RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
SSBP3-210ENST00000525990 RREB1Q92766 1687 aa17.07■□□□□ 0.32
SSBP3-210ENST00000525990 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
SSBP3-210ENST00000525990 TRIM37O94972 964 aa17.05■□□□□ 0.32
SSBP3-210ENST00000525990 BAG6P46379 1132 aa17.05■□□□□ 0.32
SSBP3-210ENST00000525990 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
SSBP3-210ENST00000525990 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
SSBP3-210ENST00000525990 MYOM1P52179 1685 aa17.04■□□□□ 0.32
SSBP3-210ENST00000525990 USP47Q96K76 1375 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 OVOS2A0A0J9YW53 1432 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 OVOS2Q6IE36 1432 aa17.03■□□□□ 0.32
SSBP3-210ENST00000525990 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.32
SSBP3-210ENST00000525990 ABCC6O95255 1503 aa17.02■□□□□ 0.32
SSBP3-210ENST00000525990 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-210ENST00000525990 PDE3BQ13370 1112 aa17.02■□□□□ 0.32
SSBP3-210ENST00000525990 EZH2Q15910 746 aaKnown RBP17.02■□□□□ 0.32
SSBP3-210ENST00000525990 FAM196AQ6ZSG2 479 aa17.02■□□□□ 0.32
SSBP3-210ENST00000525990 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-210ENST00000525990 THRAP3Q9Y2W1 955 aaKnown RBP17.02■□□□□ 0.32
SSBP3-210ENST00000525990 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
SSBP3-210ENST00000525990 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
SSBP3-210ENST00000525990 LRP5O75197 1615 aa16.99■□□□□ 0.31
SSBP3-210ENST00000525990 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
SSBP3-210ENST00000525990 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
SSBP3-210ENST00000525990 CAMKK2Q96RR4 588 aa16.98■□□□□ 0.31
SSBP3-210ENST00000525990 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
SSBP3-210ENST00000525990 APBA3O96018 575 aa16.97■□□□□ 0.31
SSBP3-210ENST00000525990 FBLN1P23142 703 aa16.97■□□□□ 0.31
SSBP3-210ENST00000525990 DDB1Q16531 1140 aa16.96■□□□□ 0.31
SSBP3-210ENST00000525990 PTF1AQ7RTS3 328 aa16.96■□□□□ 0.31
SSBP3-210ENST00000525990 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
SSBP3-210ENST00000525990 ERBB3P21860 1342 aa16.96■□□□□ 0.3
SSBP3-210ENST00000525990 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
SSBP3-210ENST00000525990 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-210ENST00000525990 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
SSBP3-210ENST00000525990 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
SSBP3-210ENST00000525990 ANKRD36BQ8N2N9 1353 aa16.95■□□□□ 0.3
SSBP3-210ENST00000525990 NINLQ9Y2I6 1382 aa16.95■□□□□ 0.3
SSBP3-210ENST00000525990 R3HDM1Q15032 1099 aaKnown RBP16.94■□□□□ 0.3
SSBP3-210ENST00000525990 MARCH10Q8NA82 808 aaPredicted RBP16.94■□□□□ 0.3
SSBP3-210ENST00000525990 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
SSBP3-210ENST00000525990 CCDC7Q96M83 1385 aa16.92■□□□□ 0.3
SSBP3-210ENST00000525990 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
SSBP3-210ENST00000525990 TMF1P82094 1093 aa16.92■□□□□ 0.3
SSBP3-210ENST00000525990 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
SSBP3-210ENST00000525990 SHANK3Q9BYB0 1731 aa16.92■□□□□ 0.3
SSBP3-210ENST00000525990 NLRP2Q9NX02 1062 aa16.91■□□□□ 0.3
SSBP3-210ENST00000525990 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
SSBP3-210ENST00000525990 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
SSBP3-210ENST00000525990 BTAF1O14981 1849 aa16.89■□□□□ 0.29
SSBP3-210ENST00000525990 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-210ENST00000525990 COG3Q96JB2 828 aa16.89■□□□□ 0.29
SSBP3-210ENST00000525990 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
SSBP3-210ENST00000525990 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
SSBP3-210ENST00000525990 CDCA7Q9BWT1 371 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-210ENST00000525990 KAT6BQ8WYB5 2073 aa16.88■□□□□ 0.29
SSBP3-210ENST00000525990 FYB1O15117 783 aa16.87■□□□□ 0.29
SSBP3-210ENST00000525990 IP6K1Q92551 441 aa16.87■□□□□ 0.29
SSBP3-210ENST00000525990 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
SSBP3-210ENST00000525990 EXOC5O00471 708 aa16.86■□□□□ 0.29
SSBP3-210ENST00000525990 RRS1Q15050 365 aaKnown RBP16.86■□□□□ 0.29
SSBP3-210ENST00000525990 BCL9O00512 1426 aa16.86■□□□□ 0.29
SSBP3-210ENST00000525990 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
SSBP3-210ENST00000525990 KCNQ2O43526 872 aa16.85■□□□□ 0.29
SSBP3-210ENST00000525990 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
SSBP3-210ENST00000525990 HOXC9P31274 260 aa16.85■□□□□ 0.29
SSBP3-210ENST00000525990 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
SSBP3-210ENST00000525990 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
SSBP3-210ENST00000525990 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
SSBP3-210ENST00000525990 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
SSBP3-210ENST00000525990 IL2RBP14784 551 aa16.84■□□□□ 0.29
SSBP3-210ENST00000525990 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-210ENST00000525990 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-210ENST00000525990 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
SSBP3-210ENST00000525990 ACSBG1Q96GR2 724 aa16.83■□□□□ 0.28
SSBP3-210ENST00000525990 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-210ENST00000525990 MEGF6O75095 1541 aa16.82■□□□□ 0.28
SSBP3-210ENST00000525990 C11orf95C9JLR9 678 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-210ENST00000525990 AMPHP49418 695 aa16.82■□□□□ 0.28
SSBP3-210ENST00000525990 PROM2Q8N271 834 aa16.82■□□□□ 0.28
SSBP3-210ENST00000525990 PLSCR1O15162 318 aa16.81■□□□□ 0.28
SSBP3-210ENST00000525990 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
SSBP3-210ENST00000525990 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
SSBP3-210ENST00000525990 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
SSBP3-210ENST00000525990 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
SSBP3-210ENST00000525990 CDCA8Q53HL2 280 aa16.79■□□□□ 0.28
SSBP3-210ENST00000525990 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
SSBP3-210ENST00000525990 NBPF14Q5TI25 921 aa16.77■□□□□ 0.28
SSBP3-210ENST00000525990 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
SSBP3-210ENST00000525990 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
SSBP3-210ENST00000525990 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
SSBP3-210ENST00000525990 PDGFDQ9GZP0 370 aaPredicted RBP16.77■□□□□ 0.28
SSBP3-210ENST00000525990 EMILIN1Q9Y6C2 1016 aa16.77■□□□□ 0.28
SSBP3-210ENST00000525990 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.27
SSBP3-210ENST00000525990 TXNRD1Q16881 649 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms