RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.69■■□□□ 1.86
PTP4A3-206ENST00000524028 NFAT5O94916 1531 aa26.69■■□□□ 1.86
PTP4A3-206ENST00000524028 PARD3Q8TEW0 1356 aa26.68■■□□□ 1.86
PTP4A3-206ENST00000524028 DDB1Q16531 1140 aa26.67■■□□□ 1.86
PTP4A3-206ENST00000524028 TMC1Q8TDI8 760 aa26.67■■□□□ 1.86
PTP4A3-206ENST00000524028 SLC12A5Q9H2X9 1139 aa26.67■■□□□ 1.86
PTP4A3-206ENST00000524028 NME9Q86XW9 330 aa26.66■■□□□ 1.86
PTP4A3-206ENST00000524028 USP31Q70CQ4 1352 aa26.66■■□□□ 1.86
PTP4A3-206ENST00000524028 MON2Q7Z3U7 1717 aa26.65■■□□□ 1.86
PTP4A3-206ENST00000524028 LRRC37A3O60309 1634 aa26.65■■□□□ 1.86
PTP4A3-206ENST00000524028 CARD10Q9BWT7 1032 aa26.64■■□□□ 1.86
PTP4A3-206ENST00000524028 PEAK1Q9H792 1746 aa26.64■■□□□ 1.85
PTP4A3-206ENST00000524028 OVOS2A0A0G2JMS6 1433 aa26.64■■□□□ 1.85
PTP4A3-206ENST00000524028 OVOS2A0A0J9YW53 1432 aa26.64■■□□□ 1.85
PTP4A3-206ENST00000524028 OVOS2Q6IE36 1432 aa26.64■■□□□ 1.85
PTP4A3-206ENST00000524028 CSB-PGBD3P0DP91 1061 aa26.63■■□□□ 1.85
PTP4A3-206ENST00000524028 C11orf95C9JLR9 678 aaPredicted RBP26.62■■□□□ 1.85
PTP4A3-206ENST00000524028 MARCH10Q8NA82 808 aaPredicted RBP26.62■■□□□ 1.85
PTP4A3-206ENST00000524028 PTF1AQ7RTS3 328 aa26.61■■□□□ 1.85
PTP4A3-206ENST00000524028 HDGFL2Q7Z4V5 671 aaPredicted RBP26.61■■□□□ 1.85
PTP4A3-206ENST00000524028 RGPD5Q99666 1765 aa26.61■■□□□ 1.85
PTP4A3-206ENST00000524028 RREB1Q92766 1687 aa26.6■■□□□ 1.85
PTP4A3-206ENST00000524028 TESK2Q96S53 571 aa26.6■■□□□ 1.85
PTP4A3-206ENST00000524028 CDCA7Q9BWT1 371 aaPredicted RBP26.6■■□□□ 1.85
PTP4A3-206ENST00000524028 PUS7Q96PZ0 661 aaKnown RBP26.59■■□□□ 1.85
PTP4A3-206ENST00000524028 A0A1W2PP64 1363 aa26.58■■□□□ 1.85
PTP4A3-206ENST00000524028 ST20-MTHFSA0A0A6YYL1 179 aa26.58■■□□□ 1.85
PTP4A3-206ENST00000524028 TRIM26Q12899 539 aaPredicted RBP26.58■■□□□ 1.85
PTP4A3-206ENST00000524028 NUP188Q5SRE5 1749 aa26.58■■□□□ 1.85
PTP4A3-206ENST00000524028 EDC4Q6P2E9 1401 aaKnown RBP26.57■■□□□ 1.84
PTP4A3-206ENST00000524028 USP54Q70EL1 1684 aa26.57■■□□□ 1.84
PTP4A3-206ENST00000524028 WNK3Q9BYP7 1800 aa26.56■■□□□ 1.84
PTP4A3-206ENST00000524028 ABCC6O95255 1503 aa26.56■■□□□ 1.84
PTP4A3-206ENST00000524028 TERF2IPQ9NYB0 399 aa26.56■■□□□ 1.84
PTP4A3-206ENST00000524028 NBPF14Q5TI25 921 aa26.55■■□□□ 1.84
PTP4A3-206ENST00000524028 BCL11BQ9C0K0 894 aaPredicted RBP26.55■■□□□ 1.84
PTP4A3-206ENST00000524028 PLSCR1O15162 318 aa26.54■■□□□ 1.84
PTP4A3-206ENST00000524028 CCDC7Q96M83 1385 aa26.54■■□□□ 1.84
PTP4A3-206ENST00000524028 BCL9O00512 1426 aa26.54■■□□□ 1.84
PTP4A3-206ENST00000524028 EXOC5O00471 708 aa26.53■■□□□ 1.84
PTP4A3-206ENST00000524028 ERBB3P21860 1342 aa26.53■■□□□ 1.84
PTP4A3-206ENST00000524028 SBF2Q86WG5 1849 aa26.51■■□□□ 1.83
PTP4A3-206ENST00000524028 NLRP2Q9NX02 1062 aa26.5■■□□□ 1.83
PTP4A3-206ENST00000524028 PROM2Q8N271 834 aa26.49■■□□□ 1.83
PTP4A3-206ENST00000524028 ANKRD24Q8TF21 1146 aa26.49■■□□□ 1.83
PTP4A3-206ENST00000524028 TNS2Q63HR2 1409 aa26.47■■□□□ 1.83
PTP4A3-206ENST00000524028 NINLQ9Y2I6 1382 aa26.46■■□□□ 1.83
PTP4A3-206ENST00000524028 LTN1O94822 1766 aa26.46■■□□□ 1.83
PTP4A3-206ENST00000524028 ANO8Q9HCE9 1232 aaPredicted RBP26.45■■□□□ 1.82
PTP4A3-206ENST00000524028 RGPD3A6NKT7 1758 aaPredicted RBP26.44■■□□□ 1.82
PTP4A3-206ENST00000524028 RGPD4Q7Z3J3 1758 aa26.44■■□□□ 1.82
PTP4A3-206ENST00000524028 KCNQ2O43526 872 aa26.44■■□□□ 1.82
PTP4A3-206ENST00000524028 SLC24A1O60721 1099 aa26.43■■□□□ 1.82
PTP4A3-206ENST00000524028 IL2RBP14784 551 aa26.43■■□□□ 1.82
PTP4A3-206ENST00000524028 IP6K1Q92551 441 aa26.43■■□□□ 1.82
PTP4A3-206ENST00000524028 FBLN1P23142 703 aa26.42■■□□□ 1.82
PTP4A3-206ENST00000524028 COG3Q96JB2 828 aa26.4■■□□□ 1.82
PTP4A3-206ENST00000524028 USP47Q96K76 1375 aa26.4■■□□□ 1.82
PTP4A3-206ENST00000524028 ANKRD36BQ8N2N9 1353 aa26.39■■□□□ 1.82
PTP4A3-206ENST00000524028 TXNRD1Q16881 649 aa26.39■■□□□ 1.82
PTP4A3-206ENST00000524028 ACSBG1Q96GR2 724 aa26.39■■□□□ 1.82
PTP4A3-206ENST00000524028 MAP3K19Q56UN5 1328 aa26.39■■□□□ 1.81
PTP4A3-206ENST00000524028 LTV1Q96GA3 475 aaPredicted RBP26.38■■□□□ 1.81
PTP4A3-206ENST00000524028 PDGFDQ9GZP0 370 aaPredicted RBP26.38■■□□□ 1.81
PTP4A3-206ENST00000524028 SPON1Q9HCB6 807 aa26.38■■□□□ 1.81
PTP4A3-206ENST00000524028 TMF1P82094 1093 aa26.37■■□□□ 1.81
PTP4A3-206ENST00000524028 HOXC9P31274 260 aa26.35■■□□□ 1.81
PTP4A3-206ENST00000524028 FYB1O15117 783 aa26.34■■□□□ 1.81
PTP4A3-206ENST00000524028 NHSQ6T4R5 1651 aa26.32■■□□□ 1.8
PTP4A3-206ENST00000524028 AMPHP49418 695 aa26.32■■□□□ 1.8
PTP4A3-206ENST00000524028 GGNBP2Q9H3C7 697 aa26.32■■□□□ 1.8
PTP4A3-206ENST00000524028 STK32BQ9NY57 414 aa26.3■■□□□ 1.8
PTP4A3-206ENST00000524028 CASZ1Q86V15 1759 aa26.29■■□□□ 1.8
PTP4A3-206ENST00000524028 RRS1Q15050 365 aaKnown RBP26.29■■□□□ 1.8
PTP4A3-206ENST00000524028 SLC15A2Q16348 729 aa26.29■■□□□ 1.8
PTP4A3-206ENST00000524028 DDX54Q8TDD1 881 aaKnown RBP26.29■■□□□ 1.8
PTP4A3-206ENST00000524028 PPP1R1BQ9UD71 204 aaPredicted RBP26.29■■□□□ 1.8
PTP4A3-206ENST00000524028 ZBTB7AO95365 584 aa26.27■■□□□ 1.8
PTP4A3-206ENST00000524028 CARD14Q9BXL6 1004 aa26.25■■□□□ 1.79
PTP4A3-206ENST00000524028 TIMELESSQ9UNS1 1208 aa26.25■■□□□ 1.79
PTP4A3-206ENST00000524028 FAM208AQ9UK61 1670 aaKnown RBP26.25■■□□□ 1.79
PTP4A3-206ENST00000524028 RTL1A6NKG5 1358 aa26.24■■□□□ 1.79
PTP4A3-206ENST00000524028 CDCA8Q53HL2 280 aa26.24■■□□□ 1.79
PTP4A3-206ENST00000524028 PTGER2P43116 358 aa26.23■■□□□ 1.79
PTP4A3-206ENST00000524028 NBPF6Q5VWK0 638 aa26.23■■□□□ 1.79
PTP4A3-206ENST00000524028 NBPF4Q96M43 638 aa26.23■■□□□ 1.79
PTP4A3-206ENST00000524028 LRRC4BQ9NT99 713 aa26.23■■□□□ 1.79
PTP4A3-206ENST00000524028 ATF5Q9Y2D1 282 aaPredicted RBP26.23■■□□□ 1.79
PTP4A3-206ENST00000524028 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
PTP4A3-206ENST00000524028 BTAF1O14981 1849 aa26.21■■□□□ 1.79
PTP4A3-206ENST00000524028 MEGF6O75095 1541 aa26.21■■□□□ 1.79
PTP4A3-206ENST00000524028 USHBP1Q8N6Y0 703 aa26.2■■□□□ 1.78
PTP4A3-206ENST00000524028 ZCRB1Q8TBF4 217 aaKnown RBP26.2■■□□□ 1.78
PTP4A3-206ENST00000524028 PAPPAQ13219 1627 aa26.2■■□□□ 1.78
PTP4A3-206ENST00000524028 HSP90AB2PQ58FF8 381 aa26.19■■□□□ 1.78
PTP4A3-206ENST00000524028 RGPD2P0DJD1 1756 aa26.19■■□□□ 1.78
PTP4A3-206ENST00000524028 PRIM1P49642 420 aaKnown RBP26.18■■□□□ 1.78
PTP4A3-206ENST00000524028 ZNF827Q17R98 1081 aa26.18■■□□□ 1.78
PTP4A3-206ENST00000524028 CLSPNQ9HAW4 1339 aa26.17■■□□□ 1.78
PTP4A3-206ENST00000524028 SYTL4Q96C24 671 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms