RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 A0A0G2JS52 829 aa13.32□□□□□ -0.28
PABPC1-222ENST00000523555 EVA1CP58658 441 aa13.32□□□□□ -0.28
PABPC1-222ENST00000523555 MYT1Q01538 1121 aa13.32□□□□□ -0.28
PABPC1-222ENST00000523555 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
PABPC1-222ENST00000523555 KCNH5Q8NCM2 988 aa13.32□□□□□ -0.28
PABPC1-222ENST00000523555 PARP4Q9UKK3 1724 aaKnown RBP13.32□□□□□ -0.28
PABPC1-222ENST00000523555 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
PABPC1-222ENST00000523555 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
PABPC1-222ENST00000523555 FBLN1P23142 703 aa13.31□□□□□ -0.28
PABPC1-222ENST00000523555 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
PABPC1-222ENST00000523555 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-222ENST00000523555 EIF4G2P78344 907 aaKnown RBP eCLIP13.3□□□□□ -0.28
PABPC1-222ENST00000523555 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
PABPC1-222ENST00000523555 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
PABPC1-222ENST00000523555 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
PABPC1-222ENST00000523555 CRB1P82279 1406 aa13.3□□□□□ -0.28
PABPC1-222ENST00000523555 ABCC6O95255 1503 aa13.29□□□□□ -0.28
PABPC1-222ENST00000523555 FYB1O15117 783 aa13.28□□□□□ -0.28
PABPC1-222ENST00000523555 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
PABPC1-222ENST00000523555 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
PABPC1-222ENST00000523555 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
PABPC1-222ENST00000523555 PEAK1Q9H792 1746 aa13.27□□□□□ -0.28
PABPC1-222ENST00000523555 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 TCP11L2Q8N4U5 519 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 WDR17Q8IZU2 1322 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 SBF2Q86WG5 1849 aa13.27□□□□□ -0.29
PABPC1-222ENST00000523555 TOM1L2Q6ZVM7 507 aa13.26□□□□□ -0.29
PABPC1-222ENST00000523555 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
PABPC1-222ENST00000523555 COG3Q96JB2 828 aa13.25□□□□□ -0.29
PABPC1-222ENST00000523555 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
PABPC1-222ENST00000523555 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
PABPC1-222ENST00000523555 ERBB3P21860 1342 aa13.24□□□□□ -0.29
PABPC1-222ENST00000523555 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
PABPC1-222ENST00000523555 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
PABPC1-222ENST00000523555 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
PABPC1-222ENST00000523555 FAM208AQ9UK61 1670 aaKnown RBP13.24□□□□□ -0.29
PABPC1-222ENST00000523555 RRS1Q15050 365 aaKnown RBP13.23□□□□□ -0.29
PABPC1-222ENST00000523555 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
PABPC1-222ENST00000523555 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
PABPC1-222ENST00000523555 HOXC9P31274 260 aa13.21□□□□□ -0.29
PABPC1-222ENST00000523555 IP6K1Q92551 441 aa13.21□□□□□ -0.29
PABPC1-222ENST00000523555 CARD10Q9BWT7 1032 aa13.21□□□□□ -0.29
PABPC1-222ENST00000523555 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.3
PABPC1-222ENST00000523555 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
PABPC1-222ENST00000523555 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
PABPC1-222ENST00000523555 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
PABPC1-222ENST00000523555 PANK3Q9H999 370 aa13.19□□□□□ -0.3
PABPC1-222ENST00000523555 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
PABPC1-222ENST00000523555 TRIM37O94972 964 aa13.18□□□□□ -0.3
PABPC1-222ENST00000523555 PDE3BQ13370 1112 aa13.18□□□□□ -0.3
PABPC1-222ENST00000523555 NLRP2Q9NX02 1062 aa13.18□□□□□ -0.3
PABPC1-222ENST00000523555 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
PABPC1-222ENST00000523555 AMPHP49418 695 aa13.17□□□□□ -0.3
PABPC1-222ENST00000523555 DDB1Q16531 1140 aa13.17□□□□□ -0.3
PABPC1-222ENST00000523555 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
PABPC1-222ENST00000523555 EMILIN1Q9Y6C2 1016 aa13.17□□□□□ -0.3
PABPC1-222ENST00000523555 RREB1Q92766 1687 aa13.17□□□□□ -0.3
PABPC1-222ENST00000523555 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
PABPC1-222ENST00000523555 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
PABPC1-222ENST00000523555 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-222ENST00000523555 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
PABPC1-222ENST00000523555 FAM196AQ6ZSG2 479 aa13.16□□□□□ -0.3
PABPC1-222ENST00000523555 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
PABPC1-222ENST00000523555 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
PABPC1-222ENST00000523555 CGNL1Q0VF96 1302 aa13.15□□□□□ -0.3
PABPC1-222ENST00000523555 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
PABPC1-222ENST00000523555 KAT6BQ8WYB5 2073 aa13.14□□□□□ -0.31
PABPC1-222ENST00000523555 MEGF6O75095 1541 aa13.14□□□□□ -0.31
PABPC1-222ENST00000523555 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
PABPC1-222ENST00000523555 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 NHSQ6T4R5 1651 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 INSRP06213 1382 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 FLT4P35916 1363 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 IL2RBP14784 551 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-222ENST00000523555 BAG6P46379 1132 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
PABPC1-222ENST00000523555 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
PABPC1-222ENST00000523555 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-222ENST00000523555 SRCAPQ6ZRS2 3230 aa13.12□□□□□ -0.31
PABPC1-222ENST00000523555 EXOC5O00471 708 aa13.12□□□□□ -0.31
PABPC1-222ENST00000523555 DOT1LQ8TEK3 1739 aa13.12□□□□□ -0.31
PABPC1-222ENST00000523555 BTAF1O14981 1849 aa13.11□□□□□ -0.31
PABPC1-222ENST00000523555 APBA3O96018 575 aa13.11□□□□□ -0.31
PABPC1-222ENST00000523555 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
PABPC1-222ENST00000523555 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
PABPC1-222ENST00000523555 RGPD3A6NKT7 1758 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-222ENST00000523555 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
PABPC1-222ENST00000523555 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
PABPC1-222ENST00000523555 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-222ENST00000523555 BCL9O00512 1426 aa13.1□□□□□ -0.31
PABPC1-222ENST00000523555 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-222ENST00000523555 KCNQ2O43526 872 aa13.09□□□□□ -0.31
PABPC1-222ENST00000523555 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-222ENST00000523555 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
PABPC1-222ENST00000523555 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms