RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHPRH-209ENST00000521977 PSME1Q06323 249 aa12.74□□□□□ -0.37
SHPRH-209ENST00000521977 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
SHPRH-209ENST00000521977 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
SHPRH-209ENST00000521977 CDK12Q9NYV4 1490 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-209ENST00000521977 FOXO3O43524 673 aa12.73□□□□□ -0.37
SHPRH-209ENST00000521977 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHPRH-209ENST00000521977 ZBED9Q6R2W3 1325 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 FBLN1P23142 703 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 KRT28Q7Z3Y7 464 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 PXDNQ92626 1479 aa12.72□□□□□ -0.37
SHPRH-209ENST00000521977 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
SHPRH-209ENST00000521977 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
SHPRH-209ENST00000521977 NLRP6P59044 892 aa12.71□□□□□ -0.37
SHPRH-209ENST00000521977 ABTB2Q8N961 1025 aa12.71□□□□□ -0.37
SHPRH-209ENST00000521977 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.37
SHPRH-209ENST00000521977 SLIT3O75094 1523 aa12.7□□□□□ -0.38
SHPRH-209ENST00000521977 USP19O94966 1318 aa12.69□□□□□ -0.38
SHPRH-209ENST00000521977 NFAT5O94916 1531 aa12.69□□□□□ -0.38
SHPRH-209ENST00000521977 PEAK1Q9H792 1746 aa12.69□□□□□ -0.38
SHPRH-209ENST00000521977 RRS1Q15050 365 aaKnown RBP12.69□□□□□ -0.38
SHPRH-209ENST00000521977 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
SHPRH-209ENST00000521977 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
SHPRH-209ENST00000521977 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
SHPRH-209ENST00000521977 MAP3K19Q56UN5 1328 aa12.67□□□□□ -0.38
SHPRH-209ENST00000521977 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
SHPRH-209ENST00000521977 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
SHPRH-209ENST00000521977 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
SHPRH-209ENST00000521977 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
SHPRH-209ENST00000521977 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
SHPRH-209ENST00000521977 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-209ENST00000521977 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
SHPRH-209ENST00000521977 IL13P35225 146 aa12.66□□□□□ -0.38
SHPRH-209ENST00000521977 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
SHPRH-209ENST00000521977 KCNH5Q8NCM2 988 aa12.66□□□□□ -0.38
SHPRH-209ENST00000521977 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
SHPRH-209ENST00000521977 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
SHPRH-209ENST00000521977 MED1Q15648 1581 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-209ENST00000521977 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-209ENST00000521977 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
SHPRH-209ENST00000521977 FLT4P35916 1363 aa12.65□□□□□ -0.38
SHPRH-209ENST00000521977 IQSEC2Q5JU85 1478 aa12.65□□□□□ -0.38
SHPRH-209ENST00000521977 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
SHPRH-209ENST00000521977 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
SHPRH-209ENST00000521977 CRYBG1Q9Y4K1 1723 aa12.64□□□□□ -0.39
SHPRH-209ENST00000521977 ARHGEF10O15013 1369 aa12.64□□□□□ -0.39
SHPRH-209ENST00000521977 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
SHPRH-209ENST00000521977 GCP02774 474 aa12.63□□□□□ -0.39
SHPRH-209ENST00000521977 U2AF1L5P0DN76 240 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-209ENST00000521977 U2AF1Q01081 240 aaKnown RBP eCLIP12.63□□□□□ -0.39
SHPRH-209ENST00000521977 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
SHPRH-209ENST00000521977 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
SHPRH-209ENST00000521977 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
SHPRH-209ENST00000521977 LTN1O94822 1766 aa12.63□□□□□ -0.39
SHPRH-209ENST00000521977 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
SHPRH-209ENST00000521977 SOX12O15370 315 aa12.62□□□□□ -0.39
SHPRH-209ENST00000521977 HOXC9P31274 260 aa12.62□□□□□ -0.39
SHPRH-209ENST00000521977 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
SHPRH-209ENST00000521977 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
SHPRH-209ENST00000521977 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-209ENST00000521977 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
SHPRH-209ENST00000521977 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
SHPRH-209ENST00000521977 APAF1O14727 1248 aa12.61□□□□□ -0.39
SHPRH-209ENST00000521977 FCHSD2O94868 740 aa12.61□□□□□ -0.39
SHPRH-209ENST00000521977 AMPHP49418 695 aa12.61□□□□□ -0.39
SHPRH-209ENST00000521977 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
SHPRH-209ENST00000521977 RSPH6AQ9H0K4 717 aa12.61□□□□□ -0.39
SHPRH-209ENST00000521977 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
SHPRH-209ENST00000521977 IP6K1Q92551 441 aa12.6□□□□□ -0.39
SHPRH-209ENST00000521977 PNNQ9H307 717 aaKnown RBP12.6□□□□□ -0.39
SHPRH-209ENST00000521977 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-209ENST00000521977 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
SHPRH-209ENST00000521977 PHF12Q96QT6 1004 aa12.59□□□□□ -0.39
SHPRH-209ENST00000521977 ABCC6O95255 1503 aa12.58□□□□□ -0.4
SHPRH-209ENST00000521977 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
SHPRH-209ENST00000521977 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
SHPRH-209ENST00000521977 LHX8Q68G74 356 aa12.58□□□□□ -0.4
SHPRH-209ENST00000521977 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
SHPRH-209ENST00000521977 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
SHPRH-209ENST00000521977 CPDO75976 1380 aa12.57□□□□□ -0.4
SHPRH-209ENST00000521977 COL18A1P39060 1754 aa12.57□□□□□ -0.4
SHPRH-209ENST00000521977 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
SHPRH-209ENST00000521977 KDRP35968 1356 aa12.56□□□□□ -0.4
SHPRH-209ENST00000521977 TOM1O60784 492 aa12.56□□□□□ -0.4
SHPRH-209ENST00000521977 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
SHPRH-209ENST00000521977 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-209ENST00000521977 HMOX1P09601 288 aa12.55□□□□□ -0.4
SHPRH-209ENST00000521977 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
SHPRH-209ENST00000521977 EYA1Q99502 592 aa12.55□□□□□ -0.4
SHPRH-209ENST00000521977 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-209ENST00000521977 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
SHPRH-209ENST00000521977 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
SHPRH-209ENST00000521977 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
SHPRH-209ENST00000521977 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
SHPRH-209ENST00000521977 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
SHPRH-209ENST00000521977 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-209ENST00000521977 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms