RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 RREB1Q92766 1687 aa7.22□□□□□ -1.25
CDKL3-209ENST00000523054 NUP188Q5SRE5 1749 aa7.22□□□□□ -1.25
CDKL3-209ENST00000523054 WDR90Q96KV7 1748 aa7.22□□□□□ -1.25
CDKL3-209ENST00000523054 GPR162Q16538 588 aa7.22□□□□□ -1.25
CDKL3-209ENST00000523054 SYT17Q9BSW7 474 aa7.22□□□□□ -1.25
CDKL3-209ENST00000523054 ATP10DQ9P241 1426 aa7.22□□□□□ -1.25
CDKL3-209ENST00000523054 SUPT5HO00267 1087 aaKnown RBP7.21□□□□□ -1.25
CDKL3-209ENST00000523054 CAMKK2Q96RR4 588 aa7.21□□□□□ -1.25
CDKL3-209ENST00000523054 KCNK17Q96T54 332 aa7.21□□□□□ -1.25
CDKL3-209ENST00000523054 THSD4Q6ZMP0 1018 aa7.2□□□□□ -1.26
CDKL3-209ENST00000523054 FHDC1Q9C0D6 1143 aaPredicted RBP7.2□□□□□ -1.26
CDKL3-209ENST00000523054 C19orf44Q9H6X5 657 aa7.2□□□□□ -1.26
CDKL3-209ENST00000523054 SLC26A8Q96RN1 970 aa7.2□□□□□ -1.26
CDKL3-209ENST00000523054 SLC4A5Q9BY07 1137 aa7.2□□□□□ -1.26
CDKL3-209ENST00000523054 PPP1R15AO75807 674 aaPredicted RBP7.19□□□□□ -1.26
CDKL3-209ENST00000523054 WASHC2CQ9Y4E1 1318 aa7.19□□□□□ -1.26
CDKL3-209ENST00000523054 INO80Q9ULG1 1556 aaPredicted RBP7.19□□□□□ -1.26
CDKL3-209ENST00000523054 CHD2O14647 1828 aaKnown RBP7.19□□□□□ -1.26
CDKL3-209ENST00000523054 TET3O43151 1660 aa7.18□□□□□ -1.26
CDKL3-209ENST00000523054 UNC5CLQ8IV45 518 aa7.18□□□□□ -1.26
CDKL3-209ENST00000523054 PREX2Q70Z35 1606 aa7.18□□□□□ -1.26
CDKL3-209ENST00000523054 FOXK1P85037 733 aa7.18□□□□□ -1.26
CDKL3-209ENST00000523054 COL22A1Q8NFW1 1626 aaPredicted RBP7.17□□□□□ -1.26
CDKL3-209ENST00000523054 BHMG1C9JSJ3 638 aaPredicted RBP7.17□□□□□ -1.26
CDKL3-209ENST00000523054 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
CDKL3-209ENST00000523054 CASZ1Q86V15 1759 aa7.16□□□□□ -1.26
CDKL3-209ENST00000523054 TBC1D12O60347 775 aa7.16□□□□□ -1.26
CDKL3-209ENST00000523054 ONECUT3O60422 494 aaPredicted RBP7.16□□□□□ -1.26
CDKL3-209ENST00000523054 HSPA1AP0DMV8 641 aaKnown RBP7.16□□□□□ -1.26
CDKL3-209ENST00000523054 HSPA1BP0DMV9 641 aaKnown RBP7.16□□□□□ -1.26
CDKL3-209ENST00000523054 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
CDKL3-209ENST00000523054 USP19O94966 1318 aa7.16□□□□□ -1.26
CDKL3-209ENST00000523054 ERVK-7P63135 1459 aa7.15□□□□□ -1.26
CDKL3-209ENST00000523054 PLPP6Q8IY26 295 aa7.15□□□□□ -1.27
CDKL3-209ENST00000523054 DDX17Q92841 729 aaKnown RBP7.15□□□□□ -1.27
CDKL3-209ENST00000523054 TMEM2Q9UHN6 1383 aa7.15□□□□□ -1.27
CDKL3-209ENST00000523054 DCCP43146 1447 aa7.15□□□□□ -1.27
CDKL3-209ENST00000523054 FMN1Q68DA7 1419 aa7.15□□□□□ -1.27
CDKL3-209ENST00000523054 Q6ZNB5 142 aa7.14□□□□□ -1.27
CDKL3-209ENST00000523054 WNT2BQ93097 391 aa7.14□□□□□ -1.27
CDKL3-209ENST00000523054 BCL2L12Q9HB09 334 aa7.14□□□□□ -1.27
CDKL3-209ENST00000523054 MYOM2P54296 1465 aa7.13□□□□□ -1.27
CDKL3-209ENST00000523054 APBA3O96018 575 aa7.13□□□□□ -1.27
CDKL3-209ENST00000523054 ZNF526Q8TF50 670 aaPredicted RBP7.13□□□□□ -1.27
CDKL3-209ENST00000523054 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
CDKL3-209ENST00000523054 SLIT2O94813 1529 aa7.13□□□□□ -1.27
CDKL3-209ENST00000523054 CLIP1P30622 1438 aa7.13□□□□□ -1.27
CDKL3-209ENST00000523054 MAP3K5Q99683 1374 aa7.13□□□□□ -1.27
CDKL3-209ENST00000523054 SYCP2Q9BX26 1530 aa7.12□□□□□ -1.27
CDKL3-209ENST00000523054 MST1RQ04912 1400 aa7.12□□□□□ -1.27
CDKL3-209ENST00000523054 GOLGA8CPA6NN73 597 aa7.12□□□□□ -1.27
CDKL3-209ENST00000523054 ZBTB7AO95365 584 aa7.12□□□□□ -1.27
CDKL3-209ENST00000523054 RGS19P49795 217 aa7.12□□□□□ -1.27
CDKL3-209ENST00000523054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDKL3-209ENST00000523054 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
CDKL3-209ENST00000523054 TMEM131LA2VDJ0 1609 aa7.11□□□□□ -1.27
CDKL3-209ENST00000523054 KIF3BO15066 747 aa7.11□□□□□ -1.27
CDKL3-209ENST00000523054 ITGBL1O95965 494 aaPredicted RBP7.11□□□□□ -1.27
CDKL3-209ENST00000523054 VPS72Q15906 364 aa7.11□□□□□ -1.27
CDKL3-209ENST00000523054 GPHNQ9NQX3 736 aaPredicted RBP7.11□□□□□ -1.27
CDKL3-209ENST00000523054 LAMC1P11047 1609 aa7.11□□□□□ -1.27
CDKL3-209ENST00000523054 LMOD2Q6P5Q4 547 aa7.1□□□□□ -1.27
CDKL3-209ENST00000523054 MRPL50Q8N5N7 158 aaKnown RBP7.1□□□□□ -1.27
CDKL3-209ENST00000523054 ZBED2Q9BTP6 218 aa7.1□□□□□ -1.27
CDKL3-209ENST00000523054 CRISPLD2Q9H0B8 497 aa7.1□□□□□ -1.27
CDKL3-209ENST00000523054 RPRD2Q5VT52 1461 aaKnown RBP7.1□□□□□ -1.27
CDKL3-209ENST00000523054 CROCC2H7BZ55 1655 aa7.1□□□□□ -1.27
CDKL3-209ENST00000523054 TROQ12816 1431 aaPredicted RBP7.1□□□□□ -1.27
CDKL3-209ENST00000523054 TRIM37O94972 964 aa7.1□□□□□ -1.27
CDKL3-209ENST00000523054 PDE4DIPQ5VU43 2346 aa7.09□□□□□ -1.27
CDKL3-209ENST00000523054 CFAP65Q6ZU64 1925 aaKnown RBP7.09□□□□□ -1.27
CDKL3-209ENST00000523054 DHX29Q7Z478 1369 aaKnown RBP7.09□□□□□ -1.27
CDKL3-209ENST00000523054 GRIN3BO60391 1043 aa7.09□□□□□ -1.27
CDKL3-209ENST00000523054 UBTFP17480 764 aaKnown RBP7.09□□□□□ -1.27
CDKL3-209ENST00000523054 PDE4AP27815 886 aa7.09□□□□□ -1.27
CDKL3-209ENST00000523054 DSG2Q14126 1118 aa7.09□□□□□ -1.27
CDKL3-209ENST00000523054 ZNF454Q8N9F8 522 aa7.09□□□□□ -1.27
CDKL3-209ENST00000523054 ABCC5O15440 1437 aa7.09□□□□□ -1.27
CDKL3-209ENST00000523054 SOS2Q07890 1332 aaPredicted RBP7.08□□□□□ -1.28
CDKL3-209ENST00000523054 PIK3C2BO00750 1634 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 PTPREP23469 700 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 HTRA3P83110 453 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 FAM182BQ5T319 152 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 LARP6Q9BRS8 491 aaKnown RBP7.08□□□□□ -1.28
CDKL3-209ENST00000523054 ADCY9O60503 1353 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 TOMM70O94826 608 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 OXER1Q8TDS5 423 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 NBPF3Q9H094 633 aa7.08□□□□□ -1.28
CDKL3-209ENST00000523054 ADGRB3O60242 1522 aa7.07□□□□□ -1.28
CDKL3-209ENST00000523054 EFCAB6Q5THR3 1501 aa7.07□□□□□ -1.28
CDKL3-209ENST00000523054 PITPNM2Q9BZ72 1349 aa7.07□□□□□ -1.28
CDKL3-209ENST00000523054 NEXMIFQ5QGS0 1516 aa7.07□□□□□ -1.28
CDKL3-209ENST00000523054 DLL1O00548 723 aa7.07□□□□□ -1.28
CDKL3-209ENST00000523054 ABHD8Q96I13 439 aa7.07□□□□□ -1.28
CDKL3-209ENST00000523054 CDC42BPAQ5VT25 1732 aa7.06□□□□□ -1.28
CDKL3-209ENST00000523054 NWD2Q9ULI1 1742 aa7.06□□□□□ -1.28
CDKL3-209ENST00000523054 FOSBP53539 338 aa7.06□□□□□ -1.28
CDKL3-209ENST00000523054 KCNV2Q8TDN2 545 aa7.06□□□□□ -1.28
CDKL3-209ENST00000523054 ZNF777Q9ULD5 760 aaPredicted RBP7.06□□□□□ -1.28
CDKL3-209ENST00000523054 LAPTM4AQ15012 233 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms