RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 TCP11L2Q8N4U5 519 aa11.57□□□□□ -0.56
PABPC4-220ENST00000525669 SBNO1A3KN83 1393 aa11.56□□□□□ -0.56
PABPC4-220ENST00000525669 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
PABPC4-220ENST00000525669 ABCA3Q99758 1704 aa11.56□□□□□ -0.56
PABPC4-220ENST00000525669 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
PABPC4-220ENST00000525669 FLT4P35916 1363 aa11.55□□□□□ -0.56
PABPC4-220ENST00000525669 TNS3Q68CZ2 1445 aa11.54□□□□□ -0.56
PABPC4-220ENST00000525669 HOXC9P31274 260 aa11.54□□□□□ -0.56
PABPC4-220ENST00000525669 PRKAR2BP31323 418 aa11.54□□□□□ -0.56
PABPC4-220ENST00000525669 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
PABPC4-220ENST00000525669 RSPH6AQ9H0K4 717 aa11.54□□□□□ -0.56
PABPC4-220ENST00000525669 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
PABPC4-220ENST00000525669 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
PABPC4-220ENST00000525669 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
PABPC4-220ENST00000525669 USP19O94966 1318 aa11.53□□□□□ -0.56
PABPC4-220ENST00000525669 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
PABPC4-220ENST00000525669 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
PABPC4-220ENST00000525669 FCHSD2O94868 740 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 GCP02774 474 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 PDE3BQ13370 1112 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 KCNH5Q8NCM2 988 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 SPATA31A3Q5VYP0 1347 aa11.52□□□□□ -0.57
PABPC4-220ENST00000525669 COL18A1P39060 1754 aa11.51□□□□□ -0.57
PABPC4-220ENST00000525669 ZC3H6P61129 1189 aaKnown RBP11.51□□□□□ -0.57
PABPC4-220ENST00000525669 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
PABPC4-220ENST00000525669 SULT6B1Q6IMI4 303 aa11.51□□□□□ -0.57
PABPC4-220ENST00000525669 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
PABPC4-220ENST00000525669 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
PABPC4-220ENST00000525669 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
PABPC4-220ENST00000525669 IRX6P78412 446 aaPredicted RBP11.5□□□□□ -0.57
PABPC4-220ENST00000525669 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
PABPC4-220ENST00000525669 PNNQ9H307 717 aaKnown RBP11.5□□□□□ -0.57
PABPC4-220ENST00000525669 RTL1A6NKG5 1358 aa11.5□□□□□ -0.57
PABPC4-220ENST00000525669 RIPK4P57078 832 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 SLFN5Q08AF3 891 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 IP6K1Q92551 441 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 EYA1Q99502 592 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 SOS2Q07890 1332 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-220ENST00000525669 ARHGEF10O15013 1369 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 KIF24Q5T7B8 1368 aa11.49□□□□□ -0.57
PABPC4-220ENST00000525669 NEFMP07197 916 aa11.48□□□□□ -0.57
PABPC4-220ENST00000525669 FKBP8Q14318 412 aa11.48□□□□□ -0.57
PABPC4-220ENST00000525669 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
PABPC4-220ENST00000525669 VIRMAQ69YN4 1812 aaKnown RBP11.48□□□□□ -0.57
PABPC4-220ENST00000525669 CAMTA1Q9Y6Y1 1673 aa11.47□□□□□ -0.57
PABPC4-220ENST00000525669 AHDC1Q5TGY3 1603 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-220ENST00000525669 IGSF1Q8N6C5 1336 aa11.47□□□□□ -0.57
PABPC4-220ENST00000525669 DUSP27Q5VZP5 1158 aa11.47□□□□□ -0.57
PABPC4-220ENST00000525669 LRRC59Q96AG4 307 aaKnown RBP11.47□□□□□ -0.57
PABPC4-220ENST00000525669 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
PABPC4-220ENST00000525669 CHRNA2Q15822 529 aa11.46□□□□□ -0.57
PABPC4-220ENST00000525669 NFE2L2Q16236 605 aa11.46□□□□□ -0.57
PABPC4-220ENST00000525669 CCDC27Q2M243 656 aa11.46□□□□□ -0.57
PABPC4-220ENST00000525669 NGEFQ8N5V2 710 aa11.46□□□□□ -0.57
PABPC4-220ENST00000525669 NEFLP07196 543 aa11.45□□□□□ -0.58
PABPC4-220ENST00000525669 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
PABPC4-220ENST00000525669 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
PABPC4-220ENST00000525669 TRMT2AQ8IZ69 625 aaKnown RBP11.45□□□□□ -0.58
PABPC4-220ENST00000525669 ANKRD24Q8TF21 1146 aa11.45□□□□□ -0.58
PABPC4-220ENST00000525669 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
PABPC4-220ENST00000525669 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
PABPC4-220ENST00000525669 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
PABPC4-220ENST00000525669 KIAA0232Q92628 1395 aa11.44□□□□□ -0.58
PABPC4-220ENST00000525669 LMO7Q8WWI1 1683 aa11.44□□□□□ -0.58
PABPC4-220ENST00000525669 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
PABPC4-220ENST00000525669 E9PSI1 815 aa11.44□□□□□ -0.58
PABPC4-220ENST00000525669 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
PABPC4-220ENST00000525669 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
PABPC4-220ENST00000525669 RCAN3Q9UKA8 241 aa11.44□□□□□ -0.58
PABPC4-220ENST00000525669 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
PABPC4-220ENST00000525669 KDRP35968 1356 aa11.43□□□□□ -0.58
PABPC4-220ENST00000525669 COL22A1Q8NFW1 1626 aaPredicted RBP11.43□□□□□ -0.58
PABPC4-220ENST00000525669 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
PABPC4-220ENST00000525669 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
PABPC4-220ENST00000525669 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
PABPC4-220ENST00000525669 TSR2Q969E8 191 aaKnown RBP11.42□□□□□ -0.58
PABPC4-220ENST00000525669 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
PABPC4-220ENST00000525669 ABCC6O95255 1503 aa11.4□□□□□ -0.58
PABPC4-220ENST00000525669 UBAP1LF5GYI3 381 aa11.4□□□□□ -0.58
PABPC4-220ENST00000525669 MCM10Q7L590 875 aa11.4□□□□□ -0.58
PABPC4-220ENST00000525669 CPDO75976 1380 aa11.4□□□□□ -0.59
PABPC4-220ENST00000525669 PLCH1Q4KWH8 1693 aa11.4□□□□□ -0.59
PABPC4-220ENST00000525669 ERBB3P21860 1342 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 LRRC37A3O60309 1634 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 PLIN1O60240 522 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 TOM1O60784 492 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 NLRP2Q9NX02 1062 aa11.39□□□□□ -0.59
PABPC4-220ENST00000525669 COL14A1Q05707 1796 aaKnown RBP11.39□□□□□ -0.59
PABPC4-220ENST00000525669 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
PABPC4-220ENST00000525669 NCAPD2Q15021 1401 aa11.38□□□□□ -0.59
PABPC4-220ENST00000525669 RRP1P56182 461 aaKnown RBP11.38□□□□□ -0.59
PABPC4-220ENST00000525669 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms