RNA–Protein interactions for RNA: ENST00000525395.2

LRRK1-203, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-203ENST00000525395 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
LRRK1-203ENST00000525395 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
LRRK1-203ENST00000525395 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
LRRK1-203ENST00000525395 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
LRRK1-203ENST00000525395 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
LRRK1-203ENST00000525395 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
LRRK1-203ENST00000525395 APBA3O96018 575 aa13.39□□□□□ -0.27
LRRK1-203ENST00000525395 FBLN1P23142 703 aa13.39□□□□□ -0.27
LRRK1-203ENST00000525395 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
LRRK1-203ENST00000525395 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-203ENST00000525395 RGPD5Q99666 1765 aa13.39□□□□□ -0.27
LRRK1-203ENST00000525395 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
LRRK1-203ENST00000525395 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
LRRK1-203ENST00000525395 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
LRRK1-203ENST00000525395 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
LRRK1-203ENST00000525395 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
LRRK1-203ENST00000525395 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
LRRK1-203ENST00000525395 USP47Q96K76 1375 aa13.36□□□□□ -0.27
LRRK1-203ENST00000525395 MARCH10Q8NA82 808 aaPredicted RBP13.36□□□□□ -0.27
LRRK1-203ENST00000525395 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
LRRK1-203ENST00000525395 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
LRRK1-203ENST00000525395 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
LRRK1-203ENST00000525395 DDB1Q16531 1140 aa13.35□□□□□ -0.27
LRRK1-203ENST00000525395 PARP4Q9UKK3 1724 aaKnown RBP13.35□□□□□ -0.27
LRRK1-203ENST00000525395 OVOS2A0A0J9YW53 1432 aa13.33□□□□□ -0.28
LRRK1-203ENST00000525395 OVOS2Q6IE36 1432 aa13.33□□□□□ -0.28
LRRK1-203ENST00000525395 LRRC37A3O60309 1634 aa13.33□□□□□ -0.28
LRRK1-203ENST00000525395 USP54Q70EL1 1684 aa13.33□□□□□ -0.28
LRRK1-203ENST00000525395 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
LRRK1-203ENST00000525395 TMF1P82094 1093 aa13.32□□□□□ -0.28
LRRK1-203ENST00000525395 ANKRD24Q8TF21 1146 aa13.32□□□□□ -0.28
LRRK1-203ENST00000525395 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
LRRK1-203ENST00000525395 ERBB3P21860 1342 aa13.32□□□□□ -0.28
LRRK1-203ENST00000525395 FYB1O15117 783 aa13.31□□□□□ -0.28
LRRK1-203ENST00000525395 EXOC5O00471 708 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 PROM2Q8N271 834 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 IP6K1Q92551 441 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
LRRK1-203ENST00000525395 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 MAP3K19Q56UN5 1328 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 ANKRD36BQ8N2N9 1353 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
LRRK1-203ENST00000525395 KCNQ2O43526 872 aa13.29□□□□□ -0.28
LRRK1-203ENST00000525395 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
LRRK1-203ENST00000525395 COG3Q96JB2 828 aa13.29□□□□□ -0.28
LRRK1-203ENST00000525395 CDCA7Q9BWT1 371 aaPredicted RBP13.29□□□□□ -0.28
LRRK1-203ENST00000525395 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
LRRK1-203ENST00000525395 LTN1O94822 1766 aa13.29□□□□□ -0.28
LRRK1-203ENST00000525395 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
LRRK1-203ENST00000525395 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
LRRK1-203ENST00000525395 CCDC7Q96M83 1385 aa13.28□□□□□ -0.28
LRRK1-203ENST00000525395 HOXC9P31274 260 aa13.27□□□□□ -0.29
LRRK1-203ENST00000525395 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
LRRK1-203ENST00000525395 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
LRRK1-203ENST00000525395 ABCC6O95255 1503 aa13.27□□□□□ -0.29
LRRK1-203ENST00000525395 SBF2Q86WG5 1849 aa13.27□□□□□ -0.29
LRRK1-203ENST00000525395 PLSCR1O15162 318 aa13.26□□□□□ -0.29
LRRK1-203ENST00000525395 IL2RBP14784 551 aa13.26□□□□□ -0.29
LRRK1-203ENST00000525395 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
LRRK1-203ENST00000525395 RREB1Q92766 1687 aa13.26□□□□□ -0.29
LRRK1-203ENST00000525395 ACSBG1Q96GR2 724 aa13.26□□□□□ -0.29
LRRK1-203ENST00000525395 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
LRRK1-203ENST00000525395 BCL9O00512 1426 aa13.25□□□□□ -0.29
LRRK1-203ENST00000525395 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
LRRK1-203ENST00000525395 AMPHP49418 695 aa13.25□□□□□ -0.29
LRRK1-203ENST00000525395 TNS2Q63HR2 1409 aa13.24□□□□□ -0.29
LRRK1-203ENST00000525395 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-203ENST00000525395 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
LRRK1-203ENST00000525395 CDCA8Q53HL2 280 aa13.23□□□□□ -0.29
LRRK1-203ENST00000525395 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
LRRK1-203ENST00000525395 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
LRRK1-203ENST00000525395 LRP5O75197 1615 aa13.22□□□□□ -0.29
LRRK1-203ENST00000525395 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
LRRK1-203ENST00000525395 TXNRD1Q16881 649 aa13.22□□□□□ -0.29
LRRK1-203ENST00000525395 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
LRRK1-203ENST00000525395 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
LRRK1-203ENST00000525395 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
LRRK1-203ENST00000525395 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
LRRK1-203ENST00000525395 MYOM1P52179 1685 aa13.21□□□□□ -0.29
LRRK1-203ENST00000525395 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
LRRK1-203ENST00000525395 RGPD2P0DJD1 1756 aa13.21□□□□□ -0.29
LRRK1-203ENST00000525395 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
LRRK1-203ENST00000525395 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
LRRK1-203ENST00000525395 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
LRRK1-203ENST00000525395 MEGF6O75095 1541 aa13.18□□□□□ -0.3
LRRK1-203ENST00000525395 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
LRRK1-203ENST00000525395 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
LRRK1-203ENST00000525395 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
LRRK1-203ENST00000525395 NHSQ6T4R5 1651 aa13.16□□□□□ -0.3
LRRK1-203ENST00000525395 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
LRRK1-203ENST00000525395 KCNQ4P56696 695 aa13.16□□□□□ -0.3
LRRK1-203ENST00000525395 RGPD3A6NKT7 1758 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-203ENST00000525395 RGPD4Q7Z3J3 1758 aa13.16□□□□□ -0.3
LRRK1-203ENST00000525395 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
LRRK1-203ENST00000525395 INSRP06213 1382 aa13.16□□□□□ -0.3
LRRK1-203ENST00000525395 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
LRRK1-203ENST00000525395 PPM1GO15355 546 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-203ENST00000525395 PANK3Q9H999 370 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms