RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 MBIPQ9NS73 344 aa22.48■■□□□ 1.19
IKBKB-228ENST00000523517 RIMBP3CA6NJZ7 1639 aa22.48■■□□□ 1.19
IKBKB-228ENST00000523517 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
IKBKB-228ENST00000523517 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
IKBKB-228ENST00000523517 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
IKBKB-228ENST00000523517 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
IKBKB-228ENST00000523517 METP08581 1390 aa22.47■■□□□ 1.19
IKBKB-228ENST00000523517 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.192e-7■■■■■ 44.1
IKBKB-228ENST00000523517 GCC1Q96CN9 775 aa22.46■■□□□ 1.19
IKBKB-228ENST00000523517 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
IKBKB-228ENST00000523517 LMOD3Q0VAK6 560 aa22.46■■□□□ 1.19
IKBKB-228ENST00000523517 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
IKBKB-228ENST00000523517 COG3Q96JB2 828 aa22.46■■□□□ 1.19
IKBKB-228ENST00000523517 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
IKBKB-228ENST00000523517 RBM25P49756 843 aaKnown RBP22.45■■□□□ 1.18
IKBKB-228ENST00000523517 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
IKBKB-228ENST00000523517 ABCC4O15439 1325 aa22.44■■□□□ 1.18
IKBKB-228ENST00000523517 MLECQ14165 292 aa22.44■■□□□ 1.18
IKBKB-228ENST00000523517 BMP2KLQ5H9B9 411 aa22.44■■□□□ 1.18
IKBKB-228ENST00000523517 CFAP44Q96MT7 982 aa22.44■■□□□ 1.18
IKBKB-228ENST00000523517 CCDC61Q9Y6R9 512 aa22.44■■□□□ 1.18
IKBKB-228ENST00000523517 TWISTNBQ3B726 338 aaPredicted RBP22.43■■□□□ 1.18
IKBKB-228ENST00000523517 ANKRD45Q5TZF3 282 aa22.43■■□□□ 1.18
IKBKB-228ENST00000523517 HSCBQ8IWL3 235 aa22.43■■□□□ 1.18
IKBKB-228ENST00000523517 C1orf115Q9H7X2 142 aa22.43■■□□□ 1.18
IKBKB-228ENST00000523517 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
IKBKB-228ENST00000523517 NCKAP5LQ9HCH0 1330 aa22.42■■□□□ 1.18
IKBKB-228ENST00000523517 RRS1Q15050 365 aaKnown RBP22.42■■□□□ 1.18
IKBKB-228ENST00000523517 C8orf58Q8NAV2 365 aa22.42■■□□□ 1.18
IKBKB-228ENST00000523517 MCM4P33991 863 aa22.41■■□□□ 1.18
IKBKB-228ENST00000523517 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
IKBKB-228ENST00000523517 CPS1P31327 1500 aa22.41■■□□□ 1.18
IKBKB-228ENST00000523517 SIRT2Q8IXJ6 389 aa22.4■■□□□ 1.18
IKBKB-228ENST00000523517 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
IKBKB-228ENST00000523517 MAP2P11137 1827 aaKnown RBP22.4■■□□□ 1.18
IKBKB-228ENST00000523517 API5Q9BZZ5 524 aaKnown RBP22.39■■□□□ 1.18
IKBKB-228ENST00000523517 SNX21Q969T3 373 aa22.39■■□□□ 1.17
IKBKB-228ENST00000523517 FAM83GA6ND36 823 aa22.38■■□□□ 1.17
IKBKB-228ENST00000523517 ZNF692Q9BU19 519 aaPredicted RBP22.38■■□□□ 1.17
IKBKB-228ENST00000523517 TECPR2O15040 1411 aa22.37■■□□□ 1.17
IKBKB-228ENST00000523517 L1TD1Q5T7N2 865 aaKnown RBP22.36■■□□□ 1.17
IKBKB-228ENST00000523517 NCOA3Q9Y6Q9 1424 aa22.35■■□□□ 1.17
IKBKB-228ENST00000523517 HDGFP51858 240 aaKnown RBP22.35■■□□□ 1.17
IKBKB-228ENST00000523517 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
IKBKB-228ENST00000523517 PRR36Q9H6K5 1346 aa22.34■■□□□ 1.17
IKBKB-228ENST00000523517 KIF24Q5T7B8 1368 aa22.34■■□□□ 1.17
IKBKB-228ENST00000523517 DDIT3P35638 169 aa22.34■■□□□ 1.17
IKBKB-228ENST00000523517 TBC1D9Q6ZT07 1266 aa22.32■■□□□ 1.16
IKBKB-228ENST00000523517 ESF1Q9H501 851 aaKnown RBP22.32■■□□□ 1.16
IKBKB-228ENST00000523517 KIF2CQ99661 725 aa22.32■■□□□ 1.16
IKBKB-228ENST00000523517 MON2Q7Z3U7 1717 aa22.32■■□□□ 1.16
IKBKB-228ENST00000523517 EIF4A2Q14240 407 aaKnown RBP22.31■■□□□ 1.16
IKBKB-228ENST00000523517 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
IKBKB-228ENST00000523517 TRAK2O60296 914 aa22.3■■□□□ 1.16
IKBKB-228ENST00000523517 SULT6B1Q6IMI4 303 aa22.3■■□□□ 1.16
IKBKB-228ENST00000523517 TSPOAP1O95153 1857 aa22.29■■□□□ 1.16
IKBKB-228ENST00000523517 C3P01024 1663 aa22.29■■□□□ 1.16
IKBKB-228ENST00000523517 INTS3Q68E01 1043 aaKnown RBP22.29■■□□□ 1.16
IKBKB-228ENST00000523517 KNDC1Q76NI1 1749 aa22.29■■□□□ 1.16
IKBKB-228ENST00000523517 FAM43AQ8N2R8 423 aa22.28■■□□□ 1.16
IKBKB-228ENST00000523517 TTC21BQ7Z4L5 1316 aa22.28■■□□□ 1.16
IKBKB-228ENST00000523517 HSP90AB1P08238 724 aaKnown RBP22.28■■□□□ 1.16
IKBKB-228ENST00000523517 ROBO2Q9HCK4 1378 aa22.28■■□□□ 1.16
IKBKB-228ENST00000523517 FSD2A1L4K1 749 aa22.27■■□□□ 1.16
IKBKB-228ENST00000523517 DCTPP1Q9H773 170 aa22.27■■□□□ 1.16
IKBKB-228ENST00000523517 GOLGA6L3A6NEY3 463 aa22.27■■□□□ 1.16
IKBKB-228ENST00000523517 DDX11L8A8MPP1 907 aa22.27■■□□□ 1.16
IKBKB-228ENST00000523517 CHL1O00533 1208 aa22.27■■□□□ 1.16
IKBKB-228ENST00000523517 CDC45O75419 566 aa22.27■■□□□ 1.16
IKBKB-228ENST00000523517 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
IKBKB-228ENST00000523517 CIZ1Q9ULV3 898 aaPredicted RBP22.27■■□□□ 1.16
IKBKB-228ENST00000523517 GZF1Q9H116 711 aaPredicted RBP22.26■■□□□ 1.15
IKBKB-228ENST00000523517 NRKQ7Z2Y5 1582 aa22.26■■□□□ 1.15
IKBKB-228ENST00000523517 TNRQ92752 1358 aa22.26■■□□□ 1.15
IKBKB-228ENST00000523517 TMEM2Q9UHN6 1383 aa22.25■■□□□ 1.15
IKBKB-228ENST00000523517 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
IKBKB-228ENST00000523517 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
IKBKB-228ENST00000523517 PLEKHM2Q8IWE5 1019 aa22.25■■□□□ 1.15
IKBKB-228ENST00000523517 GSPT1P15170 499 aaKnown RBP22.24■■□□□ 1.15
IKBKB-228ENST00000523517 DLG5Q8TDM6 1919 aa22.24■■□□□ 1.15
IKBKB-228ENST00000523517 ACEP12821 1306 aa22.24■■□□□ 1.15
IKBKB-228ENST00000523517 PLEKHG3A1L390 1219 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 MCM10Q7L590 875 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 ANKRD44Q8N8A2 993 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 ANO8Q9HCE9 1232 aaPredicted RBP22.23■■□□□ 1.15
IKBKB-228ENST00000523517 KIAA0232Q92628 1395 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 CD2BP2O95400 341 aaKnown RBP22.23■■□□□ 1.15
IKBKB-228ENST00000523517 XRCC6P12956 609 aaKnown RBP eCLIP22.23■■□□□ 1.15
IKBKB-228ENST00000523517 OVOS2A0A0J9YW53 1432 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 RGS12O14924 1447 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 OVOS2Q6IE36 1432 aa22.23■■□□□ 1.15
IKBKB-228ENST00000523517 TNPO1Q92973 898 aaKnown RBP22.22■■□□□ 1.15
IKBKB-228ENST00000523517 ITSN1Q15811 1721 aa22.22■■□□□ 1.15
IKBKB-228ENST00000523517 RPAP2Q8IXW5 612 aaPredicted RBP22.21■■□□□ 1.15
IKBKB-228ENST00000523517 K7ELQ4 463 aaPredicted RBP22.21■■□□□ 1.15
IKBKB-228ENST00000523517 EIF5BO60841 1220 aaKnown RBP22.21■■□□□ 1.15
IKBKB-228ENST00000523517 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
IKBKB-228ENST00000523517 ADAMTS13Q76LX8 1427 aa22.21■■□□□ 1.15
IKBKB-228ENST00000523517 RAB3GAP1Q15042 981 aa22.2■■□□□ 1.15
IKBKB-228ENST00000523517 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms