RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-216	ENST00000523952	NLRP13	Q86W25	1043 aa		13.66	□□□□□ -0.22
PTPN12-216	ENST00000523952	DCAF11	Q8TEB1	546 aa		13.66	□□□□□ -0.22
PTPN12-216	ENST00000523952	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN12-216	ENST00000523952	CPD	O75976	1380 aa		13.66	□□□□□ -0.22
PTPN12-216	ENST00000523952	CDK19	Q9BWU1	502 aa		13.65	□□□□□ -0.22
PTPN12-216	ENST00000523952	STK32B	Q9NY57	414 aa		13.65	□□□□□ -0.22
PTPN12-216	ENST00000523952	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN12-216	ENST00000523952		U3KPZ7	1027 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN12-216	ENST00000523952	QRICH2	Q9H0J4	1663 aa		13.64	□□□□□ -0.23
PTPN12-216	ENST00000523952	POLR3A	O14802	1390 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN12-216	ENST00000523952	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN12-216	ENST00000523952	KIAA1210	Q9ULL0	1709 aa		13.64	□□□□□ -0.23
PTPN12-216	ENST00000523952	TOM1L2	Q6ZVM7	507 aa		13.63	□□□□□ -0.23
PTPN12-216	ENST00000523952	CCDC61	Q9Y6R9	512 aa		13.63	□□□□□ -0.23
PTPN12-216	ENST00000523952	GC	P02774	474 aa		13.62	□□□□□ -0.23
PTPN12-216	ENST00000523952	COL18A1	P39060	1754 aa		13.61	□□□□□ -0.23
PTPN12-216	ENST00000523952	C1QTNF8	P60827	252 aa		13.61	□□□□□ -0.23
PTPN12-216	ENST00000523952	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN12-216	ENST00000523952	USP19	O94966	1318 aa		13.61	□□□□□ -0.23
PTPN12-216	ENST00000523952	NHS	Q6T4R5	1651 aa		13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	BTAF1	O14981	1849 aa		13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	NPM3	O75607	178 aa	Known RBP	13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	SRPK2	P78362	688 aa	Known RBP	13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	STAC3	Q96MF2	364 aa		13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	SYT17	Q9BSW7	474 aa		13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN12-216	ENST00000523952	PPIP5K1	Q6PFW1	1433 aa		13.59	□□□□□ -0.23
PTPN12-216	ENST00000523952	PLEKHG3	A1L390	1219 aa		13.59	□□□□□ -0.23
PTPN12-216	ENST00000523952	MTFR1L	Q9H019	292 aa		13.59	□□□□□ -0.23
PTPN12-216	ENST00000523952	PTGER2	P43116	358 aa		13.58	□□□□□ -0.24
PTPN12-216	ENST00000523952	SLC15A2	Q16348	729 aa		13.58	□□□□□ -0.24
PTPN12-216	ENST00000523952	TXNRD1	Q16881	649 aa		13.58	□□□□□ -0.24
PTPN12-216	ENST00000523952	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN12-216	ENST00000523952	PIK3C2A	O00443	1686 aa		13.58	□□□□□ -0.24
PTPN12-216	ENST00000523952	QSER1	Q2KHR3	1735 aa		13.58	□□□□□ -0.24
PTPN12-216	ENST00000523952	CSB-PGBD3	P0DP91	1061 aa		13.57	□□□□□ -0.24
PTPN12-216	ENST00000523952	NLRP6	P59044	892 aa		13.57	□□□□□ -0.24
PTPN12-216	ENST00000523952	GPR162	Q16538	588 aa		13.57	□□□□□ -0.24
PTPN12-216	ENST00000523952	IFFO2	Q5TF58	517 aa		13.57	□□□□□ -0.24
PTPN12-216	ENST00000523952	LTN1	O94822	1766 aa		13.57	□□□□□ -0.24
PTPN12-216	ENST00000523952	AATK	Q6ZMQ8	1374 aa		13.57	□□□□□ -0.24
PTPN12-216	ENST00000523952	UTRN	P46939	3433 aa		13.56	□□□□□ -0.24
PTPN12-216	ENST00000523952	SLIT3	O75094	1523 aa		13.56	□□□□□ -0.24
PTPN12-216	ENST00000523952	GIGYF1	O75420	1035 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN12-216	ENST00000523952	PTF1A	Q7RTS3	328 aa		13.56	□□□□□ -0.24
PTPN12-216	ENST00000523952	KLHL34	Q8N239	644 aa		13.56	□□□□□ -0.24
PTPN12-216	ENST00000523952	BRD4	O60885	1362 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN12-216	ENST00000523952	PELP1	Q8IZL8	1130 aa	Known RBP	13.55	□□□□□ -0.24
PTPN12-216	ENST00000523952	MARCH10	Q8NA82	808 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN12-216	ENST00000523952	ARX	Q96QS3	562 aa		13.55	□□□□□ -0.24
PTPN12-216	ENST00000523952	WDR17	Q8IZU2	1322 aa		13.55	□□□□□ -0.24
PTPN12-216	ENST00000523952	TUBGCP6	Q96RT7	1819 aa		13.55	□□□□□ -0.24
PTPN12-216	ENST00000523952	EXOC5	O00471	708 aa		13.54	□□□□□ -0.24
PTPN12-216	ENST00000523952	PROM2	Q8N271	834 aa		13.54	□□□□□ -0.24
PTPN12-216	ENST00000523952	BCL9	O00512	1426 aa		13.53	□□□□□ -0.24
PTPN12-216	ENST00000523952	SOX12	O15370	315 aa		13.52	□□□□□ -0.25
PTPN12-216	ENST00000523952	CABP2	Q9NPB3	220 aa		13.52	□□□□□ -0.25
PTPN12-216	ENST00000523952	RAB3GAP2	Q9H2M9	1393 aa		13.52	□□□□□ -0.25
PTPN12-216	ENST00000523952	USP6	P35125	1406 aa		13.52	□□□□□ -0.25
PTPN12-216	ENST00000523952	CPSF1	Q10570	1443 aa	Known RBP	13.52	□□□□□ -0.25
PTPN12-216	ENST00000523952	TRPM1	Q7Z4N2	1603 aa		13.52	□□□□□ -0.25
PTPN12-216	ENST00000523952	PAPPA	Q13219	1627 aa		13.51	□□□□□ -0.25
PTPN12-216	ENST00000523952	POLD1	P28340	1107 aa		13.5	□□□□□ -0.25
PTPN12-216	ENST00000523952	KCNH5	Q8NCM2	988 aa		13.5	□□□□□ -0.25
PTPN12-216	ENST00000523952	CARD10	Q9BWT7	1032 aa		13.5	□□□□□ -0.25
PTPN12-216	ENST00000523952	COL24A1	Q17RW2	1714 aa		13.5	□□□□□ -0.25
PTPN12-216	ENST00000523952	TNS2	Q63HR2	1409 aa		13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	CCDC7	Q96M83	1385 aa		13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	MAP3K5	Q99683	1374 aa		13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	ACSBG1	Q96GR2	724 aa		13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	SHANK3	Q9BYB0	1731 aa		13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	ABCC6	O95255	1503 aa		13.49	□□□□□ -0.25
PTPN12-216	ENST00000523952	SGIP1	Q9BQI5	828 aa		13.48	□□□□□ -0.25
PTPN12-216	ENST00000523952	CABP1	Q9NZU7	370 aa		13.48	□□□□□ -0.25
PTPN12-216	ENST00000523952	AXIN2	Q9Y2T1	843 aa		13.48	□□□□□ -0.25
PTPN12-216	ENST00000523952	MON2	Q7Z3U7	1717 aa		13.47	□□□□□ -0.25
PTPN12-216	ENST00000523952	FAM208A	Q9UK61	1670 aa	Known RBP	13.46	□□□□□ -0.26
PTPN12-216	ENST00000523952	DOT1L	Q8TEK3	1739 aa		13.45	□□□□□ -0.26
PTPN12-216	ENST00000523952	LY75	O60449	1722 aa		13.44	□□□□□ -0.26
PTPN12-216	ENST00000523952	ARHGEF25	Q86VW2	580 aa		13.44	□□□□□ -0.26
PTPN12-216	ENST00000523952	SLC16A10	Q8TF71	515 aa		13.44	□□□□□ -0.26
PTPN12-216	ENST00000523952	EVC2	Q86UK5	1308 aa		13.43	□□□□□ -0.26
PTPN12-216	ENST00000523952	NBPF1	Q3BBV0	1214 aa		13.43	□□□□□ -0.26
PTPN12-216	ENST00000523952	ZNF692	Q9BU19	519 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN12-216	ENST00000523952	NLRP2	Q9NX02	1062 aa		13.43	□□□□□ -0.26
PTPN12-216	ENST00000523952	NFAT5	O94916	1531 aa		13.43	□□□□□ -0.26
PTPN12-216	ENST00000523952	ZNF827	Q17R98	1081 aa		13.42	□□□□□ -0.26
PTPN12-216	ENST00000523952	CEP350	Q5VT06	3117 aa		13.42	□□□□□ -0.26
PTPN12-216	ENST00000523952	TTC21B	Q7Z4L5	1316 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	TTC21A	Q8NDW8	1320 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	USP54	Q70EL1	1684 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	RGPD2	P0DJD1	1756 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	GRIN3B	O60391	1043 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	IL2RB	P14784	551 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	TFCP2L1	Q9NZI6	479 aa		13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	GOLGB1	Q14789	3259 aa	Known RBP	13.41	□□□□□ -0.26
PTPN12-216	ENST00000523952	SLC27A3	Q5K4L6	730 aa		13.39	□□□□□ -0.27
PTPN12-216	ENST00000523952	KTN1	Q86UP2	1357 aa	Known RBP	13.39	□□□□□ -0.27
PTPN12-216	ENST00000523952	C5	P01031	1676 aa		13.39	□□□□□ -0.27

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