RNA–Protein interactions for RNA: ENST00000527667.5

C11orf49-213, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 530 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-213ENST00000527667 BTG4Q9NY30 223 aa10.44□□□□□ -0.74
C11orf49-213ENST00000527667 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
C11orf49-213ENST00000527667 SLC12A5Q9H2X9 1139 aa10.43□□□□□ -0.74
C11orf49-213ENST00000527667 PPP1R1BQ9UD71 204 aaPredicted RBP10.43□□□□□ -0.74
C11orf49-213ENST00000527667 CPSF1Q10570 1443 aaKnown RBP10.42□□□□□ -0.74
C11orf49-213ENST00000527667 SPATA31A5Q5VU36 1347 aa10.42□□□□□ -0.74
C11orf49-213ENST00000527667 SPATA31A7Q8IWB4 1347 aa10.42□□□□□ -0.74
C11orf49-213ENST00000527667 USP54Q70EL1 1684 aa10.42□□□□□ -0.74
C11orf49-213ENST00000527667 APBA3O96018 575 aa10.42□□□□□ -0.74
C11orf49-213ENST00000527667 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
C11orf49-213ENST00000527667 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
C11orf49-213ENST00000527667 POLR3AO14802 1390 aaPredicted RBP10.41□□□□□ -0.74
C11orf49-213ENST00000527667 NINLQ9Y2I6 1382 aa10.41□□□□□ -0.74
C11orf49-213ENST00000527667 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
C11orf49-213ENST00000527667 CABP1Q9NZU7 370 aa10.41□□□□□ -0.74
C11orf49-213ENST00000527667 USP6P35125 1406 aa10.41□□□□□ -0.74
C11orf49-213ENST00000527667 SSH2Q76I76 1423 aa10.41□□□□□ -0.74
C11orf49-213ENST00000527667 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
C11orf49-213ENST00000527667 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.74
C11orf49-213ENST00000527667 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.74
C11orf49-213ENST00000527667 KCNQ2O43526 872 aa10.4□□□□□ -0.74
C11orf49-213ENST00000527667 SPON1Q9HCB6 807 aa10.4□□□□□ -0.74
C11orf49-213ENST00000527667 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.74
C11orf49-213ENST00000527667 SBF2Q86WG5 1849 aa10.4□□□□□ -0.75
C11orf49-213ENST00000527667 ACEP12821 1306 aa10.39□□□□□ -0.75
C11orf49-213ENST00000527667 C1QTNF8P60827 252 aa10.39□□□□□ -0.75
C11orf49-213ENST00000527667 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
C11orf49-213ENST00000527667 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
C11orf49-213ENST00000527667 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
C11orf49-213ENST00000527667 SBNO1A3KN83 1393 aa10.39□□□□□ -0.75
C11orf49-213ENST00000527667 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
C11orf49-213ENST00000527667 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
C11orf49-213ENST00000527667 CDCA8Q53HL2 280 aa10.38□□□□□ -0.75
C11orf49-213ENST00000527667 CARD14Q9BXL6 1004 aa10.38□□□□□ -0.75
C11orf49-213ENST00000527667 ARHGEF10O15013 1369 aa10.38□□□□□ -0.75
C11orf49-213ENST00000527667 PARD3Q8TEW0 1356 aa10.38□□□□□ -0.75
C11orf49-213ENST00000527667 PANK3Q9H999 370 aa10.37□□□□□ -0.75
C11orf49-213ENST00000527667 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
C11orf49-213ENST00000527667 SPATA31A1Q5TZJ5 1347 aa10.36□□□□□ -0.75
C11orf49-213ENST00000527667 EDC4Q6P2E9 1401 aaKnown RBP10.36□□□□□ -0.75
C11orf49-213ENST00000527667 PSME1Q06323 249 aa10.36□□□□□ -0.75
C11orf49-213ENST00000527667 FAM196AQ6ZSG2 479 aa10.36□□□□□ -0.75
C11orf49-213ENST00000527667 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
C11orf49-213ENST00000527667 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
C11orf49-213ENST00000527667 LTN1O94822 1766 aa10.36□□□□□ -0.75
C11orf49-213ENST00000527667 RGPD4Q7Z3J3 1758 aa10.36□□□□□ -0.75
C11orf49-213ENST00000527667 NBPF14Q5TI25 921 aa10.35□□□□□ -0.75
C11orf49-213ENST00000527667 PEAK1Q9H792 1746 aa10.35□□□□□ -0.75
C11orf49-213ENST00000527667 OVOS2A0A0J9YW53 1432 aa10.34□□□□□ -0.75
C11orf49-213ENST00000527667 OVOS2Q6IE36 1432 aa10.34□□□□□ -0.75
C11orf49-213ENST00000527667 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
C11orf49-213ENST00000527667 CHRNA2Q15822 529 aa10.34□□□□□ -0.75
C11orf49-213ENST00000527667 NGDNQ8NEJ9 315 aaKnown RBP10.34□□□□□ -0.75
C11orf49-213ENST00000527667 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
C11orf49-213ENST00000527667 USP35Q9P2H5 1018 aa10.34□□□□□ -0.75
C11orf49-213ENST00000527667 TTC21BQ7Z4L5 1316 aa10.33□□□□□ -0.76
C11orf49-213ENST00000527667 SLIT3O75094 1523 aa10.33□□□□□ -0.76
C11orf49-213ENST00000527667 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
C11orf49-213ENST00000527667 ZBTB7AO95365 584 aa10.33□□□□□ -0.76
C11orf49-213ENST00000527667 NME9Q86XW9 330 aa10.33□□□□□ -0.76
C11orf49-213ENST00000527667 MAP2P11137 1827 aaKnown RBP10.33□□□□□ -0.76
C11orf49-213ENST00000527667 NFAT5O94916 1531 aa10.33□□□□□ -0.76
C11orf49-213ENST00000527667 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
C11orf49-213ENST00000527667 HDGFL2Q7Z4V5 671 aaPredicted RBP10.32□□□□□ -0.76
C11orf49-213ENST00000527667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.32□□□□□ -0.76
C11orf49-213ENST00000527667 TERF2IPQ9NYB0 399 aa10.32□□□□□ -0.76
C11orf49-213ENST00000527667 SHANK3Q9BYB0 1731 aa10.32□□□□□ -0.76
C11orf49-213ENST00000527667 GOLGB1Q14789 3259 aaKnown RBP10.32□□□□□ -0.76
C11orf49-213ENST00000527667 RGPD5Q99666 1765 aa10.31□□□□□ -0.76
C11orf49-213ENST00000527667 KIAA0232Q92628 1395 aa10.31□□□□□ -0.76
C11orf49-213ENST00000527667 PTGER2P43116 358 aa10.31□□□□□ -0.76
C11orf49-213ENST00000527667 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
C11orf49-213ENST00000527667 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
C11orf49-213ENST00000527667 NUTM2GQ5VZR2 741 aa10.31□□□□□ -0.76
C11orf49-213ENST00000527667 PROM2Q8N271 834 aa10.31□□□□□ -0.76
C11orf49-213ENST00000527667 PRDM11Q9NQV5 511 aa10.31□□□□□ -0.76
C11orf49-213ENST00000527667 LRRC37A3O60309 1634 aa10.3□□□□□ -0.76
C11orf49-213ENST00000527667 FHDC1Q9C0D6 1143 aaPredicted RBP10.3□□□□□ -0.76
C11orf49-213ENST00000527667 GGNBP2Q9H3C7 697 aa10.3□□□□□ -0.76
C11orf49-213ENST00000527667 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
C11orf49-213ENST00000527667 WNK3Q9BYP7 1800 aa10.3□□□□□ -0.76
C11orf49-213ENST00000527667 COL18A1P39060 1754 aa10.29□□□□□ -0.76
C11orf49-213ENST00000527667 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
C11orf49-213ENST00000527667 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
C11orf49-213ENST00000527667 CC2D1BQ5T0F9 858 aaKnown RBP10.29□□□□□ -0.76
C11orf49-213ENST00000527667 USP31Q70CQ4 1352 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 FYB1O15117 783 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
C11orf49-213ENST00000527667 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 SYT17Q9BSW7 474 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 RGPD2P0DJD1 1756 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 USP19O94966 1318 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
C11orf49-213ENST00000527667 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.76
C11orf49-213ENST00000527667 NPC1L1Q9UHC9 1359 aa10.27□□□□□ -0.76
C11orf49-213ENST00000527667 FBLN1P23142 703 aa10.27□□□□□ -0.77
C11orf49-213ENST00000527667 ZC3H6P61129 1189 aaKnown RBP10.27□□□□□ -0.77
C11orf49-213ENST00000527667 LARP1Q6PKG0 1096 aaKnown RBP10.27□□□□□ -0.77
C11orf49-213ENST00000527667 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
C11orf49-213ENST00000527667 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms