN1-210ENST00000527699 YBX3P16989 372 aaKnown RBP eCLIP14.37□□□□□ -0.113e-6■□□□□ 8.1
CAPN1-210ENST00000527699 POLD1P28340 1107 aa14.37□□□□□ -0.11
CAPN1-210ENST00000527699 SRPK2P78362 688 aaKnown RBP14.37□□□□□ -0.11
CAPN1-210ENST00000527699 TXNRD1Q16881 649 aa14.37□□□□□ -0.11
CAPN1-210ENST00000527699 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
CAPN1-210ENST00000527699 LARP1Q6PKG0 1096 aaKnown RBP14.36□□□□□ -0.11
CAPN1-210ENST00000527699 PTF1AQ7RTS3 328 aa14.36□□□□□ -0.11
CAPN1-210ENST00000527699 PHRF1Q9P1Y6 1649 aaKnown RBP14.35□□□□□ -0.11
CAPN1-210ENST00000527699 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
CAPN1-210ENST00000527699 SSH2Q76I76 1423 aa14.33□□□□□ -0.11
CAPN1-210ENST00000527699 ITSN1Q15811 1721 aa14.33□□□□□ -0.12
CAPN1-210ENST00000527699 STAC3Q96MF2 364 aa14.33□□□□□ -0.12
CAPN1-210ENST00000527699 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
CAPN1-210ENST00000527699 PPIP5K1Q6PFW1 1433 aa14.32□□□□□ -0.12
CAPN1-210ENST00000527699 PLEKHG3A1L390 1219 aa14.31□□□□□ -0.12
CAPN1-210ENST00000527699 KIF3CO14782 793 aa14.31□□□□□ -0.12
CAPN1-210ENST00000527699 SOX12O15370 315 aa14.31□□□□□ -0.12
CAPN1-210ENST00000527699 CABP1Q9NZU7 370 aa14.31□□□□□ -0.12
CAPN1-210ENST00000527699 WDR90Q96KV7 1748 aa14.31□□□□□ -0.12
CAPN1-210ENST00000527699 PARP4Q9UKK3 1724 aaKnown RBP14.31□□□□□ -0.12
CAPN1-210ENST00000527699 POLR3AO14802 1390 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-210ENST00000527699 AATKQ6ZMQ8 1374 aa14.31□□□□□ -0.12
CAPN1-210ENST00000527699 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
CAPN1-210ENST00000527699 GCP02774 474 aa14.3□□□□□ -0.12
CAPN1-210ENST00000527699 HTRA3P83110 453 aa14.3□□□□□ -0.12
CAPN1-210ENST00000527699 CENPJQ9HC77 1338 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-210ENST00000527699 PEAK1Q9H792 1746 aa14.29□□□□□ -0.12
CAPN1-210ENST00000527699 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
CAPN1-210ENST00000527699 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
CAPN1-210ENST00000527699 SIN3AQ96ST3 1273 aa14.29□□□□□ -0.12
CAPN1-210ENST00000527699 THRAP3Q9Y2W1 955 aaKnown RBP14.29□□□□□ -0.12
CAPN1-210ENST00000527699 ADCY9O60503 1353 aa14.28□□□□□ -0.12
CAPN1-210ENST00000527699 NLRP6P59044 892 aa14.28□□□□□ -0.12
CAPN1-210ENST00000527699 DDB1Q16531 1140 aa14.28□□□□□ -0.12
CAPN1-210ENST00000527699 JMYQ8N9B5 988 aa14.28□□□□□ -0.12
CAPN1-210ENST00000527699 USP19O94966 1318 aa14.27□□□□□ -0.12
CAPN1-210ENST00000527699 L3MBTL2Q969R5 705 aa14.26□□□□□ -0.13
CAPN1-210ENST00000527699 TOMM70O94826 608 aa14.25□□□□□ -0.13
CAPN1-210ENST00000527699 QRICH2Q9H0J4 1663 aa14.24□□□□□ -0.13
CAPN1-210ENST00000527699 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
CAPN1-210ENST00000527699 KIAA1210Q9ULL0 1709 aa14.24□□□□□ -0.13
CAPN1-210ENST00000527699 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
CAPN1-210ENST00000527699 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
CAPN1-210ENST00000527699 AXIN2Q9Y2T1 843 aa14.23□□□□□ -0.13
CAPN1-210ENST00000527699 COL5A2P05997 1499 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-210ENST00000527699 CPDO75976 1380 aa14.22□□□□□ -0.13
CAPN1-210ENST00000527699 AKAP12Q02952 1782 aa14.22□□□□□ -0.13
CAPN1-210ENST00000527699 HSPA1AP0DMV8 641 aaKnown RBP14.22□□□□□ -0.13
CAPN1-210ENST00000527699 HSPA1BP0DMV9 641 aaKnown RBP14.22□□□□□ -0.13
CAPN1-210ENST00000527699 ZNF827Q17R98 1081 aa14.22□□□□□ -0.13
CAPN1-210ENST00000527699 SLC16A10Q8TF71 515 aa14.22□□□□□ -0.13
CAPN1-210ENST00000527699 USP6P35125 1406 aa14.22□□□□□ -0.13
CAPN1-210ENST00000527699 CSB-PGBD3P0DP91 1061 aa14.21□□□□□ -0.13
CAPN1-210ENST00000527699 FAM161AQ3B820 660 aa14.21□□□□□ -0.13
CAPN1-210ENST00000527699 MARCH10Q8NA82 808 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-210ENST00000527699 CRB1P82279 1406 aa14.2□□□□□ -0.14
CAPN1-210ENST00000527699 EVC2Q86UK5 1308 aa14.19□□□□□ -0.14
CAPN1-210ENST00000527699 PCNTO95613 3336 aa14.19□□□□□ -0.14
CAPN1-210ENST00000527699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
CAPN1-210ENST00000527699 TTC21BQ7Z4L5 1316 aa14.18□□□□□ -0.14
CAPN1-210ENST00000527699 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-210ENST00000527699 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
CAPN1-210ENST00000527699 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
CAPN1-210ENST00000527699 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
CAPN1-210ENST00000527699 TNS2Q63HR2 1409 aa14.16□□□□□ -0.14
CAPN1-210ENST00000527699 PAPPAQ13219 1627 aa14.16□□□□□ -0.14
CAPN1-210ENST00000527699 MSH5O43196 834 aa14.16□□□□□ -0.14
CAPN1-210ENST00000527699 SLIT3O75094 1523 aa14.15□□□□□ -0.14
CAPN1-210ENST00000527699 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
CAPN1-210ENST00000527699 TFCP2L1Q9NZI6 479 aa14.15□□□□□ -0.14
CAPN1-210ENST00000527699 WDR17Q8IZU2 1322 aa14.15□□□□□ -0.15
CAPN1-210ENST00000527699 ARHGEF25Q86VW2 580 aa14.14□□□□□ -0.15
CAPN1-210ENST00000527699 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
CAPN1-210ENST00000527699 TRPM1Q7Z4N2 1603 aa14.14□□□□□ -0.15
CAPN1-210ENST00000527699 CPSF1Q10570 1443 aaKnown RBP14.14□□□□□ -0.15
CAPN1-210ENST00000527699 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
CAPN1-210ENST00000527699 KTN1Q86UP2 1357 aaKnown RBP14.13□□□□□ -0.15
CAPN1-210ENST00000527699 NME9Q86XW9 330 aa14.13□□□□□ -0.15
CAPN1-210ENST00000527699 NMRK2Q9NPI5 230 aa14.13□□□□□ -0.15
CAPN1-210ENST00000527699 COL18A1P39060 1754 aa14.13□□□□□ -0.15
CAPN1-210ENST00000527699 PNPLA7Q6ZV29 1317 aa14.13□□□□□ -0.15
CAPN1-210ENST00000527699 COL24A1Q17RW2 1714 aa14.12□□□□□ -0.15
CAPN1-210ENST00000527699 BRD4O60885 1362 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-210ENST00000527699 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
CAPN1-210ENST00000527699 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-210ENST00000527699 EXOC5O00471 708 aa14.11□□□□□ -0.15
CAPN1-210ENST00000527699 BCL9O00512 1426 aa14.11□□□□□ -0.15
CAPN1-210ENST00000527699 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
CAPN1-210ENST00000527699 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
CAPN1-210ENST00000527699 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
CAPN1-210ENST00000527699 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 271.7 ms