RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PARD3Q8TEW0 1356 aa31.69■■■□□ 2.66
TRAPPC4-208ENST00000527680 NBPF14Q5TI25 921 aa31.68■■■□□ 2.66
TRAPPC4-208ENST00000527680 HDGFL2Q7Z4V5 671 aaPredicted RBP31.68■■■□□ 2.66
TRAPPC4-208ENST00000527680 SBNO2Q9Y2G9 1366 aa31.68■■■□□ 2.66
TRAPPC4-208ENST00000527680 PARP4Q9UKK3 1724 aaKnown RBP31.67■■■□□ 2.66
TRAPPC4-208ENST00000527680 COL18A1P39060 1754 aa31.67■■■□□ 2.66
TRAPPC4-208ENST00000527680 CDCA7Q9BWT1 371 aaPredicted RBP31.66■■■□□ 2.66
TRAPPC4-208ENST00000527680 SLC12A5Q9H2X9 1139 aa31.66■■■□□ 2.66
TRAPPC4-208ENST00000527680 LRP5O75197 1615 aa31.65■■■□□ 2.66
TRAPPC4-208ENST00000527680 CARD10Q9BWT7 1032 aa31.64■■■□□ 2.66
TRAPPC4-208ENST00000527680 NME9Q86XW9 330 aa31.63■■■□□ 2.65
TRAPPC4-208ENST00000527680 OVOS2A0A0G2JMS6 1433 aa31.63■■■□□ 2.65
TRAPPC4-208ENST00000527680 OVOS2A0A0J9YW53 1432 aa31.63■■■□□ 2.65
TRAPPC4-208ENST00000527680 OVOS2Q6IE36 1432 aa31.63■■■□□ 2.65
TRAPPC4-208ENST00000527680 RGPD5Q99666 1765 aa31.63■■■□□ 2.65
TRAPPC4-208ENST00000527680 TERF2IPQ9NYB0 399 aa31.62■■■□□ 2.65
TRAPPC4-208ENST00000527680 EXOC5O00471 708 aa31.59■■■□□ 2.65
TRAPPC4-208ENST00000527680 MARCH10Q8NA82 808 aaPredicted RBP31.58■■■□□ 2.65
TRAPPC4-208ENST00000527680 MON2Q7Z3U7 1717 aa31.58■■■□□ 2.65
TRAPPC4-208ENST00000527680 TRIM26Q12899 539 aaPredicted RBP31.57■■■□□ 2.64
TRAPPC4-208ENST00000527680 USP31Q70CQ4 1352 aa31.56■■■□□ 2.64
TRAPPC4-208ENST00000527680 NFAT5O94916 1531 aa31.55■■■□□ 2.64
TRAPPC4-208ENST00000527680 BCL11BQ9C0K0 894 aaPredicted RBP31.55■■■□□ 2.64
TRAPPC4-208ENST00000527680 LRRC37A3O60309 1634 aa31.54■■■□□ 2.64
TRAPPC4-208ENST00000527680 ST20-MTHFSA0A0A6YYL1 179 aa31.54■■■□□ 2.64
TRAPPC4-208ENST00000527680 PUS7Q96PZ0 661 aaKnown RBP31.54■■■□□ 2.64
TRAPPC4-208ENST00000527680 NLRP2Q9NX02 1062 aa31.54■■■□□ 2.64
TRAPPC4-208ENST00000527680 CD163L1Q9NR16 1453 aa31.53■■■□□ 2.64
TRAPPC4-208ENST00000527680 PLSCR1O15162 318 aa31.53■■■□□ 2.64
TRAPPC4-208ENST00000527680 CCDC7Q96M83 1385 aa31.53■■■□□ 2.64
TRAPPC4-208ENST00000527680 RREB1Q92766 1687 aa31.51■■■□□ 2.64
TRAPPC4-208ENST00000527680 PTF1AQ7RTS3 328 aa31.51■■■□□ 2.63
TRAPPC4-208ENST00000527680 PEAK1Q9H792 1746 aa31.51■■■□□ 2.63
TRAPPC4-208ENST00000527680 EDC4Q6P2E9 1401 aaKnown RBP31.5■■■□□ 2.63
TRAPPC4-208ENST00000527680 SBF2Q86WG5 1849 aa31.5■■■□□ 2.63
TRAPPC4-208ENST00000527680 SLC24A1O60721 1099 aa31.5■■■□□ 2.63
TRAPPC4-208ENST00000527680 NUP188Q5SRE5 1749 aa31.49■■■□□ 2.63
TRAPPC4-208ENST00000527680 A0A1W2PP64 1363 aa31.48■■■□□ 2.63
TRAPPC4-208ENST00000527680 WNK3Q9BYP7 1800 aa31.47■■■□□ 2.63
TRAPPC4-208ENST00000527680 ANKRD24Q8TF21 1146 aa31.46■■■□□ 2.63
TRAPPC4-208ENST00000527680 TESK2Q96S53 571 aa31.46■■■□□ 2.63
TRAPPC4-208ENST00000527680 ERBB3P21860 1342 aa31.46■■■□□ 2.63
TRAPPC4-208ENST00000527680 ABCC6O95255 1503 aa31.44■■■□□ 2.62
TRAPPC4-208ENST00000527680 IL2RBP14784 551 aa31.43■■■□□ 2.62
TRAPPC4-208ENST00000527680 LTN1O94822 1766 aa31.43■■■□□ 2.62
TRAPPC4-208ENST00000527680 SPON1Q9HCB6 807 aa31.42■■■□□ 2.62
TRAPPC4-208ENST00000527680 PPP1R1BQ9UD71 204 aaPredicted RBP31.42■■■□□ 2.62
TRAPPC4-208ENST00000527680 BCL9O00512 1426 aa31.41■■■□□ 2.62
TRAPPC4-208ENST00000527680 LTV1Q96GA3 475 aaPredicted RBP31.41■■■□□ 2.62
TRAPPC4-208ENST00000527680 COG3Q96JB2 828 aa31.41■■■□□ 2.62
TRAPPC4-208ENST00000527680 NINLQ9Y2I6 1382 aa31.41■■■□□ 2.62
TRAPPC4-208ENST00000527680 USP54Q70EL1 1684 aa31.39■■■□□ 2.62
TRAPPC4-208ENST00000527680 KCNQ2O43526 872 aa31.39■■■□□ 2.62
TRAPPC4-208ENST00000527680 PROM2Q8N271 834 aa31.39■■■□□ 2.62
TRAPPC4-208ENST00000527680 ACSBG1Q96GR2 724 aa31.39■■■□□ 2.62
TRAPPC4-208ENST00000527680 KAT6BQ8WYB5 2073 aa31.38■■■□□ 2.61
TRAPPC4-208ENST00000527680 IP6K1Q92551 441 aa31.38■■■□□ 2.61
TRAPPC4-208ENST00000527680 TMF1P82094 1093 aa31.37■■■□□ 2.61
TRAPPC4-208ENST00000527680 TNS2Q63HR2 1409 aa31.36■■■□□ 2.61
TRAPPC4-208ENST00000527680 TXNRD1Q16881 649 aa31.36■■■□□ 2.61
TRAPPC4-208ENST00000527680 AMPHP49418 695 aa31.35■■■□□ 2.61
TRAPPC4-208ENST00000527680 ANO8Q9HCE9 1232 aaPredicted RBP31.35■■■□□ 2.61
TRAPPC4-208ENST00000527680 RGPD3A6NKT7 1758 aaPredicted RBP31.35■■■□□ 2.61
TRAPPC4-208ENST00000527680 RGPD4Q7Z3J3 1758 aa31.35■■■□□ 2.61
TRAPPC4-208ENST00000527680 FBLN1P23142 703 aa31.32■■■□□ 2.6
TRAPPC4-208ENST00000527680 STK32BQ9NY57 414 aa31.32■■■□□ 2.6
TRAPPC4-208ENST00000527680 DDX54Q8TDD1 881 aaKnown RBP31.3■■■□□ 2.6
TRAPPC4-208ENST00000527680 USP47Q96K76 1375 aa31.3■■■□□ 2.6
TRAPPC4-208ENST00000527680 MAP3K19Q56UN5 1328 aa31.29■■■□□ 2.6
TRAPPC4-208ENST00000527680 ANKRD36BQ8N2N9 1353 aa31.28■■■□□ 2.6
TRAPPC4-208ENST00000527680 HOXC9P31274 260 aa31.27■■■□□ 2.6
TRAPPC4-208ENST00000527680 CDCA8Q53HL2 280 aa31.26■■■□□ 2.59
TRAPPC4-208ENST00000527680 PDGFDQ9GZP0 370 aaPredicted RBP31.26■■■□□ 2.59
TRAPPC4-208ENST00000527680 DCAF8L1A6NGE4 600 aa31.25■■■□□ 2.59
TRAPPC4-208ENST00000527680 ZBTB7AO95365 584 aa31.25■■■□□ 2.59
TRAPPC4-208ENST00000527680 SLC15A2Q16348 729 aa31.25■■■□□ 2.59
TRAPPC4-208ENST00000527680 GGNBP2Q9H3C7 697 aa31.25■■■□□ 2.59
TRAPPC4-208ENST00000527680 FYB1O15117 783 aa31.23■■■□□ 2.59
TRAPPC4-208ENST00000527680 RRS1Q15050 365 aaKnown RBP31.22■■■□□ 2.59
TRAPPC4-208ENST00000527680 ATF5Q9Y2D1 282 aaPredicted RBP31.22■■■□□ 2.59
TRAPPC4-208ENST00000527680 PCGF6Q9BYE7 350 aa31.21■■■□□ 2.59
TRAPPC4-208ENST00000527680 NHSQ6T4R5 1651 aa31.2■■■□□ 2.59
TRAPPC4-208ENST00000527680 SYTL4Q96C24 671 aaPredicted RBP31.18■■■□□ 2.58
TRAPPC4-208ENST00000527680 ZCRB1Q8TBF4 217 aaKnown RBP31.16■■■□□ 2.58
TRAPPC4-208ENST00000527680 FAM208AQ9UK61 1670 aaKnown RBP31.16■■■□□ 2.58
TRAPPC4-208ENST00000527680 TIMELESSQ9UNS1 1208 aa31.15■■■□□ 2.58
TRAPPC4-208ENST00000527680 CASZ1Q86V15 1759 aa31.14■■■□□ 2.58
TRAPPC4-208ENST00000527680 BTAF1O14981 1849 aa31.14■■■□□ 2.58
TRAPPC4-208ENST00000527680 PRIM1P49642 420 aaKnown RBP31.12■■■□□ 2.57
TRAPPC4-208ENST00000527680 NBPF6Q5VWK0 638 aa31.12■■■□□ 2.57
TRAPPC4-208ENST00000527680 NBPF4Q96M43 638 aa31.12■■■□□ 2.57
TRAPPC4-208ENST00000527680 RTL1A6NKG5 1358 aa31.11■■■□□ 2.57
TRAPPC4-208ENST00000527680 RGPD2P0DJD1 1756 aa31.11■■■□□ 2.57
TRAPPC4-208ENST00000527680 USHBP1Q8N6Y0 703 aa31.11■■■□□ 2.57
TRAPPC4-208ENST00000527680 PTGER2P43116 358 aa31.1■■■□□ 2.57
TRAPPC4-208ENST00000527680 RAPGEF4Q8WZA2 1011 aa31.1■■■□□ 2.57
TRAPPC4-208ENST00000527680 MTFR1LQ9H019 292 aa31.1■■■□□ 2.57
TRAPPC4-208ENST00000527680 LRRC4BQ9NT99 713 aa31.09■■■□□ 2.57
TRAPPC4-208ENST00000527680 SMG6Q86US8 1419 aaKnown RBP31.08■■■□□ 2.57
TRAPPC4-208ENST00000527680 YY1P25490 414 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms