RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 WDR4P57081 412 aaKnown RBP8.31□□□□□ -1.08
SKP1-210ENST00000522855 NR5A1Q13285 461 aa8.31□□□□□ -1.08
SKP1-210ENST00000522855 GPKOWQ92917 476 aaPredicted RBP eCLIP8.31□□□□□ -1.08
SKP1-210ENST00000522855 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
SKP1-210ENST00000522855 POM121Q96HA1 1249 aa8.3□□□□□ -1.08
SKP1-210ENST00000522855 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
SKP1-210ENST00000522855 MRPL14Q6P1L8 145 aaKnown RBP8.29□□□□□ -1.08
SKP1-210ENST00000522855 ITPKCQ96DU7 683 aa8.29□□□□□ -1.08
SKP1-210ENST00000522855 ZFAND3Q9H8U3 227 aa8.29□□□□□ -1.08
SKP1-210ENST00000522855 NDUFB9Q9Y6M9 179 aa8.29□□□□□ -1.08
SKP1-210ENST00000522855 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
SKP1-210ENST00000522855 OCSTAMPQ9BR26 566 aa8.28□□□□□ -1.08
SKP1-210ENST00000522855 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
SKP1-210ENST00000522855 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
SKP1-210ENST00000522855 ARID5BQ14865 1188 aa8.27□□□□□ -1.09
SKP1-210ENST00000522855 AGERQ15109 404 aa8.27□□□□□ -1.09
SKP1-210ENST00000522855 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
SKP1-210ENST00000522855 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
SKP1-210ENST00000522855 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
SKP1-210ENST00000522855 FSHRP23945 695 aa8.26□□□□□ -1.09
SKP1-210ENST00000522855 ABL2P42684 1182 aa8.26□□□□□ -1.09
SKP1-210ENST00000522855 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
SKP1-210ENST00000522855 MEIOBQ8N635 442 aa8.26□□□□□ -1.09
SKP1-210ENST00000522855 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
SKP1-210ENST00000522855 TBC1D2BQ9UPU7 963 aa8.26□□□□□ -1.09
SKP1-210ENST00000522855 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
SKP1-210ENST00000522855 NR6A1Q15406 480 aa8.25□□□□□ -1.09
SKP1-210ENST00000522855 HOMEZQ8IX15 550 aa8.25□□□□□ -1.09
SKP1-210ENST00000522855 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
SKP1-210ENST00000522855 HMX1Q9NP08 348 aaPredicted RBP8.25□□□□□ -1.09
SKP1-210ENST00000522855 NXF1Q9UBU9 619 aaKnown RBP8.25□□□□□ -1.09
SKP1-210ENST00000522855 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
SKP1-210ENST00000522855 MAGEB6P1A0A0J9YX57 407 aa8.24□□□□□ -1.09
SKP1-210ENST00000522855 NPAS3Q8IXF0 933 aa8.24□□□□□ -1.09
SKP1-210ENST00000522855 PURBQ96QR8 312 aaKnown RBP8.24□□□□□ -1.09
SKP1-210ENST00000522855 H3BM21 787 aa8.23□□□□□ -1.09
SKP1-210ENST00000522855 EPS8L1Q8TE68 723 aa8.23□□□□□ -1.09
SKP1-210ENST00000522855 CARD14Q9BXL6 1004 aa8.23□□□□□ -1.09
SKP1-210ENST00000522855 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
SKP1-210ENST00000522855 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
SKP1-210ENST00000522855 VASH1Q7L8A9 365 aaPredicted RBP8.22□□□□□ -1.09
SKP1-210ENST00000522855 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
SKP1-210ENST00000522855 TRIM34Q9BYJ4 488 aa8.22□□□□□ -1.09
SKP1-210ENST00000522855 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
SKP1-210ENST00000522855 ARHGAP9Q9BRR9 750 aa8.21□□□□□ -1.1
SKP1-210ENST00000522855 ZNF777Q9ULD5 760 aaPredicted RBP8.21□□□□□ -1.1
SKP1-210ENST00000522855 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
SKP1-210ENST00000522855 SCARF1Q14162 830 aa8.2□□□□□ -1.1
SKP1-210ENST00000522855 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
SKP1-210ENST00000522855 ARID3AQ99856 593 aa8.2□□□□□ -1.1
SKP1-210ENST00000522855 SERPINA10Q9UK55 444 aa8.2□□□□□ -1.1
SKP1-210ENST00000522855 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
SKP1-210ENST00000522855 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
SKP1-210ENST00000522855 CCDC82Q8N4S0 544 aa8.19□□□□□ -1.1
SKP1-210ENST00000522855 EMILIN1Q9Y6C2 1016 aa8.19□□□□□ -1.1
SKP1-210ENST00000522855 ERBB4Q15303 1308 aa8.19□□□□□ -1.1
SKP1-210ENST00000522855 VSIG8P0DPA2 414 aa8.18□□□□□ -1.1
SKP1-210ENST00000522855 VEGFBP49765 207 aa8.18□□□□□ -1.1
SKP1-210ENST00000522855 SLC10A4Q96EP9 437 aa8.18□□□□□ -1.1
SKP1-210ENST00000522855 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
SKP1-210ENST00000522855 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
SKP1-210ENST00000522855 Q6ZVU0 165 aa8.17□□□□□ -1.1
SKP1-210ENST00000522855 ADAM32Q8TC27 787 aa8.17□□□□□ -1.1
SKP1-210ENST00000522855 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
SKP1-210ENST00000522855 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
SKP1-210ENST00000522855 GMPRP36959 345 aa8.16□□□□□ -1.1
SKP1-210ENST00000522855 IRF5Q13568 498 aa8.16□□□□□ -1.1
SKP1-210ENST00000522855 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
SKP1-210ENST00000522855 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
SKP1-210ENST00000522855 SLC16A10Q8TF71 515 aa8.16□□□□□ -1.1
SKP1-210ENST00000522855 CALR3Q96L12 384 aaKnown RBP8.16□□□□□ -1.1
SKP1-210ENST00000522855 DNMT3LQ9UJW3 386 aa8.16□□□□□ -1.1
SKP1-210ENST00000522855 GPR37L1O60883 481 aa8.15□□□□□ -1.1
SKP1-210ENST00000522855 INSM1Q01101 510 aaPredicted RBP8.15□□□□□ -1.1
SKP1-210ENST00000522855 PTK2Q05397 1052 aa8.15□□□□□ -1.1
SKP1-210ENST00000522855 IRF7Q92985 503 aa8.15□□□□□ -1.1
SKP1-210ENST00000522855 GLMNQ92990 594 aa8.15□□□□□ -1.1
SKP1-210ENST00000522855 STK17AQ9UEE5 414 aa8.15□□□□□ -1.1
SKP1-210ENST00000522855 BMP2P12643 396 aa8.14□□□□□ -1.11
SKP1-210ENST00000522855 SOX11P35716 441 aa8.14□□□□□ -1.11
SKP1-210ENST00000522855 ZBTB33Q86T24 672 aa8.14□□□□□ -1.11
SKP1-210ENST00000522855 TSEN34Q9BSV6 310 aaKnown RBP8.14□□□□□ -1.11
SKP1-210ENST00000522855 CBLBQ13191 982 aa8.13□□□□□ -1.11
SKP1-210ENST00000522855 POM121CA8CG34 1229 aa8.12□□□□□ -1.11
SKP1-210ENST00000522855 ESPNB1AK53 854 aa8.12□□□□□ -1.11
SKP1-210ENST00000522855 SPINT1O43278 529 aa8.12□□□□□ -1.11
SKP1-210ENST00000522855 VAC14Q08AM6 782 aa8.12□□□□□ -1.11
SKP1-210ENST00000522855 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
SKP1-210ENST00000522855 MAN1A2O60476 641 aa8.11□□□□□ -1.11
SKP1-210ENST00000522855 UPP2O95045 317 aa8.11□□□□□ -1.11
SKP1-210ENST00000522855 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
SKP1-210ENST00000522855 ZNF592Q92610 1267 aa8.11□□□□□ -1.11
SKP1-210ENST00000522855 EIF4G2P78344 907 aaKnown RBP eCLIP8.1□□□□□ -1.11
SKP1-210ENST00000522855 NR1H3Q13133 447 aa8.1□□□□□ -1.11
SKP1-210ENST00000522855 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
SKP1-210ENST00000522855 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
SKP1-210ENST00000522855 LILRA1O75019 489 aa8.09□□□□□ -1.11
SKP1-210ENST00000522855 PPFIA3O75145 1194 aa8.09□□□□□ -1.11
SKP1-210ENST00000522855 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
SKP1-210ENST00000522855 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms