RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 NLRP1Q9C000 1473 aa10.92□□□□□ -0.66
CSMD1-212ENST00000523387 SYNMO15061 1565 aa10.92□□□□□ -0.66
CSMD1-212ENST00000523387 FCHSD2O94868 740 aa10.92□□□□□ -0.66
CSMD1-212ENST00000523387 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSMD1-212ENST00000523387 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-212ENST00000523387 UPF3BQ9BZI7 483 aaKnown RBP10.92□□□□□ -0.66
CSMD1-212ENST00000523387 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
CSMD1-212ENST00000523387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSMD1-212ENST00000523387 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 STK31Q9BXU1 1019 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 WDR33Q9C0J8 1336 aaKnown RBP10.91□□□□□ -0.66
CSMD1-212ENST00000523387 ABCC10Q5T3U5 1492 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 SDSP20132 328 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 RTF1Q92541 710 aaKnown RBP10.91□□□□□ -0.66
CSMD1-212ENST00000523387 TTC12Q9H892 705 aaPredicted RBP10.91□□□□□ -0.66
CSMD1-212ENST00000523387 TMEM63CQ9P1W3 806 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 SMC3Q9UQE7 1217 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
CSMD1-212ENST00000523387 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
CSMD1-212ENST00000523387 DUOX2Q9NRD8 1548 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 VPS37CA5D8V6 355 aaPredicted RBP10.9□□□□□ -0.66
CSMD1-212ENST00000523387 NOLC1Q14978 699 aaKnown RBP eCLIP10.9□□□□□ -0.66
CSMD1-212ENST00000523387 NFE2L2Q16236 605 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 TSC1Q92574 1164 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 PRIMPOLQ96LW4 560 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 USP26Q9BXU7 913 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 ADCY5O95622 1261 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 TMX3Q96JJ7 454 aa10.9□□□□□ -0.66
CSMD1-212ENST00000523387 TARBP1Q13395 1621 aaKnown RBP10.9□□□□□ -0.66
CSMD1-212ENST00000523387 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
CSMD1-212ENST00000523387 RPAP2Q8IXW5 612 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-212ENST00000523387 LETM1O95202 739 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-212ENST00000523387 HCLS1P14317 486 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-212ENST00000523387 TSPYL6Q8N831 410 aa10.89□□□□□ -0.67
CSMD1-212ENST00000523387 NOS1P29475 1434 aa10.89□□□□□ -0.67
CSMD1-212ENST00000523387 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
CSMD1-212ENST00000523387 GPT2Q8TD30 523 aa10.88□□□□□ -0.67
CSMD1-212ENST00000523387 IBTKQ9P2D0 1353 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-212ENST00000523387 TPM3P06753 285 aa10.88□□□□□ -0.67
CSMD1-212ENST00000523387 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
CSMD1-212ENST00000523387 ARHGAP45Q92619 1136 aa10.88□□□□□ -0.67
CSMD1-212ENST00000523387 NSD2O96028 1365 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 DCTN1Q14203 1278 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 OTUD7AQ8TE49 926 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-212ENST00000523387 PTPRTO14522 1441 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 VAMP4O75379 141 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 C17orf53Q8N3J3 647 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-212ENST00000523387 EXOC6BQ9Y2D4 811 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 GSPT1P15170 499 aaKnown RBP10.87□□□□□ -0.67
CSMD1-212ENST00000523387 MBIPQ9NS73 344 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 CABP1Q9NZU7 370 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 CROCC2H7BZ55 1655 aa10.87□□□□□ -0.67
CSMD1-212ENST00000523387 FBLN1P23142 703 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 TSHZ3Q63HK5 1081 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 MYRIPQ8NFW9 859 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 PRAM1Q96QH2 718 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 KIF2CQ99661 725 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 IGSF3O75054 1194 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 FGD1P98174 961 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 PHF23Q9BUL5 403 aaPredicted RBP10.86□□□□□ -0.67
CSMD1-212ENST00000523387 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
CSMD1-212ENST00000523387 KDM5AP29375 1690 aaKnown RBP10.86□□□□□ -0.67
CSMD1-212ENST00000523387 DDIT3P35638 169 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 COG3Q96JB2 828 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 TRIM5Q9C035 493 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 DCTPP1Q9H773 170 aa10.86□□□□□ -0.67
CSMD1-212ENST00000523387 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.86□□□□□ -0.67
CSMD1-212ENST00000523387 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 ANKRD36BQ8N2N9 1353 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 NRDCO43847 1150 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 SLC4A2P04920 1241 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 UVSSAQ2YD98 709 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 USP48Q86UV5 1035 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
CSMD1-212ENST00000523387 FKBP5Q13451 457 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-212ENST00000523387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
CSMD1-212ENST00000523387 GOLGA6L19H0YKK7 550 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 TPD52L1Q16890 204 aaPredicted RBP10.84□□□□□ -0.67
CSMD1-212ENST00000523387 ATAD2Q6PL18 1390 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 FYB1O15117 783 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 ADCY10Q96PN6 1610 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 C8orf58Q8NAV2 365 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
CSMD1-212ENST00000523387 ANKRD44Q8N8A2 993 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 CCDC112Q8NEF3 446 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 LRRCC1Q9C099 1032 aa10.84□□□□□ -0.67
CSMD1-212ENST00000523387 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 TRAPPC8Q9Y2L5 1435 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
CSMD1-212ENST00000523387 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 PIBF1Q8WXW3 757 aa10.83□□□□□ -0.68
CSMD1-212ENST00000523387 PDLIM2Q96JY6 352 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms