RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 KCNA6P17658 529 aa8.77□□□□□ -1.01
LINC01001-202ENST00000527683 APLP1P51693 650 aa8.77□□□□□ -1.01
LINC01001-202ENST00000527683 TMEM134Q9H6X4 195 aa8.77□□□□□ -1.01
LINC01001-202ENST00000527683 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
LINC01001-202ENST00000527683 POTEAQ6S8J7 498 aa8.76□□□□□ -1.01
LINC01001-202ENST00000527683 MED1Q15648 1581 aaPredicted RBP8.76□□□□□ -1.01
LINC01001-202ENST00000527683 ADGBQ8N7X0 1667 aa8.75□□□□□ -1.01
LINC01001-202ENST00000527683 FAM135BQ49AJ0 1406 aa8.75□□□□□ -1.01
LINC01001-202ENST00000527683 PPP4CP60510 307 aa8.75□□□□□ -1.01
LINC01001-202ENST00000527683 RBM46Q8TBY0 533 aaKnown RBP8.75□□□□□ -1.01
LINC01001-202ENST00000527683 SLC26A8Q96RN1 970 aa8.75□□□□□ -1.01
LINC01001-202ENST00000527683 ERVK-7P63135 1459 aa8.75□□□□□ -1.01
LINC01001-202ENST00000527683 SLC10A3P09131 477 aa8.74□□□□□ -1.01
LINC01001-202ENST00000527683 HRCP23327 699 aa8.74□□□□□ -1.01
LINC01001-202ENST00000527683 DNAJB2P25686 324 aa8.74□□□□□ -1.01
LINC01001-202ENST00000527683 LMOD2Q6P5Q4 547 aa8.74□□□□□ -1.01
LINC01001-202ENST00000527683 PROSER2Q86WR7 435 aaPredicted RBP8.74□□□□□ -1.01
LINC01001-202ENST00000527683 ABCC3O15438 1527 aa8.74□□□□□ -1.01
LINC01001-202ENST00000527683 TMEM2Q9UHN6 1383 aa8.73□□□□□ -1.01
LINC01001-202ENST00000527683 ARHGAP31Q2M1Z3 1444 aa8.73□□□□□ -1.01
LINC01001-202ENST00000527683 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
LINC01001-202ENST00000527683 SCAF11Q99590 1463 aaKnown RBP8.73□□□□□ -1.01
LINC01001-202ENST00000527683 ITGBL1O95965 494 aaPredicted RBP8.73□□□□□ -1.01
LINC01001-202ENST00000527683 TJAP1Q5JTD0 557 aa8.73□□□□□ -1.01
LINC01001-202ENST00000527683 TMEM94Q12767 1356 aa8.73□□□□□ -1.01
LINC01001-202ENST00000527683 MYOM3Q5VTT5 1437 aa8.72□□□□□ -1.01
LINC01001-202ENST00000527683 ARHGAP23Q9P227 1491 aa8.72□□□□□ -1.01
LINC01001-202ENST00000527683 CHIC2Q9UKJ5 165 aa8.72□□□□□ -1.01
LINC01001-202ENST00000527683 ARHGEF5Q12774 1597 aa8.72□□□□□ -1.01
LINC01001-202ENST00000527683 DEPDC5O75140 1603 aa8.72□□□□□ -1.01
LINC01001-202ENST00000527683 KIF15Q9NS87 1388 aa8.72□□□□□ -1.01
LINC01001-202ENST00000527683 ABCC5O15440 1437 aa8.71□□□□□ -1.01
LINC01001-202ENST00000527683 RNF40O75150 1001 aa8.71□□□□□ -1.02
LINC01001-202ENST00000527683 OATP04181 439 aa8.71□□□□□ -1.02
LINC01001-202ENST00000527683 IFFO2Q5TF58 517 aa8.71□□□□□ -1.02
LINC01001-202ENST00000527683 PPARGC1BQ86YN6 1023 aaKnown RBP8.71□□□□□ -1.02
LINC01001-202ENST00000527683 SLC52A1Q9NWF4 448 aa8.71□□□□□ -1.02
LINC01001-202ENST00000527683 SLAIN2Q9P270 581 aa8.71□□□□□ -1.02
LINC01001-202ENST00000527683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
LINC01001-202ENST00000527683 IRF6O14896 467 aa8.7□□□□□ -1.02
LINC01001-202ENST00000527683 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
LINC01001-202ENST00000527683 NYAP1Q6ZVC0 841 aa8.7□□□□□ -1.02
LINC01001-202ENST00000527683 ZC3H15Q8WU90 426 aaKnown RBP8.7□□□□□ -1.02
LINC01001-202ENST00000527683 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
LINC01001-202ENST00000527683 SLIT1O75093 1534 aa8.7□□□□□ -1.02
LINC01001-202ENST00000527683 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
LINC01001-202ENST00000527683 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
LINC01001-202ENST00000527683 BCANQ96GW7 911 aa8.68□□□□□ -1.02
LINC01001-202ENST00000527683 MTRQ99707 1265 aa8.68□□□□□ -1.02
LINC01001-202ENST00000527683 KANK1Q14678 1352 aa8.68□□□□□ -1.02
LINC01001-202ENST00000527683 ZMYND10O75800 440 aa8.67□□□□□ -1.02
LINC01001-202ENST00000527683 ZEB1P37275 1124 aaPredicted RBP8.67□□□□□ -1.02
LINC01001-202ENST00000527683 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
LINC01001-202ENST00000527683 DUOX2Q9NRD8 1548 aa8.67□□□□□ -1.02
LINC01001-202ENST00000527683 RRBP1Q9P2E9 1410 aaKnown RBP8.67□□□□□ -1.02
LINC01001-202ENST00000527683 TBX22Q9Y458 520 aa8.67□□□□□ -1.02
LINC01001-202ENST00000527683 IQGAP1P46940 1657 aa8.66□□□□□ -1.02
LINC01001-202ENST00000527683 RNF17Q9BXT8 1623 aaKnown RBP8.66□□□□□ -1.02
LINC01001-202ENST00000527683 MAST1Q9Y2H9 1570 aa8.66□□□□□ -1.02
LINC01001-202ENST00000527683 ERBINQ96RT1 1412 aa8.66□□□□□ -1.02
LINC01001-202ENST00000527683 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
LINC01001-202ENST00000527683 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
LINC01001-202ENST00000527683 STRCP1A6NGW2 1772 aa8.66□□□□□ -1.02
LINC01001-202ENST00000527683 MROH1Q8NDA8 1641 aa8.65□□□□□ -1.02
LINC01001-202ENST00000527683 NOS1P29475 1434 aa8.65□□□□□ -1.02
LINC01001-202ENST00000527683 ANKRD30AQ9BXX3 1397 aa8.65□□□□□ -1.02
LINC01001-202ENST00000527683 A0A0G2JS52 829 aa8.65□□□□□ -1.02
LINC01001-202ENST00000527683 BARGINQ6ZT62 677 aa8.65□□□□□ -1.02
LINC01001-202ENST00000527683 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
LINC01001-202ENST00000527683 MINK1Q8N4C8 1332 aaPredicted RBP8.64□□□□□ -1.03
LINC01001-202ENST00000527683 POLR1AO95602 1720 aaPredicted RBP8.64□□□□□ -1.03
LINC01001-202ENST00000527683 KCNC4Q03721 635 aa8.64□□□□□ -1.03
LINC01001-202ENST00000527683 C19orf44Q9H6X5 657 aa8.64□□□□□ -1.03
LINC01001-202ENST00000527683 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
LINC01001-202ENST00000527683 DAPK1P53355 1430 aa8.63□□□□□ -1.03
LINC01001-202ENST00000527683 MSH6P52701 1360 aa8.63□□□□□ -1.03
LINC01001-202ENST00000527683 TET3O43151 1660 aa8.63□□□□□ -1.03
LINC01001-202ENST00000527683 CFHP08603 1231 aa8.63□□□□□ -1.03
LINC01001-202ENST00000527683 COPS2P61201 443 aa8.63□□□□□ -1.03
LINC01001-202ENST00000527683 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
LINC01001-202ENST00000527683 JCADQ9P266 1359 aa8.62□□□□□ -1.03
LINC01001-202ENST00000527683 TULP1O00294 542 aaPredicted RBP8.62□□□□□ -1.03
LINC01001-202ENST00000527683 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
LINC01001-202ENST00000527683 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
LINC01001-202ENST00000527683 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC01001-202ENST00000527683 TMUB1Q9BVT8 246 aa8.62□□□□□ -1.03
LINC01001-202ENST00000527683 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
LINC01001-202ENST00000527683 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
LINC01001-202ENST00000527683 EFCAB6Q5THR3 1501 aa8.61□□□□□ -1.03
LINC01001-202ENST00000527683 UBR1Q8IWV7 1749 aa8.61□□□□□ -1.03
LINC01001-202ENST00000527683 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
LINC01001-202ENST00000527683 FAM50AQ14320 339 aaKnown RBP8.61□□□□□ -1.03
LINC01001-202ENST00000527683 ZNF772Q68DY9 489 aaPredicted RBP8.61□□□□□ -1.03
LINC01001-202ENST00000527683 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
LINC01001-202ENST00000527683 ZC3H13Q5T200 1668 aaKnown RBP8.61□□□□□ -1.03
LINC01001-202ENST00000527683 FGD6Q6ZV73 1430 aa8.61□□□□□ -1.03
LINC01001-202ENST00000527683 EIF2AK4Q9P2K8 1649 aaKnown RBP8.61□□□□□ -1.03
LINC01001-202ENST00000527683 LMTK2Q8IWU2 1503 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 SPATA31A6Q5VVP1 1343 aa8.6□□□□□ -1.03
LINC01001-202ENST00000527683 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms