RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ARHGAP31Q2M1Z3 1444 aa9.96□□□□□ -0.82
HMGB4-204ENST00000522796 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
HMGB4-204ENST00000522796 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.82
HMGB4-204ENST00000522796 MAF1Q9H063 256 aa9.96□□□□□ -0.82
HMGB4-204ENST00000522796 RANBP17Q9H2T7 1088 aaKnown RBP9.96□□□□□ -0.82
HMGB4-204ENST00000522796 PPME1Q9Y570 386 aa9.96□□□□□ -0.82
HMGB4-204ENST00000522796 CECR2Q9BXF3 1484 aa9.96□□□□□ -0.82
HMGB4-204ENST00000522796 ABCC8Q09428 1581 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 SETD5Q9C0A6 1442 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 DDIT3P35638 169 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 SART3Q15020 963 aaKnown RBP9.95□□□□□ -0.82
HMGB4-204ENST00000522796 C20orf194Q5TEA3 1177 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 CEP126Q9P2H0 1117 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 KANK1Q14678 1352 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 MAP2K2P36507 400 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 NCBP1Q09161 790 aaKnown RBP9.95□□□□□ -0.82
HMGB4-204ENST00000522796 NEXNQ0ZGT2 675 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 TTC31Q49AM3 519 aaPredicted RBP9.95□□□□□ -0.82
HMGB4-204ENST00000522796 GORABQ5T7V8 394 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 SYT10Q6XYQ8 523 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
HMGB4-204ENST00000522796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMGB4-204ENST00000522796 NOM1Q5C9Z4 860 aaKnown RBP9.94□□□□□ -0.82
HMGB4-204ENST00000522796 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 NFATC2IPQ8NCF5 419 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 ANKRD20A12PQ8NF67 263 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 HELBQ8NG08 1087 aaPredicted RBP9.94□□□□□ -0.82
HMGB4-204ENST00000522796 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.94□□□□□ -0.82
HMGB4-204ENST00000522796 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
HMGB4-204ENST00000522796 NEFHP12036 1026 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 MFSD4BQ5TF39 518 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
HMGB4-204ENST00000522796 SKILP12757 684 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 NAT1P18440 290 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 NAP1L1P55209 391 aaKnown RBP9.93□□□□□ -0.82
HMGB4-204ENST00000522796 INHBEP58166 350 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 MCTP2Q6DN12 878 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 KLHL23Q8NBE8 558 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 CEP89Q96ST8 783 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 CWC15Q9P013 229 aaKnown RBP9.93□□□□□ -0.82
HMGB4-204ENST00000522796 TRIM66O15016 1216 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 SEC24BO95487 1268 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 ZSCAN26Q16670 478 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 MORC1Q86VD1 984 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 RBSNQ9H1K0 784 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 RPGRIP1LQ68CZ1 1315 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 RAD54L2Q9Y4B4 1467 aa9.93□□□□□ -0.82
HMGB4-204ENST00000522796 PES1O00541 588 aaKnown RBP9.92□□□□□ -0.82
HMGB4-204ENST00000522796 ARPC5LQ9BPX5 153 aa9.92□□□□□ -0.82
HMGB4-204ENST00000522796 CAND2O75155 1236 aa9.92□□□□□ -0.82
HMGB4-204ENST00000522796 JAKMIP3Q5VZ66 844 aa9.92□□□□□ -0.82
HMGB4-204ENST00000522796 SUGT1Q9Y2Z0 365 aa9.92□□□□□ -0.82
HMGB4-204ENST00000522796 ZMYM3Q14202 1370 aa9.92□□□□□ -0.82
HMGB4-204ENST00000522796 NCOA1Q15788 1441 aa9.92□□□□□ -0.82
HMGB4-204ENST00000522796 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
HMGB4-204ENST00000522796 IRX1P78414 480 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-204ENST00000522796 RAB3GAP1Q15042 981 aa9.91□□□□□ -0.82
HMGB4-204ENST00000522796 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
HMGB4-204ENST00000522796 SRLQ86TD4 932 aa9.91□□□□□ -0.82
HMGB4-204ENST00000522796 KIF1BPQ96EK5 621 aa9.91□□□□□ -0.82
HMGB4-204ENST00000522796 MAPK8IP3Q9UPT6 1336 aa9.91□□□□□ -0.82
HMGB4-204ENST00000522796 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
HMGB4-204ENST00000522796 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-204ENST00000522796 CCDC7Q96M83 1385 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 PPFIA4O75335 1185 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 KIF4AO95239 1232 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 RABEP1Q15276 862 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 CLEC17AQ6ZS10 378 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 TACO1Q9BSH4 297 aaKnown RBP9.9□□□□□ -0.82
HMGB4-204ENST00000522796 PLEKHG2Q9H7P9 1386 aa9.9□□□□□ -0.82
HMGB4-204ENST00000522796 SMAPO00193 183 aa9.9□□□□□ -0.83
HMGB4-204ENST00000522796 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.83
HMGB4-204ENST00000522796 LONRF3Q496Y0 759 aa9.9□□□□□ -0.83
HMGB4-204ENST00000522796 PACS2Q86VP3 889 aa9.9□□□□□ -0.83
HMGB4-204ENST00000522796 SYNPO2Q9UMS6 1093 aa9.9□□□□□ -0.83
HMGB4-204ENST00000522796 ZNF232Q9UNY5 417 aa9.9□□□□□ -0.83
HMGB4-204ENST00000522796 MAGEA9P43362 315 aa9.89□□□□□ -0.83
HMGB4-204ENST00000522796 IRAK4Q9NWZ3 460 aa9.89□□□□□ -0.83
HMGB4-204ENST00000522796 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
HMGB4-204ENST00000522796 ANKRD18BA2A2Z9 1011 aa9.89□□□□□ -0.83
HMGB4-204ENST00000522796 LRPPRCP42704 1394 aaKnown RBP9.88□□□□□ -0.83
HMGB4-204ENST00000522796 CTTNBP2Q8WZ74 1663 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 ZSCAN23Q3MJ62 389 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 ZNF397Q8NF99 534 aaPredicted RBP9.88□□□□□ -0.83
HMGB4-204ENST00000522796 ETAA1Q9NY74 926 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 PNMA2Q9UL42 364 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 APBB1O00213 710 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 E2F4Q16254 413 aa9.88□□□□□ -0.83
HMGB4-204ENST00000522796 ZNF396Q96N95 335 aaPredicted RBP9.88□□□□□ -0.83
HMGB4-204ENST00000522796 ROCK2O75116 1388 aaKnown RBP9.87□□□□□ -0.83
HMGB4-204ENST00000522796 ECEL1O95672 775 aa9.87□□□□□ -0.83
HMGB4-204ENST00000522796 CDC37Q16543 378 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms