RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 KANK4Q5T7N3 995 aaPredicted RBP10.95□□□□□ -0.66
PCM1-216ENST00000522777 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
PCM1-216ENST00000522777 BAP1Q92560 729 aa10.95□□□□□ -0.66
PCM1-216ENST00000522777 USTQ9Y2C2 406 aa10.95□□□□□ -0.66
PCM1-216ENST00000522777 USP17L3A6NCW0 530 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 USP17L4A6NCW7 530 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 USP17L5A8MUK1 530 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 USP17L1Q7RTZ2 530 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 ZNF592Q92610 1267 aa10.94□□□□□ -0.66
PCM1-216ENST00000522777 SKIP12755 728 aa10.93□□□□□ -0.66
PCM1-216ENST00000522777 LINC01559Q495D7 138 aa10.93□□□□□ -0.66
PCM1-216ENST00000522777 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
PCM1-216ENST00000522777 ZNF511Q8NB15 262 aa10.93□□□□□ -0.66
PCM1-216ENST00000522777 FOXJ1Q92949 421 aa10.93□□□□□ -0.66
PCM1-216ENST00000522777 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
PCM1-216ENST00000522777 ZBTB33Q86T24 672 aa10.92□□□□□ -0.66
PCM1-216ENST00000522777 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
PCM1-216ENST00000522777 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 C1QTNF2Q9BXJ5 285 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 CARD14Q9BXL6 1004 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 HCSTQ9UBK5 93 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 CFTRP13569 1480 aa10.91□□□□□ -0.66
PCM1-216ENST00000522777 MAGEB6P1A0A0J9YX57 407 aa10.9□□□□□ -0.66
PCM1-216ENST00000522777 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
PCM1-216ENST00000522777 PDE4CQ08493 712 aa10.9□□□□□ -0.66
PCM1-216ENST00000522777 RNF135Q8IUD6 432 aa10.9□□□□□ -0.66
PCM1-216ENST00000522777 DEPDC4Q8N2C3 294 aa10.9□□□□□ -0.66
PCM1-216ENST00000522777 PLPP7Q8NBV4 271 aa10.9□□□□□ -0.66
PCM1-216ENST00000522777 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.66
PCM1-216ENST00000522777 VRTNQ9H8Y1 702 aa10.9□□□□□ -0.66
PCM1-216ENST00000522777 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
PCM1-216ENST00000522777 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
PCM1-216ENST00000522777 KCNC4Q03721 635 aa10.89□□□□□ -0.67
PCM1-216ENST00000522777 BPHLQ86WA6 291 aaPredicted RBP10.89□□□□□ -0.67
PCM1-216ENST00000522777 CARNS1A5YM72 827 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 SH3BP2P78314 561 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 NCOA4Q13772 614 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 DZIP3Q86Y13 1208 aaKnown RBP10.88□□□□□ -0.67
PCM1-216ENST00000522777 ZMIZ1Q9ULJ6 1067 aa10.88□□□□□ -0.67
PCM1-216ENST00000522777 ELOAQ14241 798 aaKnown RBP10.87□□□□□ -0.67
PCM1-216ENST00000522777 WIZO95785 1651 aa10.86□□□□□ -0.67
PCM1-216ENST00000522777 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
PCM1-216ENST00000522777 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
PCM1-216ENST00000522777 AGERQ15109 404 aa10.85□□□□□ -0.67
PCM1-216ENST00000522777 MAP7D1Q3KQU3 841 aa10.85□□□□□ -0.67
PCM1-216ENST00000522777 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
PCM1-216ENST00000522777 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
PCM1-216ENST00000522777 TRMT44Q8IYL2 757 aaKnown RBP10.85□□□□□ -0.67
PCM1-216ENST00000522777 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
PCM1-216ENST00000522777 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
PCM1-216ENST00000522777 IFT140Q96RY7 1462 aa10.85□□□□□ -0.67
PCM1-216ENST00000522777 FAM196BA6NMK8 535 aa10.84□□□□□ -0.67
PCM1-216ENST00000522777 LZTS3O60299 673 aaPredicted RBP10.84□□□□□ -0.67
PCM1-216ENST00000522777 GIGYF1O75420 1035 aaPredicted RBP10.84□□□□□ -0.67
PCM1-216ENST00000522777 TRIM32Q13049 653 aa10.84□□□□□ -0.67
PCM1-216ENST00000522777 CRTC2Q53ET0 693 aaPredicted RBP10.84□□□□□ -0.67
PCM1-216ENST00000522777 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
PCM1-216ENST00000522777 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
PCM1-216ENST00000522777 ESPNB1AK53 854 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L15C9J2P7 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L10C9JJH3 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L13C9JLJ4 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L12C9JPN9 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L11C9JVI0 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L21D6R901 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L18D6R9N7 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L22D6RA61 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L17D6RBQ6 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L19D6RCP7 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L20D6RJB6 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 USP17L24Q0WX57 530 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 STK32AQ8WU08 396 aa10.83□□□□□ -0.68
PCM1-216ENST00000522777 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
PCM1-216ENST00000522777 SKOR1P84550 965 aa10.82□□□□□ -0.68
PCM1-216ENST00000522777 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
PCM1-216ENST00000522777 ATP5J2-PTCD1G3V325 749 aa10.81□□□□□ -0.68
PCM1-216ENST00000522777 BRD1O95696 1058 aa10.81□□□□□ -0.68
PCM1-216ENST00000522777 PTK7Q13308 1070 aa10.81□□□□□ -0.68
PCM1-216ENST00000522777 TMEM164Q5U3C3 297 aa10.81□□□□□ -0.68
PCM1-216ENST00000522777 EML3Q32P44 896 aa10.8□□□□□ -0.68
PCM1-216ENST00000522777 PPP1R18Q6NYC8 613 aa10.8□□□□□ -0.68
PCM1-216ENST00000522777 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
PCM1-216ENST00000522777 DOLKQ9UPQ8 538 aa10.8□□□□□ -0.68
PCM1-216ENST00000522777 ZBTB24O43167 697 aaPredicted RBP10.79□□□□□ -0.68
PCM1-216ENST00000522777 GGCXP38435 758 aa10.79□□□□□ -0.68
PCM1-216ENST00000522777 WNT7BP56706 349 aa10.79□□□□□ -0.68
PCM1-216ENST00000522777 NBPF20Q3BBV1 942 aa10.79□□□□□ -0.68
PCM1-216ENST00000522777 RSF1Q96T23 1441 aaPredicted RBP10.78□□□□□ -0.68
PCM1-216ENST00000522777 RASA1P20936 1047 aa10.78□□□□□ -0.68
PCM1-216ENST00000522777 CLDN10P78369 228 aa10.78□□□□□ -0.68
PCM1-216ENST00000522777 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
PCM1-216ENST00000522777 RPIAP49247 311 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms