RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 KLHL42Q9P2K6 505 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 RAD54L2Q9Y4B4 1467 aa8.06□□□□□ -1.12
SDC2-208ENST00000523877 KIF3CO14782 793 aa8.06□□□□□ -1.12
SDC2-208ENST00000523877 CCDC172P0C7W6 258 aa8.06□□□□□ -1.12
SDC2-208ENST00000523877 HMGN5P82970 282 aaKnown RBP8.06□□□□□ -1.12
SDC2-208ENST00000523877 CFAP53Q96M91 514 aa8.06□□□□□ -1.12
SDC2-208ENST00000523877 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
SDC2-208ENST00000523877 RANBP17Q9H2T7 1088 aaKnown RBP8.06□□□□□ -1.12
SDC2-208ENST00000523877 TRIM6-TRIM34B2RNG4 842 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
SDC2-208ENST00000523877 HMMRO75330 724 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 VDRP11473 427 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 FLT3P36888 993 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 PPP4CP60510 307 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 IGBP1P78318 339 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 C4orf46Q504U0 113 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 OGFOD1Q8N543 542 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 MNS1Q8NEH6 495 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 VTI1AQ96AJ9 217 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 TRIM34Q9BYJ4 488 aa8.05□□□□□ -1.12
SDC2-208ENST00000523877 PARNO95453 639 aaKnown RBP8.04□□□□□ -1.12
SDC2-208ENST00000523877 ZNF853P0CG23 659 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 CASQ1P31415 396 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 CLCN1P35523 988 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 KLHL10Q6JEL2 608 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 C11orf96Q7Z7L8 435 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 PDILTQ8N807 584 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 RBM46Q8TBY0 533 aaKnown RBP8.04□□□□□ -1.12
SDC2-208ENST00000523877 MRRFQ96E11 262 aaKnown RBP8.04□□□□□ -1.12
SDC2-208ENST00000523877 SCYL1Q96KG9 808 aa8.04□□□□□ -1.12
SDC2-208ENST00000523877 RSPH9Q9H1X1 276 aaPredicted RBP8.04□□□□□ -1.12
SDC2-208ENST00000523877 CWC25Q9NXE8 425 aaPredicted RBP8.04□□□□□ -1.12
SDC2-208ENST00000523877 KIAA1522Q9P206 1035 aaPredicted RBP8.04□□□□□ -1.12
SDC2-208ENST00000523877 CFAP65Q6ZU64 1925 aaKnown RBP8.03□□□□□ -1.12
SDC2-208ENST00000523877 CFAP69A5D8W1 941 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 PES1O00541 588 aaKnown RBP8.03□□□□□ -1.12
SDC2-208ENST00000523877 IPO7O95373 1038 aaKnown RBP8.03□□□□□ -1.12
SDC2-208ENST00000523877 NAP1L1P55209 391 aaKnown RBP8.03□□□□□ -1.12
SDC2-208ENST00000523877 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 ACRBPQ8NEB7 543 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 STK26Q9P289 416 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 NRBP1Q9UHY1 535 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 PDZRN3Q9UPQ7 1066 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 FAN1Q9Y2M0 1017 aa8.03□□□□□ -1.12
SDC2-208ENST00000523877 ZMYND10O75800 440 aa8.02□□□□□ -1.13
SDC2-208ENST00000523877 CT47B1P0C2W7 299 aaPredicted RBP8.02□□□□□ -1.13
SDC2-208ENST00000523877 CTR9Q6PD62 1173 aa8.02□□□□□ -1.13
SDC2-208ENST00000523877 MICALL2Q8IY33 904 aa8.02□□□□□ -1.13
SDC2-208ENST00000523877 CALR3Q96L12 384 aaKnown RBP8.02□□□□□ -1.13
SDC2-208ENST00000523877 PUF60Q9UHX1 559 aaKnown RBP8.02□□□□□ -1.13
SDC2-208ENST00000523877 KNSTRNQ9Y448 316 aa8.02□□□□□ -1.13
SDC2-208ENST00000523877 CTDP1Q9Y5B0 961 aaPredicted RBP8.02□□□□□ -1.13
SDC2-208ENST00000523877 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
SDC2-208ENST00000523877 hCG_2014768A0A024R1R8 64 aa8.01□□□□□ -1.13
SDC2-208ENST00000523877 SETSIPP0DME0 302 aa8.01□□□□□ -1.13
SDC2-208ENST00000523877 TERF1P54274 439 aa8.01□□□□□ -1.13
SDC2-208ENST00000523877 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
SDC2-208ENST00000523877 SND1Q7KZF4 910 aaKnown RBP eCLIP8.01□□□□□ -1.137e-11■■■□□ 17
SDC2-208ENST00000523877 C1orf131Q8NDD1 294 aaKnown RBP8.01□□□□□ -1.13
SDC2-208ENST00000523877 MS4A4AQ96JQ5 239 aa8.01□□□□□ -1.13
SDC2-208ENST00000523877 NUCKS1Q9H1E3 243 aaKnown RBP8.01□□□□□ -1.13
SDC2-208ENST00000523877 ATP1B4Q9UN42 357 aaPredicted RBP8.01□□□□□ -1.13
SDC2-208ENST00000523877 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.01□□□□□ -1.13
SDC2-208ENST00000523877 STK25O00506 426 aa8□□□□□ -1.13
SDC2-208ENST00000523877 VARS2Q5ST30 1063 aaKnown RBP8□□□□□ -1.13
SDC2-208ENST00000523877 C1QTNF12Q5T7M4 302 aa8□□□□□ -1.13
SDC2-208ENST00000523877 BORCS6Q96GS4 357 aa8□□□□□ -1.13
SDC2-208ENST00000523877 AGBL1Q96MI9 1066 aa8□□□□□ -1.13
SDC2-208ENST00000523877 NCAPGQ9BPX3 1015 aa8□□□□□ -1.13
SDC2-208ENST00000523877 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
SDC2-208ENST00000523877 KLHL33A6NCF5 533 aa7.99□□□□□ -1.13
SDC2-208ENST00000523877 IPO5O00410 1097 aaKnown RBP7.99□□□□□ -1.13
SDC2-208ENST00000523877 PPP1R15AO75807 674 aaPredicted RBP7.99□□□□□ -1.13
SDC2-208ENST00000523877 TPM3P06753 285 aa7.99□□□□□ -1.13
SDC2-208ENST00000523877 ZC3H12AQ5D1E8 599 aaKnown RBP7.99□□□□□ -1.13
SDC2-208ENST00000523877 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
SDC2-208ENST00000523877 ERCC4Q92889 916 aaPredicted RBP7.99□□□□□ -1.13
SDC2-208ENST00000523877 PAGR1Q9BTK6 254 aa7.99□□□□□ -1.13
SDC2-208ENST00000523877 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
SDC2-208ENST00000523877 CHPF2Q9P2E5 772 aa7.99□□□□□ -1.13
SDC2-208ENST00000523877 SBNO2Q9Y2G9 1366 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 THOC2Q8NI27 1593 aaKnown RBP7.98□□□□□ -1.13
SDC2-208ENST00000523877 PAX7P23759 505 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 PSMD2Q13200 908 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 PCGF5Q86SE9 256 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 ANKRD13BQ86YJ7 626 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 DONSONQ9NYP3 566 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 ISY1Q9ULR0 285 aaKnown RBP7.98□□□□□ -1.13
SDC2-208ENST00000523877 PHF8Q9UPP1 1060 aa7.98□□□□□ -1.13
SDC2-208ENST00000523877 CCP110O43303 1012 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 HSP90AB1P08238 724 aaKnown RBP7.97□□□□□ -1.13
SDC2-208ENST00000523877 ABCD1P33897 745 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 ZC3H6P61129 1189 aaKnown RBP7.97□□□□□ -1.13
SDC2-208ENST00000523877 BIRC2Q13490 618 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 GPR153Q6NV75 609 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 PROSER2Q86WR7 435 aaPredicted RBP7.97□□□□□ -1.13
SDC2-208ENST00000523877 RSPH1Q8WYR4 309 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 GPATCH3Q96I76 525 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 AK7Q96M32 723 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms