RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 MAP3K19Q56UN5 1328 aa8.49□□□□□ -1.05
BRD9-219ENST00000523139 NWD2Q9ULI1 1742 aa8.49□□□□□ -1.05
BRD9-219ENST00000523139 NCAPD2Q15021 1401 aa8.48□□□□□ -1.05
BRD9-219ENST00000523139 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
BRD9-219ENST00000523139 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
BRD9-219ENST00000523139 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
BRD9-219ENST00000523139 ZRANB1Q9UGI0 708 aa8.48□□□□□ -1.05
BRD9-219ENST00000523139 PIP4K2BP78356 416 aa8.47□□□□□ -1.05
BRD9-219ENST00000523139 KDRP35968 1356 aa8.47□□□□□ -1.05
BRD9-219ENST00000523139 DIAPH1O60610 1272 aaKnown RBP8.46□□□□□ -1.06
BRD9-219ENST00000523139 HOXC9P31274 260 aa8.46□□□□□ -1.06
BRD9-219ENST00000523139 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
BRD9-219ENST00000523139 MRS2Q9HD23 443 aa8.46□□□□□ -1.06
BRD9-219ENST00000523139 NUDCQ9Y266 331 aa8.46□□□□□ -1.06
BRD9-219ENST00000523139 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
BRD9-219ENST00000523139 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
BRD9-219ENST00000523139 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
BRD9-219ENST00000523139 IL13P35225 146 aa8.45□□□□□ -1.06
BRD9-219ENST00000523139 PNNQ9H307 717 aaKnown RBP8.45□□□□□ -1.06
BRD9-219ENST00000523139 SLIT2O94813 1529 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 FCHSD2O94868 740 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 AMPHP49418 695 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
BRD9-219ENST00000523139 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 LMOD2Q6P5Q4 547 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 ERBB3P21860 1342 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 KIAA0232Q92628 1395 aa8.44□□□□□ -1.06
BRD9-219ENST00000523139 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
BRD9-219ENST00000523139 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
BRD9-219ENST00000523139 RGPD5Q99666 1765 aa8.43□□□□□ -1.06
BRD9-219ENST00000523139 HSPA1LP34931 641 aa8.43□□□□□ -1.06
BRD9-219ENST00000523139 TNNT2P45379 298 aaPredicted RBP8.43□□□□□ -1.06
BRD9-219ENST00000523139 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
BRD9-219ENST00000523139 HSP90AB2PQ58FF8 381 aa8.43□□□□□ -1.06
BRD9-219ENST00000523139 COL5A2P05997 1499 aaPredicted RBP8.43□□□□□ -1.06
BRD9-219ENST00000523139 EIF4A2Q14240 407 aaKnown RBP8.42□□□□□ -1.06
BRD9-219ENST00000523139 FNBP4Q8N3X1 1017 aaPredicted RBP8.42□□□□□ -1.06
BRD9-219ENST00000523139 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
BRD9-219ENST00000523139 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
BRD9-219ENST00000523139 WDR17Q8IZU2 1322 aa8.41□□□□□ -1.06
BRD9-219ENST00000523139 FBLN1P23142 703 aa8.41□□□□□ -1.06
BRD9-219ENST00000523139 HAP1P54257 671 aaPredicted RBP8.41□□□□□ -1.06
BRD9-219ENST00000523139 ZC3H6P61129 1189 aaKnown RBP8.41□□□□□ -1.06
BRD9-219ENST00000523139 WDR43Q15061 677 aaKnown RBP eCLIP8.41□□□□□ -1.06
BRD9-219ENST00000523139 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
BRD9-219ENST00000523139 CRB1P82279 1406 aa8.4□□□□□ -1.06
BRD9-219ENST00000523139 FAM83GA6ND36 823 aa8.4□□□□□ -1.06
BRD9-219ENST00000523139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.06
BRD9-219ENST00000523139 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
BRD9-219ENST00000523139 LRP6O75581 1613 aa8.4□□□□□ -1.07
BRD9-219ENST00000523139 PPM1GO15355 546 aaPredicted RBP8.39□□□□□ -1.07
BRD9-219ENST00000523139 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 ANKRD24Q8TF21 1146 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 RUNDC1Q96C34 613 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 PLEKHF1Q96S99 279 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 EYA1Q99502 592 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
BRD9-219ENST00000523139 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
BRD9-219ENST00000523139 PARP4Q9UKK3 1724 aaKnown RBP8.39□□□□□ -1.07
BRD9-219ENST00000523139 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
BRD9-219ENST00000523139 WNK3Q9BYP7 1800 aa8.38□□□□□ -1.07
BRD9-219ENST00000523139 RGPD2P0DJD1 1756 aa8.38□□□□□ -1.07
BRD9-219ENST00000523139 PKD1L3Q7Z443 1732 aa8.38□□□□□ -1.07
BRD9-219ENST00000523139 SLC4A2P04920 1241 aa8.38□□□□□ -1.07
BRD9-219ENST00000523139 U2AF1L5P0DN76 240 aaPredicted RBP8.38□□□□□ -1.07
BRD9-219ENST00000523139 U2AF1Q01081 240 aaKnown RBP eCLIP8.38□□□□□ -1.07
BRD9-219ENST00000523139 CNGB1Q14028 1251 aaPredicted RBP8.38□□□□□ -1.07
BRD9-219ENST00000523139 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
BRD9-219ENST00000523139 SOX12O15370 315 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 AMOTQ4VCS5 1084 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 NBPF6Q5VWK0 638 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 UNC5CLQ8IV45 518 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 NBPF4Q96M43 638 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 DISP2A7MBM2 1401 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
BRD9-219ENST00000523139 U2SURPO15042 1029 aaKnown RBP8.36□□□□□ -1.07
BRD9-219ENST00000523139 ZBTB22O15209 634 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 HTATSF1O43719 755 aaKnown RBP8.36□□□□□ -1.07
BRD9-219ENST00000523139 NEFMP07197 916 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 CHRNA2Q15822 529 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 VPS72Q15906 364 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 FAM9BQ8IZU0 186 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 BTG4Q9NY30 223 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 OVOS2A0A0G2JMS6 1433 aa8.36□□□□□ -1.07
BRD9-219ENST00000523139 ZBED9Q6R2W3 1325 aa8.35□□□□□ -1.07
BRD9-219ENST00000523139 DCAF8L1A6NGE4 600 aa8.35□□□□□ -1.07
BRD9-219ENST00000523139 SULT6B1Q6IMI4 303 aa8.35□□□□□ -1.07
BRD9-219ENST00000523139 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 SPATA31A5Q5VU36 1347 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 SPATA31A7Q8IWB4 1347 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 ZNF521Q96K83 1311 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
BRD9-219ENST00000523139 PRKAR2BP31323 418 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 EVA1CP58658 441 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
BRD9-219ENST00000523139 NGLY1Q96IV0 654 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms