RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 TMEM131LA2VDJ0 1609 aa10.63□□□□□ -0.71
CASP4-205ENST00000525116 LRP6O75581 1613 aa10.63□□□□□ -0.71
CASP4-205ENST00000525116 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
CASP4-205ENST00000525116 TSR1Q2NL82 804 aaKnown RBP10.63□□□□□ -0.71
CASP4-205ENST00000525116 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
CASP4-205ENST00000525116 PARP9Q8IXQ6 854 aa10.63□□□□□ -0.71
CASP4-205ENST00000525116 ZDHHC16Q969W1 377 aa10.63□□□□□ -0.71
CASP4-205ENST00000525116 C19orf44Q9H6X5 657 aa10.63□□□□□ -0.71
CASP4-205ENST00000525116 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
CASP4-205ENST00000525116 NUDT7P0C024 238 aa10.62□□□□□ -0.71
CASP4-205ENST00000525116 ARSIQ5FYB1 569 aa10.62□□□□□ -0.71
CASP4-205ENST00000525116 NPDC1Q9NQX5 325 aaPredicted RBP10.62□□□□□ -0.71
CASP4-205ENST00000525116 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
CASP4-205ENST00000525116 AMOTL2Q9Y2J4 779 aa10.61□□□□□ -0.71
CASP4-205ENST00000525116 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
CASP4-205ENST00000525116 ADAMTS13Q76LX8 1427 aa10.6□□□□□ -0.71
CASP4-205ENST00000525116 POTEJP0CG39 1038 aa10.6□□□□□ -0.71
CASP4-205ENST00000525116 RXRBP28702 533 aa10.6□□□□□ -0.71
CASP4-205ENST00000525116 C6orf132Q5T0Z8 1188 aa10.6□□□□□ -0.71
CASP4-205ENST00000525116 NCOA3Q9Y6Q9 1424 aa10.59□□□□□ -0.71
CASP4-205ENST00000525116 ITGAEP38570 1179 aa10.59□□□□□ -0.71
CASP4-205ENST00000525116 BRINP3Q76B58 766 aa10.59□□□□□ -0.71
CASP4-205ENST00000525116 FAM117AQ9C073 453 aa10.59□□□□□ -0.71
CASP4-205ENST00000525116 E9PCH4 1651 aa10.58□□□□□ -0.72
CASP4-205ENST00000525116 SNPHO15079 494 aa10.58□□□□□ -0.72
CASP4-205ENST00000525116 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
CASP4-205ENST00000525116 PIK3R4Q99570 1358 aa10.57□□□□□ -0.72
CASP4-205ENST00000525116 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
CASP4-205ENST00000525116 CLCN1P35523 988 aa10.57□□□□□ -0.72
CASP4-205ENST00000525116 ZNF326Q5BKZ1 582 aaKnown RBP10.57□□□□□ -0.72
CASP4-205ENST00000525116 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
CASP4-205ENST00000525116 AHDC1Q5TGY3 1603 aaPredicted RBP10.57□□□□□ -0.72
CASP4-205ENST00000525116 AFF2P51816 1311 aa10.57□□□□□ -0.72
CASP4-205ENST00000525116 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
CASP4-205ENST00000525116 UNC13BO14795 1591 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 NUP155O75694 1391 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 OATP04181 439 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
CASP4-205ENST00000525116 DDX17Q92841 729 aaKnown RBP10.56□□□□□ -0.72
CASP4-205ENST00000525116 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
CASP4-205ENST00000525116 TRPM2O94759 1503 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
CASP4-205ENST00000525116 C8orf37Q96NL8 207 aa10.55□□□□□ -0.72
CASP4-205ENST00000525116 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
CASP4-205ENST00000525116 PADI6Q6TGC4 694 aa10.53□□□□□ -0.72
CASP4-205ENST00000525116 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
CASP4-205ENST00000525116 LRRC59Q96AG4 307 aaKnown RBP10.53□□□□□ -0.72
CASP4-205ENST00000525116 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
CASP4-205ENST00000525116 QTRT2Q9H974 415 aaKnown RBP10.53□□□□□ -0.72
CASP4-205ENST00000525116 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
CASP4-205ENST00000525116 IQGAP3Q86VI3 1631 aa10.53□□□□□ -0.72
CASP4-205ENST00000525116 METP08581 1390 aa10.52□□□□□ -0.72
CASP4-205ENST00000525116 MST1RQ04912 1400 aa10.52□□□□□ -0.73
CASP4-205ENST00000525116 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
CASP4-205ENST00000525116 MDM2Q00987 491 aaPredicted RBP10.52□□□□□ -0.73
CASP4-205ENST00000525116 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
CASP4-205ENST00000525116 ROCK1Q13464 1354 aa10.52□□□□□ -0.73
CASP4-205ENST00000525116 NGLY1Q96IV0 654 aa10.51□□□□□ -0.73
CASP4-205ENST00000525116 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
CASP4-205ENST00000525116 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
CASP4-205ENST00000525116 PRSS12P56730 875 aa10.5□□□□□ -0.73
CASP4-205ENST00000525116 RBM6P78332 1123 aaKnown RBP10.5□□□□□ -0.73
CASP4-205ENST00000525116 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
CASP4-205ENST00000525116 NRXN3Q9Y4C0 1643 aa10.5□□□□□ -0.73
CASP4-205ENST00000525116 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
CASP4-205ENST00000525116 DCCP43146 1447 aa10.5□□□□□ -0.73
CASP4-205ENST00000525116 CDK12Q9NYV4 1490 aaPredicted RBP10.49□□□□□ -0.73
CASP4-205ENST00000525116 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
CASP4-205ENST00000525116 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
CASP4-205ENST00000525116 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
CASP4-205ENST00000525116 RGS12O14924 1447 aa10.49□□□□□ -0.73
CASP4-205ENST00000525116 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
CASP4-205ENST00000525116 NHSL1Q5SYE7 1610 aa10.48□□□□□ -0.73
CASP4-205ENST00000525116 MS4A1P11836 297 aa10.48□□□□□ -0.73
CASP4-205ENST00000525116 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
CASP4-205ENST00000525116 PTPREP23469 700 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 ORAI2Q96SN7 254 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
CASP4-205ENST00000525116 SRCAPQ6ZRS2 3230 aa10.46□□□□□ -0.73
CASP4-205ENST00000525116 SSTR3P32745 418 aaPredicted RBP10.46□□□□□ -0.73
CASP4-205ENST00000525116 PHOX2BQ99453 314 aa10.46□□□□□ -0.73
CASP4-205ENST00000525116 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
CASP4-205ENST00000525116 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
CASP4-205ENST00000525116 USP21Q9UK80 565 aa10.46□□□□□ -0.73
CASP4-205ENST00000525116 NALCNQ8IZF0 1738 aa10.45□□□□□ -0.74
CASP4-205ENST00000525116 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
CASP4-205ENST00000525116 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
CASP4-205ENST00000525116 HOXB1P14653 301 aaPredicted RBP10.45□□□□□ -0.74
CASP4-205ENST00000525116 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
CASP4-205ENST00000525116 CLTCL1P53675 1640 aa10.44□□□□□ -0.74
CASP4-205ENST00000525116 NEXMIFQ5QGS0 1516 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms