RNA–Protein interactions for RNA: ENST00000522344.1

CPEB4-210, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 2

Gene CPEB4, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-210ENST00000522344 KCTD15Q96SI1 283 aaPredicted RBP9.22□□□□□ -0.93
CPEB4-210ENST00000522344 PCDHB9Q9Y5E1 797 aa9.22□□□□□ -0.93
CPEB4-210ENST00000522344 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
CPEB4-210ENST00000522344 NR1H3Q13133 447 aa9.21□□□□□ -0.94
CPEB4-210ENST00000522344 CRIPAKQ8N1N5 446 aa9.21□□□□□ -0.94
CPEB4-210ENST00000522344 DACH1Q9UI36 760 aa9.21□□□□□ -0.94
CPEB4-210ENST00000522344 CDV3Q9UKY7 258 aaKnown RBP9.21□□□□□ -0.94
CPEB4-210ENST00000522344 GPR37L1O60883 481 aa9.2□□□□□ -0.94
CPEB4-210ENST00000522344 LOC100996750A0A140TA64 210 aa9.19□□□□□ -0.94
CPEB4-210ENST00000522344 ZIC2O95409 532 aaPredicted RBP9.19□□□□□ -0.94
CPEB4-210ENST00000522344 FLIIQ13045 1269 aa9.19□□□□□ -0.94
CPEB4-210ENST00000522344 NBPF20Q3BBV1 942 aa9.19□□□□□ -0.94
CPEB4-210ENST00000522344 CCDC116Q8IYX3 515 aa9.19□□□□□ -0.94
CPEB4-210ENST00000522344 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
CPEB4-210ENST00000522344 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
CPEB4-210ENST00000522344 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
CPEB4-210ENST00000522344 TIMP2P16035 220 aa9.18□□□□□ -0.94
CPEB4-210ENST00000522344 ITPKCQ96DU7 683 aa9.18□□□□□ -0.94
CPEB4-210ENST00000522344 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
CPEB4-210ENST00000522344 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
CPEB4-210ENST00000522344 RAD21O60216 631 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 BMP1P13497 986 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 VAC14Q08AM6 782 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 IRF5Q13568 498 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
CPEB4-210ENST00000522344 POM121Q96HA1 1249 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
CPEB4-210ENST00000522344 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
CPEB4-210ENST00000522344 GMPR2Q9P2T1 348 aaKnown RBP9.15□□□□□ -0.94
CPEB4-210ENST00000522344 EMILIN1Q9Y6C2 1016 aa9.15□□□□□ -0.94
CPEB4-210ENST00000522344 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
CPEB4-210ENST00000522344 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
CPEB4-210ENST00000522344 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
CPEB4-210ENST00000522344 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
CPEB4-210ENST00000522344 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.953e-7■■■□□ 17
CPEB4-210ENST00000522344 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
CPEB4-210ENST00000522344 TMPRSS4Q9NRS4 437 aa9.12□□□□□ -0.95
CPEB4-210ENST00000522344 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
CPEB4-210ENST00000522344 ERVH48-1M5A8F1 160 aa9.11□□□□□ -0.95
CPEB4-210ENST00000522344 WFS1O76024 890 aa9.11□□□□□ -0.95
CPEB4-210ENST00000522344 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
CPEB4-210ENST00000522344 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
CPEB4-210ENST00000522344 TRIM46Q7Z4K8 759 aa9.11□□□□□ -0.95
CPEB4-210ENST00000522344 WWC1Q8IX03 1113 aa9.11□□□□□ -0.95
CPEB4-210ENST00000522344 ESPNB1AK53 854 aa9.1□□□□□ -0.95
CPEB4-210ENST00000522344 WIPF1O43516 503 aa9.1□□□□□ -0.95
CPEB4-210ENST00000522344 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
CPEB4-210ENST00000522344 CBLBQ13191 982 aa9.1□□□□□ -0.95
CPEB4-210ENST00000522344 C6orf118Q5T5N4 469 aa9.1□□□□□ -0.95
CPEB4-210ENST00000522344 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
CPEB4-210ENST00000522344 UPP2O95045 317 aa9.09□□□□□ -0.95
CPEB4-210ENST00000522344 SCARF1Q14162 830 aa9.09□□□□□ -0.95
CPEB4-210ENST00000522344 SENP2Q9HC62 589 aa9.09□□□□□ -0.95
CPEB4-210ENST00000522344 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
CPEB4-210ENST00000522344 SEPT12Q8IYM1 358 aa9.08□□□□□ -0.96
CPEB4-210ENST00000522344 ZNF784Q8NCA9 323 aaPredicted RBP9.08□□□□□ -0.96
CPEB4-210ENST00000522344 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
CPEB4-210ENST00000522344 ZFP42Q96MM3 310 aa9.08□□□□□ -0.96
CPEB4-210ENST00000522344 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
CPEB4-210ENST00000522344 BMP2P12643 396 aa9.07□□□□□ -0.96
CPEB4-210ENST00000522344 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
CPEB4-210ENST00000522344 SEMA3FQ13275 785 aa9.07□□□□□ -0.96
CPEB4-210ENST00000522344 MEIOBQ8N635 442 aa9.07□□□□□ -0.96
CPEB4-210ENST00000522344 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
CPEB4-210ENST00000522344 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
CPEB4-210ENST00000522344 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
CPEB4-210ENST00000522344 SNRPBP14678 240 aaKnown RBP9.05□□□□□ -0.96
CPEB4-210ENST00000522344 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
CPEB4-210ENST00000522344 SLFNL1Q499Z3 407 aa9.05□□□□□ -0.96
CPEB4-210ENST00000522344 KIFC2Q96AC6 838 aa9.05□□□□□ -0.96
CPEB4-210ENST00000522344 TRIM47Q96LD4 638 aa9.05□□□□□ -0.96
CPEB4-210ENST00000522344 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
CPEB4-210ENST00000522344 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
CPEB4-210ENST00000522344 RELBQ01201 579 aa9.04□□□□□ -0.96
CPEB4-210ENST00000522344 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
CPEB4-210ENST00000522344 Q6ZVU0 165 aa9.03□□□□□ -0.96
CPEB4-210ENST00000522344 ESF1Q9H501 851 aaKnown RBP9.03□□□□□ -0.96
CPEB4-210ENST00000522344 LILRA1O75019 489 aa9.02□□□□□ -0.97
CPEB4-210ENST00000522344 RNF135Q8IUD6 432 aa9.02□□□□□ -0.97
CPEB4-210ENST00000522344 TRIM52Q96A61 297 aa9.02□□□□□ -0.97
CPEB4-210ENST00000522344 ZNF395Q9H8N7 513 aaPredicted RBP9.02□□□□□ -0.97
CPEB4-210ENST00000522344 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
CPEB4-210ENST00000522344 SOX11P35716 441 aa9.01□□□□□ -0.97
CPEB4-210ENST00000522344 CCDC125Q86Z20 511 aa9.01□□□□□ -0.97
CPEB4-210ENST00000522344 CCDC85AQ96PX6 553 aaPredicted RBP9.01□□□□□ -0.97
CPEB4-210ENST00000522344 SOBPA7XYQ1 873 aa9□□□□□ -0.97
CPEB4-210ENST00000522344 ADH1AP07327 375 aa9□□□□□ -0.97
CPEB4-210ENST00000522344 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
CPEB4-210ENST00000522344 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
CPEB4-210ENST00000522344 PROSER2Q86WR7 435 aaPredicted RBP9□□□□□ -0.97
CPEB4-210ENST00000522344 CDCA7Q9BWT1 371 aaPredicted RBP9□□□□□ -0.97
CPEB4-210ENST00000522344 SCTRP47872 440 aa8.99□□□□□ -0.97
CPEB4-210ENST00000522344 DOLKQ9UPQ8 538 aa8.99□□□□□ -0.97
CPEB4-210ENST00000522344 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
CPEB4-210ENST00000522344 MAN1A2O60476 641 aa8.98□□□□□ -0.97
CPEB4-210ENST00000522344 ERVK-9P63128 1117 aa8.98□□□□□ -0.97
CPEB4-210ENST00000522344 OXLD1Q5BKU9 147 aa8.98□□□□□ -0.97
CPEB4-210ENST00000522344 ATP5J2-PTCD1G3V325 749 aa8.97□□□□□ -0.97
CPEB4-210ENST00000522344 MYCP01106 439 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms